RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 LENG1Q96BZ8 264 aaPredicted RBP20.51■□□□□ 0.87
ABR-236ENST00000577052 CCDC17Q96LX7 622 aa20.51■□□□□ 0.87
ABR-236ENST00000577052 ZNF214Q9UL59 606 aaPredicted RBP20.51■□□□□ 0.87
ABR-236ENST00000577052 PHF24Q9UPV7 400 aa20.51■□□□□ 0.87
ABR-236ENST00000577052 PGK1P00558 417 aa20.5■□□□□ 0.87
ABR-236ENST00000577052 ZNF865P0CJ78 1059 aaPredicted RBP20.5■□□□□ 0.87
ABR-236ENST00000577052 EPHB4P54760 987 aa20.5■□□□□ 0.87
ABR-236ENST00000577052 UBE3CQ15386 1083 aa20.5■□□□□ 0.87
ABR-236ENST00000577052 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
ABR-236ENST00000577052 MMP19Q99542 508 aa20.5■□□□□ 0.87
ABR-236ENST00000577052 IL25Q9H293 177 aa20.5■□□□□ 0.87
ABR-236ENST00000577052 PRKAG2Q9UGJ0 569 aa20.5■□□□□ 0.87
ABR-236ENST00000577052 PPP1R9AQ9ULJ8 1098 aa20.5■□□□□ 0.87
ABR-236ENST00000577052 VCANP13611 3396 aa20.5■□□□□ 0.87
ABR-236ENST00000577052 VWA5AO00534 786 aa20.49■□□□□ 0.87
ABR-236ENST00000577052 SLC25A27O95847 323 aa20.49■□□□□ 0.87
ABR-236ENST00000577052 TLE2Q04725 743 aa20.49■□□□□ 0.87
ABR-236ENST00000577052 FAM83BQ5T0W9 1011 aa20.49■□□□□ 0.87
ABR-236ENST00000577052 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.49■□□□□ 0.87
ABR-236ENST00000577052 CDX2Q99626 313 aaPredicted RBP20.49■□□□□ 0.87
ABR-236ENST00000577052 ESYT1Q9BSJ8 1104 aa20.49■□□□□ 0.87
ABR-236ENST00000577052 TTYH1Q9H313 450 aaPredicted RBP20.49■□□□□ 0.87
ABR-236ENST00000577052 SLC5A4Q9NY91 659 aa20.49■□□□□ 0.87
ABR-236ENST00000577052 SLC4A4Q9Y6R1 1079 aa20.49■□□□□ 0.87
ABR-236ENST00000577052 MFAP1P55081 439 aaKnown RBP20.48■□□□□ 0.87
ABR-236ENST00000577052 NUP88Q99567 741 aaPredicted RBP20.48■□□□□ 0.87
ABR-236ENST00000577052 TINF2Q9BSI4 451 aa20.48■□□□□ 0.87
ABR-236ENST00000577052 SEMA6BQ9H3T3 888 aa20.48■□□□□ 0.87
ABR-236ENST00000577052 SH2D4AQ9H788 454 aa20.48■□□□□ 0.87
ABR-236ENST00000577052 KANSL2Q9H9L4 492 aa20.48■□□□□ 0.87
ABR-236ENST00000577052 XPNPEP3Q9NQH7 507 aa20.48■□□□□ 0.87
ABR-236ENST00000577052 DIAPH3Q9NSV4 1193 aa20.48■□□□□ 0.87
ABR-236ENST00000577052 ROBO3Q96MS0 1386 aa20.47■□□□□ 0.87
ABR-236ENST00000577052 HIP1O00291 1037 aa20.47■□□□□ 0.87
ABR-236ENST00000577052 STAT3P40763 770 aa20.47■□□□□ 0.87
ABR-236ENST00000577052 NMIQ13287 307 aaPredicted RBP20.47■□□□□ 0.87
ABR-236ENST00000577052 ZNF697Q5TEC3 545 aa20.47■□□□□ 0.87
ABR-236ENST00000577052 NRBP1Q9UHY1 535 aa20.47■□□□□ 0.87
ABR-236ENST00000577052 RIPK3Q9Y572 518 aa20.47■□□□□ 0.87
ABR-236ENST00000577052 PRUNE2Q8WUY3 3088 aa20.46■□□□□ 0.87
ABR-236ENST00000577052 A0A0D9SFI3 127 aa20.46■□□□□ 0.87
ABR-236ENST00000577052 ADAMTS4O75173 837 aa20.46■□□□□ 0.87
ABR-236ENST00000577052 RASA1P20936 1047 aa20.46■□□□□ 0.87
ABR-236ENST00000577052 IRX5P78411 483 aaPredicted RBP20.46■□□□□ 0.87
ABR-236ENST00000577052 TICAM2Q86XR7 235 aa20.46■□□□□ 0.87
ABR-236ENST00000577052 FAM227BQ96M60 508 aa20.46■□□□□ 0.87
ABR-236ENST00000577052 STRBPQ96SI9 672 aaKnown RBP20.46■□□□□ 0.87
ABR-236ENST00000577052 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.46■□□□□ 0.87
ABR-236ENST00000577052 DIS3Q9Y2L1 958 aaKnown RBP20.46■□□□□ 0.87
ABR-236ENST00000577052 SPTBN5Q9NRC6 3674 aaKnown RBP20.46■□□□□ 0.87
ABR-236ENST00000577052 A0A1W2PQ45 241 aaPredicted RBP20.45■□□□□ 0.86
ABR-236ENST00000577052 A0A1W2PQY0 241 aa20.45■□□□□ 0.86
ABR-236ENST00000577052 GSG1L2A8MUP6 293 aa20.45■□□□□ 0.86
ABR-236ENST00000577052 SGSM2O43147 1006 aa20.45■□□□□ 0.86
ABR-236ENST00000577052 SNAI1O95863 264 aaPredicted RBP20.45■□□□□ 0.86
ABR-236ENST00000577052 RARBP10826 455 aa20.45■□□□□ 0.86
ABR-236ENST00000577052 CWC27Q6UX04 472 aaKnown RBP20.45■□□□□ 0.86
ABR-236ENST00000577052 STK11IPQ8N1F8 1099 aa20.45■□□□□ 0.86
ABR-236ENST00000577052 RAD50Q92878 1312 aa20.45■□□□□ 0.86
ABR-236ENST00000577052 MYADML2A6NDP7 307 aa20.44■□□□□ 0.86
ABR-236ENST00000577052 FGD4Q96M96 766 aa20.44■□□□□ 0.86
ABR-236ENST00000577052 MCM3APO60318 1980 aa20.44■□□□□ 0.86
ABR-236ENST00000577052 DNAJC25-GNG10A0A024R161 153 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 IGKV6D-41A0A0C4DH26 115 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 KIAA0355O15063 1070 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 RNF113AO15541 343 aaKnown RBP20.43■□□□□ 0.86
ABR-236ENST00000577052 ADCY6O43306 1168 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 CLTBP09497 229 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 SMAD3P84022 425 aaKnown RBP20.43■□□□□ 0.86
ABR-236ENST00000577052 KCTD2Q14681 263 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 SBK1Q52WX2 424 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 ZMYM1Q5SVZ6 1142 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 CCSAPQ6IQ19 270 aaPredicted RBP20.43■□□□□ 0.86
ABR-236ENST00000577052 KLHDC9Q8NEP7 349 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 MYLIPQ8WY64 445 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 OSBP2Q969R2 916 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 EPB41L4AQ9HCS5 686 aaPredicted RBP20.43■□□□□ 0.86
ABR-236ENST00000577052 GOPCQ9HD26 462 aa20.43■□□□□ 0.86
ABR-236ENST00000577052 RAD21O60216 631 aa20.42■□□□□ 0.86
ABR-236ENST00000577052 NDUFB10O96000 172 aa20.42■□□□□ 0.86
ABR-236ENST00000577052 AKR1A1P14550 325 aa20.42■□□□□ 0.86
ABR-236ENST00000577052 FAAP100Q0VG06 881 aa20.42■□□□□ 0.86
ABR-236ENST00000577052 RUFY2Q8WXA3 655 aa20.42■□□□□ 0.86
ABR-236ENST00000577052 SLF1Q9BQI6 1058 aa20.42■□□□□ 0.86
ABR-236ENST00000577052 ARPP21Q9UBL0 812 aaPredicted RBP20.42■□□□□ 0.86
ABR-236ENST00000577052 TACC3Q9Y6A5 838 aa20.42■□□□□ 0.86
ABR-236ENST00000577052 MYH4Q9Y623 1939 aa20.42■□□□□ 0.86
ABR-236ENST00000577052 SYNRGQ9UMZ2 1314 aa20.42■□□□□ 0.86
ABR-236ENST00000577052 F5H6K3 240 aa20.41■□□□□ 0.86
ABR-236ENST00000577052 PQBP1O60828 265 aaKnown RBP20.41■□□□□ 0.86
ABR-236ENST00000577052 ZFYP08048 801 aaPredicted RBP20.41■□□□□ 0.86
ABR-236ENST00000577052 KLRC3Q07444 240 aa20.41■□□□□ 0.86
ABR-236ENST00000577052 SNRNP48Q6IEG0 339 aaKnown RBP20.41■□□□□ 0.86
ABR-236ENST00000577052 RNF180Q86T96 592 aa20.41■□□□□ 0.86
ABR-236ENST00000577052 SEC62Q99442 399 aaKnown RBP20.41■□□□□ 0.86
ABR-236ENST00000577052 NYAP2Q9P242 653 aa20.41■□□□□ 0.86
ABR-236ENST00000577052 EIF5BO60841 1220 aaKnown RBP20.4■□□□□ 0.86
ABR-236ENST00000577052 REC8O95072 547 aa20.4■□□□□ 0.86
ABR-236ENST00000577052 ACLYP53396 1101 aa20.4■□□□□ 0.86
ABR-236ENST00000577052 LRRFIP1Q32MZ4 808 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms