RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 TRIM29Q14134 588 aa11.38□□□□□ -0.59
RTTN-202ENST00000578780 DACT2Q5SW24 774 aa11.38□□□□□ -0.59
RTTN-202ENST00000578780 CRACR2BQ8N4Y2 399 aaPredicted RBP11.38□□□□□ -0.59
RTTN-202ENST00000578780 WASF1Q92558 559 aa11.38□□□□□ -0.59
RTTN-202ENST00000578780 ZNF287Q9HBT7 754 aa11.38□□□□□ -0.59
RTTN-202ENST00000578780 USP40Q9NVE5 1235 aa11.38□□□□□ -0.59
RTTN-202ENST00000578780 USP17L3A6NCW0 530 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 USP17L4A6NCW7 530 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 GOLGA6L4A6NEF3 574 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 TADA3O75528 432 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 ZBTB7AO95365 584 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 KCNA3P22001 575 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 SNW1Q13573 536 aaKnown RBP11.37□□□□□ -0.59
RTTN-202ENST00000578780 ANO6Q4KMQ2 910 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 KRT40Q6A162 431 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 ATL3Q6DD88 541 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 HHIPL2Q6UWX4 724 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 USP17L1Q7RTZ2 530 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 KIAA0825Q8IV33 1275 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 SNED1Q8TER0 1413 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 FTOQ9C0B1 505 aaKnown RBP eCLIP11.37□□□□□ -0.59
RTTN-202ENST00000578780 IL17RBQ9NRM6 502 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 MPHOSPH10O00566 681 aaKnown RBP11.37□□□□□ -0.59
RTTN-202ENST00000578780 PPIP5K2O43314 1243 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 DDAH1O94760 285 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 GUCY1A2P33402 732 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 CRKP46108 304 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 CDK8P49336 464 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 FKBP1AP62942 108 aaKnown RBP11.37□□□□□ -0.59
RTTN-202ENST00000578780 KIF23Q02241 960 aaPredicted RBP11.37□□□□□ -0.59
RTTN-202ENST00000578780 RCSD1Q6JBY9 416 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 C16orf86Q6ZW13 317 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 USP28Q96RU2 1077 aa11.37□□□□□ -0.59
RTTN-202ENST00000578780 KIF28PB7ZC32 967 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 WDHD1O75717 1129 aaPredicted RBP11.36□□□□□ -0.59
RTTN-202ENST00000578780 DEXIO95424 95 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 RASA1P20936 1047 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 PAX7P23759 505 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 APOBEC3HQ6NTF7 200 aaKnown RBP11.36□□□□□ -0.59
RTTN-202ENST00000578780 CDC42EP5Q6NZY7 148 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 BRAPQ7Z569 592 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 DGKHQ86XP1 1220 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 KAT14Q9H8E8 782 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 NEBLO76041 1014 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 LIG1P18858 919 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 E4F1Q66K89 784 aaPredicted RBP11.36□□□□□ -0.59
RTTN-202ENST00000578780 RTKN2Q8IZC4 609 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 OTUD6BQ8N6M0 293 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 CTCFLQ8NI51 663 aaPredicted RBP11.36□□□□□ -0.59
RTTN-202ENST00000578780 TATDN2Q93075 761 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 DDX4Q9NQI0 724 aaKnown RBP11.36□□□□□ -0.59
RTTN-202ENST00000578780 VPS18Q9P253 973 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 RCOR1Q9UKL0 485 aa11.36□□□□□ -0.59
RTTN-202ENST00000578780 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
RTTN-202ENST00000578780 CDK5RAP2Q96SN8 1893 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 PLEKHA8P1O95397 391 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 RBM5P52756 815 aaKnown RBP eCLIP11.35□□□□□ -0.59
RTTN-202ENST00000578780 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
RTTN-202ENST00000578780 GNL2Q13823 731 aaKnown RBP11.35□□□□□ -0.59
RTTN-202ENST00000578780 CAMK4Q16566 473 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 MAP3K11Q16584 847 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 PGBD1Q96JS3 809 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 ZDHHC15Q96MV8 337 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 TACO1Q9BSH4 297 aaKnown RBP11.35□□□□□ -0.59
RTTN-202ENST00000578780 MRIQ9BWK5 157 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 RNF26Q9BY78 433 aaPredicted RBP11.35□□□□□ -0.59
RTTN-202ENST00000578780 PLEKHA4Q9H4M7 779 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 A1CFQ9NQ94 594 aaKnown RBP11.35□□□□□ -0.59
RTTN-202ENST00000578780 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 MAP2K7O14733 419 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 ERLIN2O94905 339 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 FUT2Q10981 343 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 MYSM1Q5VVJ2 828 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 ANKS1AQ92625 1134 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 PPP1R13BQ96KQ4 1090 aa11.35□□□□□ -0.59
RTTN-202ENST00000578780 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
RTTN-202ENST00000578780 YDJCA8MPS7 323 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 EFCAB8A8MWE9 144 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 ELF1P32519 619 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 IRX1P78414 480 aaPredicted RBP11.34□□□□□ -0.59
RTTN-202ENST00000578780 HDLBPQ00341 1268 aaKnown RBP11.34□□□□□ -0.59
RTTN-202ENST00000578780 TBC1D8BQ0IIM8 1120 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 FBXW10Q5XX13 1052 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 TMTC3Q6ZXV5 915 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 PNMA1Q8ND90 353 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 GIMAP7Q8NHV1 300 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 BICD2Q8TD16 824 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 JPH2Q9BR39 696 aaPredicted RBP11.34□□□□□ -0.59
RTTN-202ENST00000578780 ARFGAP3Q9NP61 516 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 RTEL1Q9NZ71 1219 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 STX8Q9UNK0 236 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 PCDHAC2Q9Y5I4 1007 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 V9GY48 417 aaPredicted RBP11.34□□□□□ -0.59
RTTN-202ENST00000578780 PRPF3O43395 683 aaKnown RBP11.34□□□□□ -0.59
RTTN-202ENST00000578780 POLD1P28340 1107 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms