RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 HDAC1Q13547 482 aaPredicted RBP19.8■□□□□ 0.76
CDK5RAP3-206ENST00000578018 ANKRD45Q5TZF3 282 aa19.8■□□□□ 0.76
CDK5RAP3-206ENST00000578018 CCDC129Q6ZRS4 1044 aa19.8■□□□□ 0.76
CDK5RAP3-206ENST00000578018 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
CDK5RAP3-206ENST00000578018 RIPK3Q9Y572 518 aa19.8■□□□□ 0.76
CDK5RAP3-206ENST00000578018 MCM3APO60318 1980 aa19.79■□□□□ 0.76
CDK5RAP3-206ENST00000578018 SLC3A2P08195 630 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP3-206ENST00000578018 LRRC41Q15345 812 aa19.79■□□□□ 0.76
CDK5RAP3-206ENST00000578018 LRIT3Q3SXY7 679 aa19.79■□□□□ 0.76
CDK5RAP3-206ENST00000578018 KIFC2Q96AC6 838 aa19.79■□□□□ 0.76
CDK5RAP3-206ENST00000578018 SLC38A10Q9HBR0 1119 aa19.79■□□□□ 0.76
CDK5RAP3-206ENST00000578018 ZBTB47Q9UFB7 747 aaPredicted RBP19.79■□□□□ 0.76
CDK5RAP3-206ENST00000578018 FEM1BQ9UK73 627 aa19.79■□□□□ 0.76
CDK5RAP3-206ENST00000578018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.79■□□□□ 0.76
CDK5RAP3-206ENST00000578018 TAL1P17542 331 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-206ENST00000578018 MDM2Q00987 491 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-206ENST00000578018 TFAP4Q01664 338 aa19.78■□□□□ 0.76
CDK5RAP3-206ENST00000578018 SNX17Q15036 470 aa19.78■□□□□ 0.76
CDK5RAP3-206ENST00000578018 EVI5LQ96CN4 794 aa19.78■□□□□ 0.76
CDK5RAP3-206ENST00000578018 DNAJC25-GNG10A0A024R161 153 aa19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 ZBED4O75132 1171 aa19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 MYCNP04198 464 aaPredicted RBP19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 ZNF865P0CJ78 1059 aaPredicted RBP19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 RARBP10826 455 aa19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 PDE1AP54750 535 aa19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 SLFN13Q68D06 897 aa19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 SLC39A5Q6ZMH5 540 aa19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 CPXCR1Q8N123 301 aa19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 RAVER2Q9HCJ3 691 aaKnown RBP19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 XPNPEP3Q9NQH7 507 aa19.77■□□□□ 0.76
CDK5RAP3-206ENST00000578018 BMP3P12645 472 aa19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ADCYAP1R1P41586 468 aa19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 OAZ1P54368 228 aa19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 VPS53Q5VIR6 699 aa19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 GPR153Q6NV75 609 aa19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 MSL3Q8N5Y2 521 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 CNPY2Q9Y2B0 182 aa19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ATP11BQ9Y2G3 1177 aa19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 CTDP1Q9Y5B0 961 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 SYNGAP1Q96PV0 1343 aa19.76■□□□□ 0.75
CDK5RAP3-206ENST00000578018 COL6A3P12111 3177 aa19.75■□□□□ 0.75
CDK5RAP3-206ENST00000578018 AKR1A1P14550 325 aa19.75■□□□□ 0.75
CDK5RAP3-206ENST00000578018 CTDSPL2Q05D32 466 aa19.75■□□□□ 0.75
CDK5RAP3-206ENST00000578018 TRIM60Q495X7 471 aa19.75■□□□□ 0.75
CDK5RAP3-206ENST00000578018 LENG1Q96BZ8 264 aaPredicted RBP19.75■□□□□ 0.75
CDK5RAP3-206ENST00000578018 DDX11Q96FC9 970 aa19.75■□□□□ 0.75
CDK5RAP3-206ENST00000578018 GMCL1Q96IK5 515 aa19.75■□□□□ 0.75
CDK5RAP3-206ENST00000578018 PHF24Q9UPV7 400 aa19.75■□□□□ 0.75
CDK5RAP3-206ENST00000578018 LAMA2P24043 3122 aaKnown RBP19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 PGK1P00558 417 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 SLC4A3P48751 1232 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 STAT2P52630 851 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 PPP4R3BQ5MIZ7 849 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 C1orf53Q5VUE5 145 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 MAMDC4Q6UXC1 1216 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ZNF467Q7Z7K2 595 aaPredicted RBP19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 FERMT2Q96AC1 680 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 FGD4Q96M96 766 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 LBHD1Q9BQE6 289 aaPredicted RBP19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 INCENPQ9NQS7 918 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 HELLSQ9NRZ9 838 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 PRKAG2Q9UGJ0 569 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 FBXO40Q9UH90 709 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ANAPC4Q9UJX5 808 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 TACC3Q9Y6A5 838 aa19.74■□□□□ 0.75
CDK5RAP3-206ENST00000578018 A0A0D9SFI3 127 aa19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 TSPY2A6NKD2 308 aa19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 TMEM232C9JQI7 657 aa19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 NMT2O60551 498 aa19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 SNAI1O95863 264 aaPredicted RBP19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 SLC1A4P43007 532 aa19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 RNF180Q86T96 592 aa19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 CHST13Q8NET6 341 aa19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 IL17RBQ9NRM6 502 aa19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ISY1Q9ULR0 285 aaKnown RBP19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 STX8Q9UNK0 236 aa19.73■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ORC4O43929 436 aa19.72■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ADAMTS4O75173 837 aa19.72■□□□□ 0.75
CDK5RAP3-206ENST00000578018 FDX1P10109 184 aa19.72■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ALX1Q15699 326 aa19.72■□□□□ 0.75
CDK5RAP3-206ENST00000578018 FAM160B2Q86V87 743 aa19.72■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ANKRD35Q8N283 1001 aa19.72■□□□□ 0.75
CDK5RAP3-206ENST00000578018 FAM227BQ96M60 508 aa19.72■□□□□ 0.75
CDK5RAP3-206ENST00000578018 PDLIM7Q9NR12 457 aa19.72■□□□□ 0.75
CDK5RAP3-206ENST00000578018 LRRC37A2A6NM11 1700 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 FGRP09769 529 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 MCCP23508 829 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 NOVP48745 357 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 AAMPQ13685 434 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 RASGRP2Q7LDG7 609 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 TICAM2Q86XR7 235 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 CHURC1Q8WUH1 139 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 STAG1Q8WVM7 1258 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 LNPKQ9C0E8 428 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 PRDM5Q9NQX1 630 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 HOMER2Q9NSB8 354 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ZHX1Q9UKY1 873 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 ZNF536O15090 1300 aa19.71■□□□□ 0.75
CDK5RAP3-206ENST00000578018 SYNRGQ9UMZ2 1314 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms