RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 KIAA0355O15063 1070 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 NFKBIBQ15653 356 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 CATSPERGQ6ZRH7 1159 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 FOXP4Q8IVH2 680 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-217ENST00000577897 SPATA5Q8NB90 893 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 C12orf42Q96LP6 360 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 GBP4Q96PP9 640 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 PBX4Q9BYU1 374 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 LRP2BPQ9P2M1 347 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
SREBF1-217ENST00000577897 CTNNA3Q9UI47 895 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 SNX14Q9Y5W7 946 aa16.49■□□□□ 0.23
SREBF1-217ENST00000577897 A0A0D9SFI3 127 aa16.48■□□□□ 0.23
SREBF1-217ENST00000577897 SPDYE16A6NNV3 312 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-217ENST00000577897 GRXCR1A8MXD5 290 aa16.48■□□□□ 0.23
SREBF1-217ENST00000577897 VCAM1P19320 739 aa16.48■□□□□ 0.23
SREBF1-217ENST00000577897 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
SREBF1-217ENST00000577897 CHMP4CQ96CF2 233 aa16.48■□□□□ 0.23
SREBF1-217ENST00000577897 INTS4Q96HW7 963 aaKnown RBP16.48■□□□□ 0.23
SREBF1-217ENST00000577897 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-217ENST00000577897 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.48■□□□□ 0.237e-14■■■□□ 16.2
SREBF1-217ENST00000577897 LRFN3Q9BTN0 628 aa16.48■□□□□ 0.23
SREBF1-217ENST00000577897 DSCC1Q9BVC3 393 aa16.48■□□□□ 0.23
SREBF1-217ENST00000577897 PHF24Q9UPV7 400 aa16.48■□□□□ 0.23
SREBF1-217ENST00000577897 CHD7Q9P2D1 2997 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 BAG3O95817 575 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 IGHA2P01877 340 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 HMGB1P09429 215 aaKnown RBP16.47■□□□□ 0.23
SREBF1-217ENST00000577897 PDIA4P13667 645 aaKnown RBP16.47■□□□□ 0.23
SREBF1-217ENST00000577897 ARID4AP29374 1257 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-217ENST00000577897 ADGRE1Q14246 886 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 TSGA10IPQ3SY00 556 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 ZMYM1Q5SVZ6 1142 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 VPS53Q5VIR6 699 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 RPAP3Q9H6T3 665 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-217ENST00000577897 XPNPEP3Q9NQH7 507 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 PLXNA1Q9UIW2 1896 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 ZNF236Q9UL36 1845 aa16.47■□□□□ 0.23
SREBF1-217ENST00000577897 A0A1W2PQ45 241 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-217ENST00000577897 A0A1W2PQY0 241 aa16.46■□□□□ 0.23
SREBF1-217ENST00000577897 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
SREBF1-217ENST00000577897 COBLO75128 1261 aa16.46■□□□□ 0.23
SREBF1-217ENST00000577897 USP14P54578 494 aa16.46■□□□□ 0.23
SREBF1-217ENST00000577897 LBX2Q6XYB7 198 aa16.46■□□□□ 0.23
SREBF1-217ENST00000577897 ALYREFQ86V81 257 aaKnown RBP16.46■□□□□ 0.23
SREBF1-217ENST00000577897 METTL16Q86W50 562 aaKnown RBP16.46■□□□□ 0.23
SREBF1-217ENST00000577897 MICALL1Q8N3F8 863 aa16.46■□□□□ 0.23
SREBF1-217ENST00000577897 SLC44A5Q8NCS7 719 aa16.46■□□□□ 0.23
SREBF1-217ENST00000577897 JAKMIP1Q96N16 626 aaKnown RBP16.46■□□□□ 0.23
SREBF1-217ENST00000577897 MOV10L1Q9BXT6 1211 aaKnown RBP16.46■□□□□ 0.23
SREBF1-217ENST00000577897 SH2B1Q9NRF2 756 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-217ENST00000577897 PGK1P00558 417 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 RARBP10826 455 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 PLCG2P16885 1265 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 CASTP20810 708 aaKnown RBP16.45■□□□□ 0.22
SREBF1-217ENST00000577897 PTH1RQ03431 593 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 NAA16Q6N069 864 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-217ENST00000577897 BLOC1S2Q6QNY1 142 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 RNF180Q86T96 592 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 ACER1Q8TDN7 264 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 APPBP2Q92624 585 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-217ENST00000577897 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 SLC5A4Q9NY91 659 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 LIMCH1Q9UPQ0 1083 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-217ENST00000577897 CDK5RAP2Q96SN8 1893 aa16.45■□□□□ 0.22
SREBF1-217ENST00000577897 DDX11L8A8MPP1 907 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 DCDC2CA8MYV0 355 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 SLC27A2O14975 620 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 STRNO43815 780 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 ERCC3P19447 782 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 FAAP100Q0VG06 881 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 RUFY3Q7L099 469 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 KIAA1683Q9H0B3 1180 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 IL25Q9H293 177 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 ZSWIM6Q9HCJ5 1215 aa16.44■□□□□ 0.22
SREBF1-217ENST00000577897 FOCADQ5VW36 1801 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 IGSF3O75054 1194 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 CD2BP2O95400 341 aaKnown RBP16.43■□□□□ 0.22
SREBF1-217ENST00000577897 MCAMP43121 646 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 ZAP70P43403 619 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 TFF2Q03403 129 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 PLS1Q14651 629 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 UBE3CQ15386 1083 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 TMEM31Q5JXX7 168 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-217ENST00000577897 NCAPG2Q86XI2 1143 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 TMX3Q96JJ7 454 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
SREBF1-217ENST00000577897 ALDH8A1Q9H2A2 487 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-217ENST00000577897 TIMP1P01033 207 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 PPIGQ13427 754 aaKnown RBP eCLIP16.42■□□□□ 0.224e-8■■□□□ 12.7
SREBF1-217ENST00000577897 CUL4AQ13619 759 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 SKIV2LQ15477 1246 aaKnown RBP16.42■□□□□ 0.22
SREBF1-217ENST00000577897 TMEM240Q5SV17 173 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms