RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 SPZ1Q9BXG8 430 aa16.14■□□□□ 0.17
LINC01543-201ENST00000578367 RBM27Q9P2N5 1060 aaKnown RBP16.14■□□□□ 0.17
LINC01543-201ENST00000578367 RABGAP1Q9Y3P9 1069 aa16.14■□□□□ 0.17
LINC01543-201ENST00000578367 TLR2O60603 784 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 PFKFB2O60825 505 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 ZBED4O75132 1171 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 COPB2P35606 906 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 IKQ13123 557 aaPredicted RBP16.13■□□□□ 0.17
LINC01543-201ENST00000578367 SYDE2Q5VT97 1194 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 TMTC3Q6ZXV5 915 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 KCTD1Q719H9 257 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 SMCR8Q8TEV9 937 aaPredicted RBP16.13■□□□□ 0.17
LINC01543-201ENST00000578367 SNX21Q969T3 373 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 NUP88Q99567 741 aaPredicted RBP16.13■□□□□ 0.17
LINC01543-201ENST00000578367 P2RX7Q99572 595 aaKnown RBP16.13■□□□□ 0.17
LINC01543-201ENST00000578367 MAF1Q9H063 256 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 SLKQ9H2G2 1235 aaPredicted RBP16.13■□□□□ 0.17
LINC01543-201ENST00000578367 RIOX1Q9H6W3 641 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 HPS5Q9UPZ3 1129 aa16.13■□□□□ 0.17
LINC01543-201ENST00000578367 SPDYE16A6NNV3 312 aaPredicted RBP16.12■□□□□ 0.17
LINC01543-201ENST00000578367 VWA5AO00534 786 aa16.12■□□□□ 0.17
LINC01543-201ENST00000578367 CDKL5O76039 1030 aa16.12■□□□□ 0.17
LINC01543-201ENST00000578367 DGKZQ13574 1117 aa16.12■□□□□ 0.17
LINC01543-201ENST00000578367 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
LINC01543-201ENST00000578367 GPCPD1Q9NPB8 672 aa16.12■□□□□ 0.17
LINC01543-201ENST00000578367 WBP1LQ9NX94 342 aa16.12■□□□□ 0.17
LINC01543-201ENST00000578367 MORF4L1Q9UBU8 362 aa16.12■□□□□ 0.17
LINC01543-201ENST00000578367 TPCN1Q9ULQ1 816 aa16.12■□□□□ 0.17
LINC01543-201ENST00000578367 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
LINC01543-201ENST00000578367 FAM110CQ1W6H9 321 aa16.11■□□□□ 0.17
LINC01543-201ENST00000578367 TEX2Q8IWB9 1127 aa16.11■□□□□ 0.17
LINC01543-201ENST00000578367 STAG2Q8N3U4 1231 aa16.11■□□□□ 0.17
LINC01543-201ENST00000578367 MTMR8Q96EF0 704 aa16.11■□□□□ 0.17
LINC01543-201ENST00000578367 MYL10Q9BUA6 226 aa16.11■□□□□ 0.17
LINC01543-201ENST00000578367 RANBP17Q9H2T7 1088 aaKnown RBP16.11■□□□□ 0.17
LINC01543-201ENST00000578367 RNF186Q9NXI6 227 aa16.11■□□□□ 0.17
LINC01543-201ENST00000578367 PRR12Q9ULL5 1215 aa16.11■□□□□ 0.17
LINC01543-201ENST00000578367 NAP1L2Q9ULW6 460 aaPredicted RBP16.11■□□□□ 0.17
LINC01543-201ENST00000578367 MTMR7Q9Y216 660 aa16.11■□□□□ 0.17
LINC01543-201ENST00000578367 CTDP1Q9Y5B0 961 aaPredicted RBP16.11■□□□□ 0.17
LINC01543-201ENST00000578367 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
LINC01543-201ENST00000578367 ADGRA2Q96PE1 1338 aa16.11■□□□□ 0.17
LINC01543-201ENST00000578367 PTPRFP10586 1907 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 hCG_1984214I3L0E3 225 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 CPLX1O14810 134 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 IFNAR1P17181 557 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 CCNA1P78396 465 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 TKFCQ3LXA3 575 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 C17orf99Q6UX52 265 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 FAM177A1Q8N128 213 aaPredicted RBP16.1■□□□□ 0.17
LINC01543-201ENST00000578367 ZNF713Q8N859 430 aaPredicted RBP16.1■□□□□ 0.17
LINC01543-201ENST00000578367 KIFC2Q96AC6 838 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 ATG4CQ96DT6 458 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 FAM217BQ9NTX9 383 aaPredicted RBP16.1■□□□□ 0.17
LINC01543-201ENST00000578367 FBXO28Q9NVF7 368 aa16.1■□□□□ 0.17
LINC01543-201ENST00000578367 SLC25A27O95847 323 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 GOLGA8HP0CJ92 632 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 CYP2C8P10632 490 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 BCRP11274 1271 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 CRHR2Q13324 411 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 ME3Q16798 604 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 TTBK2Q6IQ55 1244 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 SHCBP1Q8NEM2 672 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 REPS2Q8NFH8 660 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 RRP36Q96EU6 259 aaKnown RBP16.09■□□□□ 0.17
LINC01543-201ENST00000578367 LLPHQ9BRT6 129 aaKnown RBP16.09■□□□□ 0.17
LINC01543-201ENST00000578367 TEX13BQ9BXU2 312 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 RNF26Q9BY78 433 aaPredicted RBP16.09■□□□□ 0.17
LINC01543-201ENST00000578367 RBPJLQ9UBG7 517 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 MYH4Q9Y623 1939 aa16.09■□□□□ 0.17
LINC01543-201ENST00000578367 PNMA6FA0A0J9YX94 578 aa16.08■□□□□ 0.16
LINC01543-201ENST00000578367 ZBTB5O15062 677 aa16.08■□□□□ 0.16
LINC01543-201ENST00000578367 ICAM1P05362 532 aa16.08■□□□□ 0.16
LINC01543-201ENST00000578367 CDC27P30260 824 aa16.08■□□□□ 0.16
LINC01543-201ENST00000578367 ADD1P35611 737 aaKnown RBP16.08■□□□□ 0.16
LINC01543-201ENST00000578367 SLC16A2P36021 539 aa16.08■□□□□ 0.16
LINC01543-201ENST00000578367 FUT2Q10981 343 aa16.08■□□□□ 0.16
LINC01543-201ENST00000578367 NTRK3Q16288 839 aa16.08■□□□□ 0.16
LINC01543-201ENST00000578367 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.16
LINC01543-201ENST00000578367 UBA5Q9GZZ9 404 aa16.08■□□□□ 0.16
LINC01543-201ENST00000578367 JMJD4Q9H9V9 463 aa16.08■□□□□ 0.16
LINC01543-201ENST00000578367 SEC63Q9UGP8 760 aaKnown RBP16.08■□□□□ 0.16
LINC01543-201ENST00000578367 PRPF3O43395 683 aaKnown RBP16.07■□□□□ 0.16
LINC01543-201ENST00000578367 CYTH3O43739 400 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 TRPA1O75762 1119 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 RXRAP19793 462 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 STAT3P40763 770 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 ERVK-9P63128 1117 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 ERVK-24P63145 666 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 CCT2P78371 535 aaKnown RBP16.07■□□□□ 0.16
LINC01543-201ENST00000578367 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
LINC01543-201ENST00000578367 SCRN1Q12765 414 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 ARHGEF6Q15052 776 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC01543-201ENST00000578367 RASGRP2Q7LDG7 609 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 RIOX2Q8IUF8 465 aa16.07■□□□□ 0.16
LINC01543-201ENST00000578367 CCDC144CPQ8IYA2 1237 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms