RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 COL11A2P13942 1736 aaPredicted RBP12.95□□□□□ -0.34
GGA3-205ENST00000578348 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 RGPD3A6NKT7 1758 aaPredicted RBP12.95□□□□□ -0.34
GGA3-205ENST00000578348 RGPD4Q7Z3J3 1758 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 hCG_1642624A0A1W2PR95 340 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 APBA3O96018 575 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 SRGNP10124 158 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 CASP1P29466 404 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 STX17P56962 302 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 MAP3K9P80192 1104 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 PPP2R3AQ06190 1150 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 NR1I3Q14994 352 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 TEX35Q5T0J7 233 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 MAPKAPK5Q8IW41 473 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 SRBD1Q8N5C6 995 aaKnown RBP12.95□□□□□ -0.34
GGA3-205ENST00000578348 SHISA4Q96DD7 197 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 DYNLL2Q96FJ2 89 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 EPSTI1Q96J88 318 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 MRFAP1Q9Y605 127 aa12.95□□□□□ -0.34
GGA3-205ENST00000578348 A0A087X0B3 334 aa12.94□□□□□ -0.34
GGA3-205ENST00000578348 SOWAHDA6NJG2 315 aa12.94□□□□□ -0.34
GGA3-205ENST00000578348 TEX33O43247 280 aa12.94□□□□□ -0.34
GGA3-205ENST00000578348 TPM1P09493 284 aa12.94□□□□□ -0.34
GGA3-205ENST00000578348 ZNF444Q8N0Y2 327 aaPredicted RBP12.94□□□□□ -0.34
GGA3-205ENST00000578348 SPATA20Q8TB22 786 aa12.94□□□□□ -0.34
GGA3-205ENST00000578348 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
GGA3-205ENST00000578348 A0A1B0GTH6 734 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 TRIM75PA6NK02 468 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 AKR1B15C9JRZ8 316 aaPredicted RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 ERCC5P28715 1186 aaPredicted RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 ALDH1B1P30837 517 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 PDE6BP35913 854 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 SLC4A8Q2Y0W8 1093 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 CCDC12Q8WUD4 166 aaPredicted RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 CPLX3Q8WVH0 158 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 MRPL44Q9H9J2 332 aaKnown RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 IL17RBQ9NRM6 502 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 SAP30BPQ9UHR5 308 aaKnown RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 TNS1Q9HBL0 1735 aaKnown RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 SYNRGQ9UMZ2 1314 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 BMP15O95972 392 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 SCG2P13521 617 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 CD44P16070 742 aaKnown RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 GNAQP50148 359 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 RHBDL3P58872 404 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 GRM4Q14833 912 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 SMYD4Q8IYR2 804 aaPredicted RBP12.93□□□□□ -0.34
GGA3-205ENST00000578348 PNMA1Q8ND90 353 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 CCDC34Q96HJ3 373 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 LZTFL1Q9NQ48 299 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 SNED1Q8TER0 1413 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 FLT1P17948 1338 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 MYH1P12882 1939 aa12.93□□□□□ -0.34
GGA3-205ENST00000578348 CCDC175P0C221 793 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 RASA1P20936 1047 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 PFKFB3Q16875 520 aaPredicted RBP12.92□□□□□ -0.34
GGA3-205ENST00000578348 IGSF22Q8N9C0 903 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 SYMPKQ92797 1274 aaKnown RBP12.92□□□□□ -0.34
GGA3-205ENST00000578348 TMEM51Q9NW97 253 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 POLR3GO15318 223 aaPredicted RBP12.92□□□□□ -0.34
GGA3-205ENST00000578348 GTF2IP78347 998 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 RBL2Q08999 1139 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 SPATA1Q5VX52 437 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 PPFIBP1Q86W92 1011 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 GPR161Q8N6U8 529 aaKnown RBP12.92□□□□□ -0.34
GGA3-205ENST00000578348 TNFRSF25Q93038 417 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 PAGE5Q96GU1 130 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
GGA3-205ENST00000578348 CCDC66A2RUB6 948 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 WNT7AO00755 349 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 MMP10P09238 476 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 NPY5RQ15761 445 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 CC2D1AQ6P1N0 951 aaPredicted RBP12.91□□□□□ -0.34
GGA3-205ENST00000578348 APTXQ7Z2E3 356 aaKnown RBP12.91□□□□□ -0.34
GGA3-205ENST00000578348 SLC44A5Q8NCS7 719 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 PANX2Q96RD6 677 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 ZC3H12CQ9C0D7 883 aaKnown RBP12.91□□□□□ -0.34
GGA3-205ENST00000578348 TMX4Q9H1E5 349 aaPredicted RBP12.91□□□□□ -0.34
GGA3-205ENST00000578348 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 DAGLAQ9Y4D2 1042 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 A0A0U1RQJ8 604 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 USP17L3A6NCW0 530 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 USP17L4A6NCW7 530 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 SASH3O75995 380 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 TBC1D8O95759 1140 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 CDK8P49336 464 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 CUL4BQ13620 913 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 DPP8Q6V1X1 898 aaPredicted RBP12.91□□□□□ -0.34
GGA3-205ENST00000578348 RAD9BQ6WBX8 426 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 RSRC2Q7L4I2 434 aaKnown RBP12.91□□□□□ -0.34
GGA3-205ENST00000578348 USP17L1Q7RTZ2 530 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 ATRIPQ8WXE1 791 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 STAMQ92783 540 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms