RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 IFNL3Q8IZI9 196 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 FERMT2Q96AC1 680 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 TRIM43Q96BQ3 446 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 CEP95Q96GE4 821 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 FGD4Q96M96 766 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 TEX13BQ9BXU2 312 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 MKNK2Q9HBH9 465 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 MTMR4Q9NYA4 1195 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 CLIP2Q9UDT6 1046 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 PHF24Q9UPV7 400 aa16.22■□□□□ 0.19
CUEDC1-203ENST00000577422 TTC41PQ6P2S7 1318 aa16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 SNAI1O95863 264 aaPredicted RBP16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 GNAT2P19087 354 aa16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 SNRNP48Q6IEG0 339 aaKnown RBP16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 MAMDC4Q6UXC1 1216 aa16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 PRPF38AQ8NAV1 312 aaKnown RBP16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 SLC17A8Q8NDX2 589 aa16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 GPATCH3Q96I76 525 aa16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 SLC38A10Q9HBR0 1119 aa16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 XPNPEP3Q9NQH7 507 aa16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 STXBP5LQ9Y2K9 1186 aa16.21■□□□□ 0.19
CUEDC1-203ENST00000577422 CHD9Q3L8U1 2897 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 ADCY6O43306 1168 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 RAD21O60216 631 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 PGK1P00558 417 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 COPB2P35606 906 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 C9orf50Q5SZB4 431 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 CCSAPQ6IQ19 270 aaPredicted RBP16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 GMCL1P1Q8NEA9 526 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 BADQ92934 168 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 GUCD1Q96NT3 240 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 LBHD1Q9BQE6 289 aaPredicted RBP16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 SYNPO2Q9UMS6 1093 aa16.2■□□□□ 0.18
CUEDC1-203ENST00000577422 A0A1W2PQ45 241 aaPredicted RBP16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 A0A1W2PQY0 241 aa16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 RARBP10826 455 aa16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 TDO2P48775 406 aa16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 SHHQ15465 462 aa16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 ZMYM1Q5SVZ6 1142 aa16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 FAM109BQ6ICB4 259 aaPredicted RBP16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 MSL3Q8N5Y2 521 aaKnown RBP16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 NEDD1Q8NHV4 660 aa16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 TACC3Q9Y6A5 838 aa16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
CUEDC1-203ENST00000577422 TTLL1O95922 423 aa16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 AKR1A1P14550 325 aa16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 TLE2Q04725 743 aa16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 ZNF467Q7Z7K2 595 aaPredicted RBP16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 ZNF444Q8N0Y2 327 aaPredicted RBP16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 LRRC47Q8N1G4 583 aaKnown RBP16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 KLHDC9Q8NEP7 349 aa16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 RAVER2Q9HCJ3 691 aaKnown RBP16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 PRDM5Q9NQX1 630 aaPredicted RBP16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 SYNRGQ9UMZ2 1314 aa16.18■□□□□ 0.18
CUEDC1-203ENST00000577422 MYADML2A6NDP7 307 aa16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 APPP05067 770 aa16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 RNF180Q86T96 592 aa16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 CPXCR1Q8N123 301 aa16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 KIFC2Q96AC6 838 aa16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 KATNBL1Q9H079 304 aa16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 PRKAG2Q9UGJ0 569 aa16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 FEM1BQ9UK73 627 aa16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 ZNF536O15090 1300 aa16.17■□□□□ 0.18
CUEDC1-203ENST00000577422 OAZ1P54368 228 aa16.16■□□□□ 0.18
CUEDC1-203ENST00000577422 EPHB4P54760 987 aa16.16■□□□□ 0.18
CUEDC1-203ENST00000577422 PPARAQ07869 468 aa16.16■□□□□ 0.18
CUEDC1-203ENST00000577422 CCDC129Q6ZRS4 1044 aa16.16■□□□□ 0.18
CUEDC1-203ENST00000577422 INCENPQ9NQS7 918 aa16.16■□□□□ 0.18
CUEDC1-203ENST00000577422 IL17RBQ9NRM6 502 aa16.16■□□□□ 0.18
CUEDC1-203ENST00000577422 CUL9Q8IWT3 2517 aa16.16■□□□□ 0.18
CUEDC1-203ENST00000577422 MCM3APO60318 1980 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 DLL1O00548 723 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 KIAA0355O15063 1070 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 ERC2O15083 957 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 ZBED4O75132 1171 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 CLTBP09497 229 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 BMP3P12645 472 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 MX1P20591 662 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 NOVP48745 357 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 ACLYP53396 1101 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 TFAP4Q01664 338 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 FAAP100Q0VG06 881 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 SLFN13Q68D06 897 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 RASGRP2Q7LDG7 609 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 ANKRD33Q7Z3H0 272 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 TSEN34Q9BSV6 310 aaKnown RBP16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 FSD1Q9BTV5 496 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 CNPY2Q9Y2B0 182 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 MUC3AQ02505 3323 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 ASTN1O14525 1302 aa16.15■□□□□ 0.18
CUEDC1-203ENST00000577422 LRRC37A2A6NM11 1700 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 CTAGE5O15320 804 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 TSPY3P0CV98 308 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 TSPY8P0CW00 308 aa16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 CST5P28325 142 aaPredicted RBP16.14■□□□□ 0.17
CUEDC1-203ENST00000577422 ACVR2BQ13705 512 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms