RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 CCDC178Q5BJE1 867 aa25.44■■□□□ 1.66
CDC42EP4-203ENST00000578516 RAVER2Q9HCJ3 691 aaKnown RBP25.44■■□□□ 1.66
CDC42EP4-203ENST00000578516 ZNF214Q9UL59 606 aaPredicted RBP25.44■■□□□ 1.66
CDC42EP4-203ENST00000578516 MCM5P33992 734 aa25.43■■□□□ 1.66
CDC42EP4-203ENST00000578516 SLC4A3P48751 1232 aa25.43■■□□□ 1.66
CDC42EP4-203ENST00000578516 NT5C2P49902 561 aa25.43■■□□□ 1.66
CDC42EP4-203ENST00000578516 TSGA10IPQ3SY00 556 aa25.43■■□□□ 1.66
CDC42EP4-203ENST00000578516 CPXCR1Q8N123 301 aa25.43■■□□□ 1.66
CDC42EP4-203ENST00000578516 SRRDQ9UH36 339 aa25.43■■□□□ 1.66
CDC42EP4-203ENST00000578516 PRR12Q9ULL5 1215 aa25.43■■□□□ 1.66
CDC42EP4-203ENST00000578516 PTPN22Q9Y2R2 807 aa25.43■■□□□ 1.66
CDC42EP4-203ENST00000578516 PLXNA1Q9UIW2 1896 aa25.43■■□□□ 1.66
CDC42EP4-203ENST00000578516 ZKSCAN1P17029 563 aaPredicted RBP25.42■■□□□ 1.66
CDC42EP4-203ENST00000578516 CCDC174Q6PII3 467 aa25.42■■□□□ 1.66
CDC42EP4-203ENST00000578516 STAG2Q8N3U4 1231 aa25.42■■□□□ 1.66
CDC42EP4-203ENST00000578516 PRPF38AQ8NAV1 312 aaKnown RBP25.42■■□□□ 1.66
CDC42EP4-203ENST00000578516 UBA5Q9GZZ9 404 aa25.42■■□□□ 1.66
CDC42EP4-203ENST00000578516 HTTP42858 3142 aa25.42■■□□□ 1.66
CDC42EP4-203ENST00000578516 ZNF236Q9UL36 1845 aa25.42■■□□□ 1.66
CDC42EP4-203ENST00000578516 ERICH2A1L162 156 aa25.41■■□□□ 1.66
CDC42EP4-203ENST00000578516 RXRAP19793 462 aa25.41■■□□□ 1.66
CDC42EP4-203ENST00000578516 SYDE2Q5VT97 1194 aa25.41■■□□□ 1.66
CDC42EP4-203ENST00000578516 GPR142Q7Z601 462 aa25.41■■□□□ 1.66
CDC42EP4-203ENST00000578516 FAM160B2Q86V87 743 aa25.41■■□□□ 1.66
CDC42EP4-203ENST00000578516 RIPK3Q9Y572 518 aa25.41■■□□□ 1.66
CDC42EP4-203ENST00000578516 LCTP09848 1927 aa25.41■■□□□ 1.66
CDC42EP4-203ENST00000578516 ERCC3P19447 782 aa25.4■■□□□ 1.66
CDC42EP4-203ENST00000578516 FLT3LGP49771 235 aa25.4■■□□□ 1.66
CDC42EP4-203ENST00000578516 EXOSC10Q01780 885 aaKnown RBP25.4■■□□□ 1.66
CDC42EP4-203ENST00000578516 SLC35G1Q2M3R5 365 aa25.4■■□□□ 1.66
CDC42EP4-203ENST00000578516 FBXO46Q6PJ61 603 aaPredicted RBP25.4■■□□□ 1.66
CDC42EP4-203ENST00000578516 NCAPG2Q86XI2 1143 aa25.4■■□□□ 1.66
CDC42EP4-203ENST00000578516 MB21D1Q8N884 522 aa25.4■■□□□ 1.66
CDC42EP4-203ENST00000578516 SLC38A10Q9HBR0 1119 aa25.4■■□□□ 1.66
CDC42EP4-203ENST00000578516 ZNF536O15090 1300 aa25.39■■□□□ 1.66
CDC42EP4-203ENST00000578516 SART3Q15020 963 aaKnown RBP25.39■■□□□ 1.66
CDC42EP4-203ENST00000578516 SNRNP48Q6IEG0 339 aaKnown RBP25.39■■□□□ 1.66
CDC42EP4-203ENST00000578516 ZNF654Q8IZM8 581 aa25.39■■□□□ 1.66
CDC42EP4-203ENST00000578516 CHURC1Q8WUH1 139 aa25.39■■□□□ 1.66
CDC42EP4-203ENST00000578516 HPS5Q9UPZ3 1129 aa25.39■■□□□ 1.66
CDC42EP4-203ENST00000578516 KRT32Q14532 448 aa25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 BTNL9Q6UXG8 535 aa25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 DHX32Q7L7V1 743 aaKnown RBP25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 PLEKHH3Q7Z736 793 aa25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 CCAR1Q8IX12 1150 aaKnown RBP25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 SH3TC2Q8TF17 1288 aa25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 NUP133Q8WUM0 1156 aa25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 COA7Q96BR5 231 aa25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 TMEM87BQ96K49 555 aa25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 AGBL1Q96MI9 1066 aa25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 GJD2Q9UKL4 321 aa25.38■■□□□ 1.65
CDC42EP4-203ENST00000578516 RBBP6Q7Z6E9 1792 aaKnown RBP25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 ZBED4O75132 1171 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 PARP1P09874 1014 aaKnown RBP25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 ELNP15502 786 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 CASTP20810 708 aaKnown RBP25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 MAPK4P31152 587 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 STAT3P40763 770 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 CCNA1P78396 465 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 GRM4Q14833 912 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 NFXL1Q6ZNB6 911 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 RIOX2Q8IUF8 465 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 CCDC144CPQ8IYA2 1237 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 ABHD8Q96I13 439 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 CWC22Q9HCG8 908 aaKnown RBP25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 HOMER2Q9NSB8 354 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 MAD2L2Q9UI95 211 aa25.37■■□□□ 1.65
CDC42EP4-203ENST00000578516 PLA2G6O60733 806 aa25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 MYCP01106 439 aaPredicted RBP25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 CYP2B6P20813 491 aa25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 TROAPQ12815 778 aa25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 BLOC1S2Q6QNY1 142 aa25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 NBPF11Q86T75 865 aa25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 UPF3BQ9BZI7 483 aaKnown RBP25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 BRPF3Q9ULD4 1205 aa25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 CTDP1Q9Y5B0 961 aaPredicted RBP25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 MCM3APO60318 1980 aa25.36■■□□□ 1.65
CDC42EP4-203ENST00000578516 ASPRV1Q53RT3 343 aa25.35■■□□□ 1.65
CDC42EP4-203ENST00000578516 MORN1Q5T089 497 aa25.35■■□□□ 1.65
CDC42EP4-203ENST00000578516 RAET1EQ8TD07 263 aa25.35■■□□□ 1.65
CDC42EP4-203ENST00000578516 TEX13BQ9BXU2 312 aa25.35■■□□□ 1.65
CDC42EP4-203ENST00000578516 RANBP17Q9H2T7 1088 aaKnown RBP25.35■■□□□ 1.65
CDC42EP4-203ENST00000578516 EPB41L2O43491 1005 aaKnown RBP25.34■■□□□ 1.65
CDC42EP4-203ENST00000578516 RPS6KB1P23443 525 aa25.34■■□□□ 1.65
CDC42EP4-203ENST00000578516 PTPREP23469 700 aa25.34■■□□□ 1.65
CDC42EP4-203ENST00000578516 ARHGEF6Q15052 776 aa25.34■■□□□ 1.65
CDC42EP4-203ENST00000578516 GPATCH4Q5T3I0 446 aaKnown RBP25.34■■□□□ 1.65
CDC42EP4-203ENST00000578516 Q6ZUG5 572 aa25.34■■□□□ 1.65
CDC42EP4-203ENST00000578516 SHCBP1Q8NEM2 672 aa25.34■■□□□ 1.65
CDC42EP4-203ENST00000578516 VAT1LQ9HCJ6 419 aa25.34■■□□□ 1.65
CDC42EP4-203ENST00000578516 PALM3A6NDB9 673 aaPredicted RBP25.33■■□□□ 1.65
CDC42EP4-203ENST00000578516 CCDC69A6NI79 296 aa25.33■■□□□ 1.65
CDC42EP4-203ENST00000578516 GNRH1P01148 92 aa25.33■■□□□ 1.65
CDC42EP4-203ENST00000578516 HOXD10P28358 340 aa25.33■■□□□ 1.65
CDC42EP4-203ENST00000578516 TRIM32Q13049 653 aa25.33■■□□□ 1.65
CDC42EP4-203ENST00000578516 PKN2Q16513 984 aaKnown RBP25.33■■□□□ 1.65
CDC42EP4-203ENST00000578516 CCL14Q16627 93 aa25.33■■□□□ 1.65
CDC42EP4-203ENST00000578516 CATIPQ7Z7H3 387 aa25.33■■□□□ 1.65
CDC42EP4-203ENST00000578516 MICU3Q86XE3 530 aa25.33■■□□□ 1.65
CDC42EP4-203ENST00000578516 ADGRF4Q8IZF3 695 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms