RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 WDR78Q5VTH9 848 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 TRIM47Q96LD4 638 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 ARHGAP39Q9C0H5 1083 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 PNMA2Q9UL42 364 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 FRMPD2Q68DX3 1309 aaPredicted RBP13.46□□□□□ -0.25
ERBB2-208ENST00000578630 SH2B2O14492 632 aaPredicted RBP13.46□□□□□ -0.25
ERBB2-208ENST00000578630 STRNO43815 780 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 CALM1P0DP23 149 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 CALM2P0DP24 149 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 CALM3P0DP25 149 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 OAZ1P54368 228 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 ANAPC15P60006 121 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 SYDE2Q5VT97 1194 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 TTBK2Q6IQ55 1244 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 FBXO46Q6PJ61 603 aaPredicted RBP13.46□□□□□ -0.25
ERBB2-208ENST00000578630 POTEEQ6S8J3 1075 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 PLEKHH3Q7Z736 793 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 NCAPG2Q86XI2 1143 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 CPXCR1Q8N123 301 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 SHCBP1Q8NEM2 672 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 MOV10L1Q9BXT6 1211 aaKnown RBP13.46□□□□□ -0.25
ERBB2-208ENST00000578630 TM6SF1Q9BZW5 370 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 MROH8Q9H579 483 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 LY9Q9HBG7 655 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 SLC38A10Q9HBR0 1119 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 SRRDQ9UH36 339 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 PRR12Q9ULL5 1215 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 PTPN22Q9Y2R2 807 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 SLC12A7Q9Y666 1083 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 MYH4Q9Y623 1939 aa13.46□□□□□ -0.25
ERBB2-208ENST00000578630 LAMA4Q16363 1823 aa13.46□□□□□ -0.26
ERBB2-208ENST00000578630 ATP2A1O14983 1001 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 PEX10O60683 326 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 GOLGA8HP0CJ92 632 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 CASTP20810 708 aaKnown RBP13.45□□□□□ -0.26
ERBB2-208ENST00000578630 KIF5BP33176 963 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 SLC16A2P36021 539 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 GNAQP50148 359 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 RIOX2Q8IUF8 465 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 RAET1EQ8TD07 263 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 MAP3K14Q99558 947 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 NUDT12Q9BQG2 462 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 TEX13BQ9BXU2 312 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 MCOLN1Q9GZU1 580 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 PORCNQ9H237 461 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 CYP46A1Q9Y6A2 500 aa13.45□□□□□ -0.26
ERBB2-208ENST00000578630 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
ERBB2-208ENST00000578630 DDAH1O94760 285 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 SEC24BO95487 1268 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 ERCC3P19447 782 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 CTGFP29279 349 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 TROAPQ12815 778 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 C8orf34Q49A92 452 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 RUFY3Q7L099 469 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 GPR142Q7Z601 462 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 NBPF11Q86T75 865 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 SGMS1Q86VZ5 419 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 ZNF654Q8IZM8 581 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 TNS4Q8IZW8 715 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 REPS2Q8NFH8 660 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 CTCFLQ8NI51 663 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-208ENST00000578630 SOCS4Q8WXH5 440 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 UPF2Q9HAU5 1272 aaKnown RBP13.44□□□□□ -0.26
ERBB2-208ENST00000578630 SENP2Q9HC62 589 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 RAVER2Q9HCJ3 691 aaKnown RBP13.44□□□□□ -0.26
ERBB2-208ENST00000578630 ZSWIM6Q9HCJ5 1215 aa13.44□□□□□ -0.26
ERBB2-208ENST00000578630 ZNF214Q9UL59 606 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-208ENST00000578630 PALM3A6NDB9 673 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-208ENST00000578630 FCER1AP12319 257 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 RPS6KB1P23443 525 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 PTPREP23469 700 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 FLT3LGP49771 235 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 CAP1Q01518 475 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 GRM4Q14833 912 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 TKFCQ3LXA3 575 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 SNRNP48Q6IEG0 339 aaKnown RBP13.43□□□□□ -0.26
ERBB2-208ENST00000578630 CCDC174Q6PII3 467 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 Q6ZUG5 572 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 CHST13Q8NET6 341 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 TCEANC2Q96MN5 208 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 LZTS2Q9BRK4 669 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-208ENST00000578630 SLC5A4Q9NY91 659 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 FBXO40Q9UH90 709 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 GJD2Q9UKL4 321 aa13.43□□□□□ -0.26
ERBB2-208ENST00000578630 SLC15A5A6NIM6 579 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 SMARCA1P28370 1054 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 PRKCZQ05513 592 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 TRAF1Q13077 416 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 IRF5Q13568 498 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 RASGRP2Q7LDG7 609 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 DPP9Q86TI2 863 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms