RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 KIFC2Q96AC6 838 aa16.13■□□□□ 0.17
CUEDC1-204ENST00000577497 ANAPC4Q9UJX5 808 aa16.13■□□□□ 0.17
CUEDC1-204ENST00000577497 SZT2Q5T011 3432 aa16.13■□□□□ 0.17
CUEDC1-204ENST00000577497 TSPY2A6NKD2 308 aa16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 FGAP02671 866 aa16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 HSPD1P10809 573 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 IRX6P78412 446 aaPredicted RBP16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 SLFN13Q68D06 897 aa16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 PRPF38AQ8NAV1 312 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 TEX13BQ9BXU2 312 aa16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 OSBPL3Q9H4L5 887 aa16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 RAVER2Q9HCJ3 691 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 ZMYND8Q9ULU4 1186 aaPredicted RBP16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 SYNPO2Q9UMS6 1093 aa16.12■□□□□ 0.17
CUEDC1-204ENST00000577497 LAMA3Q16787 3333 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 BMP3P12645 472 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 SDSP20132 328 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 SLC4A3P48751 1232 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 HAND2P61296 217 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 KCTD2Q14681 263 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 ALX1Q15699 326 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 LRRC26Q2I0M4 334 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 ZNF792Q3KQV3 632 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 CPXCR1Q8N123 301 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 SLC38A10Q9HBR0 1119 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 STX8Q9UNK0 236 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 PLXNA1Q9UIW2 1896 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 ZNFX1Q9P2E3 1918 aaKnown RBP16.11■□□□□ 0.17
CUEDC1-204ENST00000577497 ORC4O43929 436 aa16.1■□□□□ 0.17
CUEDC1-204ENST00000577497 RANBP6O60518 1105 aaKnown RBP16.1■□□□□ 0.17
CUEDC1-204ENST00000577497 FGRP09769 529 aa16.1■□□□□ 0.17
CUEDC1-204ENST00000577497 TAL1P17542 331 aaPredicted RBP16.1■□□□□ 0.17
CUEDC1-204ENST00000577497 SYN1P17600 705 aa16.1■□□□□ 0.17
CUEDC1-204ENST00000577497 MCCP23508 829 aa16.1■□□□□ 0.17
CUEDC1-204ENST00000577497 SLC5A4Q9NY91 659 aa16.1■□□□□ 0.17
CUEDC1-204ENST00000577497 FEM1BQ9UK73 627 aa16.1■□□□□ 0.17
CUEDC1-204ENST00000577497 TRIOBPQ9H2D6 2365 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 TMEM232C9JQI7 657 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 ATP2A1O14983 1001 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 SEPT4O43236 478 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 MSCO60682 206 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 ZBED4O75132 1171 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 PDE4AP27815 886 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 NOVP48745 357 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 GJC2Q5T442 439 aaPredicted RBP16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 KCTD1Q719H9 257 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 TBC1D10CQ8IV04 446 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 GMCL1Q96IK5 515 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 ISY1Q9ULR0 285 aaKnown RBP16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 MTMR7Q9Y216 660 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 ZMYM6O95789 1325 aa16.09■□□□□ 0.17
CUEDC1-204ENST00000577497 COPB2P35606 906 aa16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 SLC1A4P43007 532 aa16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 SNAP25P60880 206 aa16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 CWC27Q6UX04 472 aaKnown RBP16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 TICAM2Q86XR7 235 aa16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 TINF2Q9BSI4 451 aa16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 SENP6Q9GZR1 1112 aaPredicted RBP16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 ZNF536O15090 1300 aa16.08■□□□□ 0.16
CUEDC1-204ENST00000577497 DNAJC25-GNG10A0A024R161 153 aa16.07■□□□□ 0.16
CUEDC1-204ENST00000577497 DNM1LO00429 736 aa16.07■□□□□ 0.16
CUEDC1-204ENST00000577497 STAT2P52630 851 aa16.07■□□□□ 0.16
CUEDC1-204ENST00000577497 FGD4Q96M96 766 aa16.07■□□□□ 0.16
CUEDC1-204ENST00000577497 IL25Q9H293 177 aa16.07■□□□□ 0.16
CUEDC1-204ENST00000577497 HOMER2Q9NSB8 354 aa16.07■□□□□ 0.16
CUEDC1-204ENST00000577497 DIS3Q9Y2L1 958 aaKnown RBP16.07■□□□□ 0.16
CUEDC1-204ENST00000577497 NEDD4P46934 1319 aa16.06■□□□□ 0.16
CUEDC1-204ENST00000577497 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
CUEDC1-204ENST00000577497 ZNF865P0CJ78 1059 aaPredicted RBP16.06■□□□□ 0.16
CUEDC1-204ENST00000577497 ATN1P54259 1190 aaPredicted RBP16.06■□□□□ 0.16
CUEDC1-204ENST00000577497 STAG1Q8WVM7 1258 aa16.06■□□□□ 0.16
CUEDC1-204ENST00000577497 AGBL1Q96MI9 1066 aa16.06■□□□□ 0.16
CUEDC1-204ENST00000577497 GDF15Q99988 308 aa16.06■□□□□ 0.16
CUEDC1-204ENST00000577497 CTDP1Q9Y5B0 961 aaPredicted RBP16.06■□□□□ 0.16
CUEDC1-204ENST00000577497 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 GSPT1P15170 499 aaKnown RBP16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 MAGEA10P43363 369 aaPredicted RBP16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 OAZ1P54368 228 aa16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 IKQ13123 557 aaPredicted RBP16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 RCSD1Q6JBY9 416 aa16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 DDX11Q96FC9 970 aa16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 TMEM47Q9BQJ4 181 aa16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 DIAPH3Q9NSV4 1193 aa16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 PRR12Q9ULL5 1215 aa16.05■□□□□ 0.16
CUEDC1-204ENST00000577497 FRMPD2Q68DX3 1309 aaPredicted RBP16.04■□□□□ 0.16
CUEDC1-204ENST00000577497 SNAI1O95863 264 aaPredicted RBP16.04■□□□□ 0.16
CUEDC1-204ENST00000577497 LRRC41Q15345 812 aa16.04■□□□□ 0.16
CUEDC1-204ENST00000577497 CCDC96Q2M329 555 aa16.04■□□□□ 0.16
CUEDC1-204ENST00000577497 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
CUEDC1-204ENST00000577497 AKNAD1Q5T1N1 836 aa16.04■□□□□ 0.16
CUEDC1-204ENST00000577497 CCDC174Q6PII3 467 aa16.04■□□□□ 0.16
CUEDC1-204ENST00000577497 FAM160B2Q86V87 743 aa16.04■□□□□ 0.16
CUEDC1-204ENST00000577497 ANKRD35Q8N283 1001 aa16.04■□□□□ 0.16
CUEDC1-204ENST00000577497 CHURC1Q8WUH1 139 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms