RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 BAZ2AQ9UIF9 1905 aaKnown RBP19.06■□□□□ 0.64
VAPA-204ENST00000577901 VWA5AO00534 786 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 RAD21O60216 631 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 RARBP10826 455 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 KCTD2Q14681 263 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 SHHQ15465 462 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 SBK1Q52WX2 424 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 BADQ92934 168 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 XPNPEP3Q9NQH7 507 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 PDLIM7Q9NR12 457 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 PPP1R9AQ9ULJ8 1098 aa19.05■□□□□ 0.64
VAPA-204ENST00000577901 PARP14Q460N5 1801 aa19.04■□□□□ 0.64
VAPA-204ENST00000577901 STAT3P40763 770 aa19.04■□□□□ 0.64
VAPA-204ENST00000577901 TDO2P48775 406 aa19.04■□□□□ 0.64
VAPA-204ENST00000577901 ZNF792Q3KQV3 632 aa19.04■□□□□ 0.64
VAPA-204ENST00000577901 C9orf50Q5SZB4 431 aa19.04■□□□□ 0.64
VAPA-204ENST00000577901 FAM83BQ5T0W9 1011 aa19.04■□□□□ 0.64
VAPA-204ENST00000577901 C1orf53Q5VUE5 145 aa19.04■□□□□ 0.64
VAPA-204ENST00000577901 TINF2Q9BSI4 451 aa19.04■□□□□ 0.64
VAPA-204ENST00000577901 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.04■□□□□ 0.64
VAPA-204ENST00000577901 ZNF214Q9UL59 606 aaPredicted RBP19.04■□□□□ 0.64
VAPA-204ENST00000577901 PHF24Q9UPV7 400 aa19.04■□□□□ 0.64
VAPA-204ENST00000577901 DIS3Q9Y2L1 958 aaKnown RBP19.04■□□□□ 0.64
VAPA-204ENST00000577901 MINDY4BA8MYZ0 360 aa19.03■□□□□ 0.64
VAPA-204ENST00000577901 COPB2P35606 906 aa19.03■□□□□ 0.64
VAPA-204ENST00000577901 MCMDC2Q4G0Z9 681 aa19.03■□□□□ 0.64
VAPA-204ENST00000577901 ZNF697Q5TEC3 545 aa19.03■□□□□ 0.64
VAPA-204ENST00000577901 SH3RF1Q7Z6J0 888 aa19.03■□□□□ 0.64
VAPA-204ENST00000577901 RNF180Q86T96 592 aa19.03■□□□□ 0.64
VAPA-204ENST00000577901 IFNL3Q8IZI9 196 aa19.03■□□□□ 0.64
VAPA-204ENST00000577901 EYSQ5T1H1 3165 aa19.03■□□□□ 0.64
VAPA-204ENST00000577901 TRIM43BA6NCK2 446 aa19.02■□□□□ 0.64
VAPA-204ENST00000577901 PGK1P00558 417 aa19.02■□□□□ 0.64
VAPA-204ENST00000577901 NEFLP07196 543 aa19.02■□□□□ 0.64
VAPA-204ENST00000577901 TAL1P17542 331 aaPredicted RBP19.02■□□□□ 0.64
VAPA-204ENST00000577901 SDSP20132 328 aa19.02■□□□□ 0.64
VAPA-204ENST00000577901 PDE4AP27815 886 aa19.02■□□□□ 0.64
VAPA-204ENST00000577901 TLE2Q04725 743 aa19.02■□□□□ 0.64
VAPA-204ENST00000577901 REPS2Q8NFH8 660 aa19.02■□□□□ 0.64
VAPA-204ENST00000577901 TRIM43Q96BQ3 446 aaPredicted RBP19.02■□□□□ 0.64
VAPA-204ENST00000577901 NAPBQ9H115 298 aa19.02■□□□□ 0.64
VAPA-204ENST00000577901 COL11A1P12107 1806 aaPredicted RBP19.02■□□□□ 0.63
VAPA-204ENST00000577901 HIP1O00291 1037 aa19.01■□□□□ 0.63
VAPA-204ENST00000577901 CENPBP07199 599 aaPredicted RBP19.01■□□□□ 0.63
VAPA-204ENST00000577901 NUP88Q99567 741 aaPredicted RBP19.01■□□□□ 0.63
VAPA-204ENST00000577901 ZNF287Q9HBT7 754 aa19.01■□□□□ 0.63
VAPA-204ENST00000577901 ZNF865P0CJ78 1059 aaPredicted RBP19■□□□□ 0.63
VAPA-204ENST00000577901 AKR1A1P14550 325 aa19■□□□□ 0.63
VAPA-204ENST00000577901 RASA1P20936 1047 aa19■□□□□ 0.63
VAPA-204ENST00000577901 CCDC129Q6ZRS4 1044 aa19■□□□□ 0.63
VAPA-204ENST00000577901 CENPQQ7L2Z9 268 aaPredicted RBP19■□□□□ 0.63
VAPA-204ENST00000577901 PHF6Q8IWS0 365 aaKnown RBP eCLIP19■□□□□ 0.634e-6■□□□□ 8.1
VAPA-204ENST00000577901 STK11IPQ8N1F8 1099 aa19■□□□□ 0.63
VAPA-204ENST00000577901 FAM227BQ96M60 508 aa19■□□□□ 0.63
VAPA-204ENST00000577901 SLF1Q9BQI6 1058 aa19■□□□□ 0.63
VAPA-204ENST00000577901 TEX13BQ9BXU2 312 aa19■□□□□ 0.63
VAPA-204ENST00000577901 MKNK2Q9HBH9 465 aa19■□□□□ 0.63
VAPA-204ENST00000577901 EPB41L4AQ9HCS5 686 aaPredicted RBP19■□□□□ 0.63
VAPA-204ENST00000577901 CNPY2Q9Y2B0 182 aa19■□□□□ 0.63
VAPA-204ENST00000577901 TACC3Q9Y6A5 838 aa19■□□□□ 0.63
VAPA-204ENST00000577901 ROBO3Q96MS0 1386 aa19■□□□□ 0.63
VAPA-204ENST00000577901 A0A1W2PQ45 241 aaPredicted RBP18.99■□□□□ 0.63
VAPA-204ENST00000577901 A0A1W2PQY0 241 aa18.99■□□□□ 0.63
VAPA-204ENST00000577901 SLC3A2P08195 630 aaKnown RBP18.99■□□□□ 0.63
VAPA-204ENST00000577901 MFAP1P55081 439 aaKnown RBP18.99■□□□□ 0.63
VAPA-204ENST00000577901 NMIQ13287 307 aaPredicted RBP18.99■□□□□ 0.63
VAPA-204ENST00000577901 TTC22Q5TAA0 569 aa18.99■□□□□ 0.63
VAPA-204ENST00000577901 SNRNP48Q6IEG0 339 aaKnown RBP18.99■□□□□ 0.63
VAPA-204ENST00000577901 LENG1Q96BZ8 264 aaPredicted RBP18.99■□□□□ 0.63
VAPA-204ENST00000577901 DIAPH3Q9NSV4 1193 aa18.99■□□□□ 0.63
VAPA-204ENST00000577901 NYAP2Q9P242 653 aa18.99■□□□□ 0.63
VAPA-204ENST00000577901 ZNFX1Q9P2E3 1918 aaKnown RBP18.99■□□□□ 0.63
VAPA-204ENST00000577901 A0A0D9SFI3 127 aa18.98■□□□□ 0.63
VAPA-204ENST00000577901 F5H6K3 240 aa18.98■□□□□ 0.63
VAPA-204ENST00000577901 NDUFB10O96000 172 aa18.98■□□□□ 0.63
VAPA-204ENST00000577901 CLTBP09497 229 aa18.98■□□□□ 0.63
VAPA-204ENST00000577901 ITGB8P26012 769 aa18.98■□□□□ 0.63
VAPA-204ENST00000577901 SMAD3P84022 425 aaKnown RBP18.98■□□□□ 0.63
VAPA-204ENST00000577901 KLRC3Q07444 240 aa18.98■□□□□ 0.63
VAPA-204ENST00000577901 POTEHQ6S545 545 aa18.98■□□□□ 0.63
VAPA-204ENST00000577901 MSL3Q8N5Y2 521 aaKnown RBP18.98■□□□□ 0.63
VAPA-204ENST00000577901 CDX2Q99626 313 aaPredicted RBP18.98■□□□□ 0.63
VAPA-204ENST00000577901 SEMA6BQ9H3T3 888 aa18.98■□□□□ 0.63
VAPA-204ENST00000577901 CDH23Q9H251 3354 aa18.98■□□□□ 0.63
VAPA-204ENST00000577901 KIAA0355O15063 1070 aa18.97■□□□□ 0.63
VAPA-204ENST00000577901 PQBP1O60828 265 aaKnown RBP18.97■□□□□ 0.63
VAPA-204ENST00000577901 ADAMTS4O75173 837 aa18.97■□□□□ 0.63
VAPA-204ENST00000577901 ZNF444Q8N0Y2 327 aaPredicted RBP18.97■□□□□ 0.63
VAPA-204ENST00000577901 PRPF38AQ8NAV1 312 aaKnown RBP18.97■□□□□ 0.63
VAPA-204ENST00000577901 DDX11Q96FC9 970 aa18.97■□□□□ 0.63
VAPA-204ENST00000577901 COL25A1Q9BXS0 654 aaPredicted RBP18.97■□□□□ 0.63
VAPA-204ENST00000577901 CLIP2Q9UDT6 1046 aa18.97■□□□□ 0.63
VAPA-204ENST00000577901 RIPK3Q9Y572 518 aa18.97■□□□□ 0.63
VAPA-204ENST00000577901 SYNGAP1Q96PV0 1343 aa18.97■□□□□ 0.63
VAPA-204ENST00000577901 PLXNA1Q9UIW2 1896 aa18.97■□□□□ 0.63
VAPA-204ENST00000577901 GREB1LQ9C091 1923 aaPredicted RBP18.96■□□□□ 0.63
VAPA-204ENST00000577901 RAG1P15918 1043 aa18.96■□□□□ 0.63
VAPA-204ENST00000577901 SLC4A3P48751 1232 aa18.96■□□□□ 0.63
VAPA-204ENST00000577901 ACLYP53396 1101 aa18.96■□□□□ 0.63
VAPA-204ENST00000577901 PDE4BQ07343 736 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms