RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 CCDC83Q8IWF9 413 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 CCDC82Q8N4S0 544 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 PIBF1Q8WXW3 757 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 GTF3C6Q969F1 213 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 TMX3Q96JJ7 454 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 SH2B1Q9NRF2 756 aaPredicted RBP14.12□□□□□ -0.15
IFT20-207ENST00000578547 FEM1BQ9UK73 627 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 CCDC196A0A1B0GTZ2 297 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 K7ELQ4 463 aaPredicted RBP14.11□□□□□ -0.15
IFT20-207ENST00000578547 CPLX1O14810 134 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 DTNBO60941 627 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 PPFIA3O75145 1194 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
IFT20-207ENST00000578547 SYDE2Q5VT97 1194 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 FAM160B2Q86V87 743 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 JMYQ8N9B5 988 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 CHURC1Q8WUH1 139 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 SNX21Q969T3 373 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 P2RX7Q99572 595 aaKnown RBP14.11□□□□□ -0.15
IFT20-207ENST00000578547 SLF1Q9BQI6 1058 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 ASCC2Q9H1I8 757 aaPredicted RBP14.11□□□□□ -0.15
IFT20-207ENST00000578547 FAM217BQ9NTX9 383 aaPredicted RBP14.11□□□□□ -0.15
IFT20-207ENST00000578547 RNF186Q9NXI6 227 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 SLC45A1Q9Y2W3 748 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 CEP350Q5VT06 3117 aa14.11□□□□□ -0.15
IFT20-207ENST00000578547 TRPA1O75762 1119 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 ALDH1A1P00352 501 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 CYP2C8P10632 490 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 OSBPP22059 807 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 ANP32AP39687 249 aaKnown RBP14.1□□□□□ -0.15
IFT20-207ENST00000578547 GNAQP50148 359 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 SNAP25P60880 206 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 TAF1CQ15572 869 aaPredicted RBP14.1□□□□□ -0.15
IFT20-207ENST00000578547 NBPF11Q86T75 865 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 HOMER1Q86YM7 354 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 SRBD1Q8N5C6 995 aaKnown RBP14.1□□□□□ -0.15
IFT20-207ENST00000578547 R3HDMLQ9H3Y0 253 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 VAT1LQ9HCJ6 419 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 ZCCHC17Q9NP64 241 aaKnown RBP14.1□□□□□ -0.15
IFT20-207ENST00000578547 WBP1LQ9NX94 342 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 PNMA3Q9UL41 463 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 PRR12Q9ULL5 1215 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 THSD7BQ9C0I4 1608 aa14.1□□□□□ -0.15
IFT20-207ENST00000578547 hCG_1642624A0A1W2PR95 340 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 TBC1D8O95759 1140 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 ST3GAL1Q11201 340 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 COG2Q14746 738 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 PPP2R5BQ15173 497 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 CPLX2Q6PUV4 134 aaKnown RBP14.09□□□□□ -0.15
IFT20-207ENST00000578547 ADGRF4Q8IZF3 695 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 PRPF38AQ8NAV1 312 aaKnown RBP14.09□□□□□ -0.15
IFT20-207ENST00000578547 SMCR8Q8TEV9 937 aaPredicted RBP14.09□□□□□ -0.15
IFT20-207ENST00000578547 PHKBQ93100 1093 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 ATG4CQ96DT6 458 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 LZTS2Q9BRK4 669 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 PPP1R9AQ9ULJ8 1098 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 CTDP1Q9Y5B0 961 aaPredicted RBP14.09□□□□□ -0.15
IFT20-207ENST00000578547 CNTNAP5Q8WYK1 1306 aa14.09□□□□□ -0.15
IFT20-207ENST00000578547 PARP14Q460N5 1801 aa14.08□□□□□ -0.15
IFT20-207ENST00000578547 SPDYE16A6NNV3 312 aaPredicted RBP14.08□□□□□ -0.16
IFT20-207ENST00000578547 CA12O43570 354 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 CDKL5O76039 1030 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 DSG3P32926 999 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 HERVK_113P62684 666 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 CRHR2Q13324 411 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 SLC35G1Q2M3R5 365 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 CCDC174Q6PII3 467 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 POTEEQ6S8J3 1075 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 BTNL9Q6UXG8 535 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 PARK7Q99497 189 aaKnown RBP14.08□□□□□ -0.16
IFT20-207ENST00000578547 PAGR1Q9BTK6 254 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 SPZ1Q9BXG8 430 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 SLC26A6Q9BXS9 759 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 ZFYVE28Q9HCC9 887 aa14.08□□□□□ -0.16
IFT20-207ENST00000578547 RBM19Q9Y4C8 960 aaKnown RBP14.08□□□□□ -0.16
IFT20-207ENST00000578547 PTPDC1A2A3K4 754 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 CYTH3O43739 400 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 JAK2O60674 1132 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 PEX10O60683 326 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 PLA2G6O60733 806 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 ZBED4O75132 1171 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 IFNAR1P17181 557 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 BECN1Q14457 450 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 CDC37Q16543 378 aaPredicted RBP14.07□□□□□ -0.16
IFT20-207ENST00000578547 RRP36Q96EU6 259 aaKnown RBP14.07□□□□□ -0.16
IFT20-207ENST00000578547 PIGSQ96S52 555 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 BEGAINQ9BUH8 593 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 JMJD4Q9H9V9 463 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 HOXC10Q9NYD6 342 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 SEC63Q9UGP8 760 aaKnown RBP14.07□□□□□ -0.16
IFT20-207ENST00000578547 MYPNQ86TC9 1320 aa14.07□□□□□ -0.16
IFT20-207ENST00000578547 RLFQ13129 1914 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 VWA5AO00534 786 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 TLR2O60603 784 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 CTDNEP1O95476 244 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 HSP90AA1P07900 732 aaKnown RBP14.06□□□□□ -0.16
IFT20-207ENST00000578547 SLC4A3P48751 1232 aa14.06□□□□□ -0.16
IFT20-207ENST00000578547 AKAP17AQ02040 695 aaKnown RBP14.06□□□□□ -0.16
IFT20-207ENST00000578547 SSRP1Q08945 709 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms