RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 C20orf194Q5TEA3 1177 aa23.77■■□□□ 1.4
SLC12A4-217ENST00000576462 CPXCR1Q8N123 301 aa23.77■■□□□ 1.4
SLC12A4-217ENST00000576462 ECHDC1Q9NTX5 307 aa23.77■■□□□ 1.4
SLC12A4-217ENST00000576462 RCAN3Q9UKA8 241 aa23.77■■□□□ 1.4
SLC12A4-217ENST00000576462 RIPK3Q9Y572 518 aa23.77■■□□□ 1.4
SLC12A4-217ENST00000576462 PLXNA1Q9UIW2 1896 aa23.77■■□□□ 1.4
SLC12A4-217ENST00000576462 EYSQ5T1H1 3165 aa23.77■■□□□ 1.39
SLC12A4-217ENST00000576462 RAG1P15918 1043 aa23.76■■□□□ 1.39
SLC12A4-217ENST00000576462 EPHB4P54760 987 aa23.76■■□□□ 1.39
SLC12A4-217ENST00000576462 TSHZ3Q63HK5 1081 aa23.76■■□□□ 1.39
SLC12A4-217ENST00000576462 NYAP2Q9P242 653 aa23.76■■□□□ 1.39
SLC12A4-217ENST00000576462 CLIP2Q9UDT6 1046 aa23.76■■□□□ 1.39
SLC12A4-217ENST00000576462 ZHX1Q9UKY1 873 aaPredicted RBP23.76■■□□□ 1.39
SLC12A4-217ENST00000576462 CTDP1Q9Y5B0 961 aaPredicted RBP23.76■■□□□ 1.39
SLC12A4-217ENST00000576462 ADAMTS4O75173 837 aa23.75■■□□□ 1.39
SLC12A4-217ENST00000576462 SMAD3P84022 425 aaKnown RBP23.75■■□□□ 1.39
SLC12A4-217ENST00000576462 OSBP2Q969R2 916 aa23.75■■□□□ 1.39
SLC12A4-217ENST00000576462 KIFC2Q96AC6 838 aa23.75■■□□□ 1.39
SLC12A4-217ENST00000576462 RNPC3Q96LT9 517 aaKnown RBP23.75■■□□□ 1.39
SLC12A4-217ENST00000576462 TMEM39AQ9NV64 488 aa23.75■■□□□ 1.39
SLC12A4-217ENST00000576462 ROBO3Q96MS0 1386 aa23.75■■□□□ 1.39
SLC12A4-217ENST00000576462 PRDM1O75626 825 aa23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 ACLYP53396 1101 aa23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 KBTBD3Q8NAB2 608 aa23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 PRPF38AQ8NAV1 312 aaKnown RBP23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 MYLIPQ8WY64 445 aa23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 APPBP2Q92624 585 aa23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 TTYH1Q9H313 450 aaPredicted RBP23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 STARD7Q9NQZ5 370 aa23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 FAM184BQ9ULE4 1060 aa23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 SYNRGQ9UMZ2 1314 aa23.74■■□□□ 1.39
SLC12A4-217ENST00000576462 KIAA0355O15063 1070 aa23.73■■□□□ 1.39
SLC12A4-217ENST00000576462 ZBED4O75132 1171 aa23.73■■□□□ 1.39
SLC12A4-217ENST00000576462 SNAI1O95863 264 aaPredicted RBP23.73■■□□□ 1.39
SLC12A4-217ENST00000576462 APPP05067 770 aa23.73■■□□□ 1.39
SLC12A4-217ENST00000576462 TDO2P48775 406 aa23.73■■□□□ 1.39
SLC12A4-217ENST00000576462 GIMAP6Q6P9H5 292 aa23.73■■□□□ 1.39
SLC12A4-217ENST00000576462 MAFAQ8NHW3 353 aaPredicted RBP23.73■■□□□ 1.39
SLC12A4-217ENST00000576462 RAVER2Q9HCJ3 691 aaKnown RBP23.73■■□□□ 1.39
SLC12A4-217ENST00000576462 EPB41L4AQ9HCS5 686 aaPredicted RBP23.73■■□□□ 1.39
SLC12A4-217ENST00000576462 GREB1LQ9C091 1923 aaPredicted RBP23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 RNF113AO15541 343 aaKnown RBP23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 GPAA1O43292 621 aa23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 ZNF444Q8N0Y2 327 aaPredicted RBP23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 LRRC47Q8N1G4 583 aaKnown RBP23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 MSL3Q8N5Y2 521 aaKnown RBP23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 GPATCH3Q96I76 525 aa23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 TSEN34Q9BSV6 310 aaKnown RBP23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 SYNGAP1Q96PV0 1343 aa23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 CDH23Q9H251 3354 aa23.72■■□□□ 1.39
SLC12A4-217ENST00000576462 DNAJC25-GNG10A0A024R161 153 aa23.71■■□□□ 1.39
SLC12A4-217ENST00000576462 MYADML2A6NDP7 307 aa23.71■■□□□ 1.39
SLC12A4-217ENST00000576462 IRX5P78411 483 aaPredicted RBP23.71■■□□□ 1.39
SLC12A4-217ENST00000576462 FPGSQ05932 587 aa23.71■■□□□ 1.39
SLC12A4-217ENST00000576462 FAAP100Q0VG06 881 aa23.71■■□□□ 1.39
SLC12A4-217ENST00000576462 KCNA10Q16322 511 aa23.71■■□□□ 1.39
SLC12A4-217ENST00000576462 ANKRD35Q8N283 1001 aa23.71■■□□□ 1.39
SLC12A4-217ENST00000576462 NUP133Q8WUM0 1156 aa23.71■■□□□ 1.39
SLC12A4-217ENST00000576462 CEP95Q96GE4 821 aa23.71■■□□□ 1.39
SLC12A4-217ENST00000576462 IGKV6D-41A0A0C4DH26 115 aa23.7■■□□□ 1.38
SLC12A4-217ENST00000576462 DCDC2CA8MYV0 355 aa23.7■■□□□ 1.38
SLC12A4-217ENST00000576462 M0R2C6 588 aa23.7■■□□□ 1.38
SLC12A4-217ENST00000576462 MAMDC4Q6UXC1 1216 aa23.7■■□□□ 1.38
SLC12A4-217ENST00000576462 KLHDC9Q8NEP7 349 aa23.7■■□□□ 1.38
SLC12A4-217ENST00000576462 ISY1Q9ULR0 285 aaKnown RBP23.7■■□□□ 1.38
SLC12A4-217ENST00000576462 MOXD2PA6NHM9 499 aa23.69■■□□□ 1.38
SLC12A4-217ENST00000576462 ACVR2BQ13705 512 aa23.69■■□□□ 1.38
SLC12A4-217ENST00000576462 ANKRD33Q7Z3H0 272 aa23.69■■□□□ 1.38
SLC12A4-217ENST00000576462 CHMP4CQ96CF2 233 aa23.69■■□□□ 1.38
SLC12A4-217ENST00000576462 SLC38A10Q9HBR0 1119 aa23.69■■□□□ 1.38
SLC12A4-217ENST00000576462 ZNF287Q9HBT7 754 aa23.69■■□□□ 1.38
SLC12A4-217ENST00000576462 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.69■■□□□ 1.38
SLC12A4-217ENST00000576462 ATP2A1O14983 1001 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 DUSP11O75319 330 aaKnown RBP23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 C6orf222P0C671 652 aaPredicted RBP23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 FOSL2P15408 326 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 GNAT2P19087 354 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 VTI1AQ96AJ9 217 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 GLT1D1Q96MS3 346 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 TOX2Q96NM4 488 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 HOMER2Q9NSB8 354 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 MTMR4Q9NYA4 1195 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 FEM1BQ9UK73 627 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 VCANP13611 3396 aa23.68■■□□□ 1.38
SLC12A4-217ENST00000576462 ADCY6O43306 1168 aa23.67■■□□□ 1.38
SLC12A4-217ENST00000576462 TTLL1O95922 423 aa23.67■■□□□ 1.38
SLC12A4-217ENST00000576462 ZFYP08048 801 aaPredicted RBP23.67■■□□□ 1.38
SLC12A4-217ENST00000576462 SLFN13Q68D06 897 aa23.67■■□□□ 1.38
SLC12A4-217ENST00000576462 CCSAPQ6IQ19 270 aaPredicted RBP23.67■■□□□ 1.38
SLC12A4-217ENST00000576462 ZNF467Q7Z7K2 595 aaPredicted RBP23.67■■□□□ 1.38
SLC12A4-217ENST00000576462 IFNL3Q8IZI9 196 aa23.67■■□□□ 1.38
SLC12A4-217ENST00000576462 MKL1Q969V6 931 aa23.67■■□□□ 1.38
SLC12A4-217ENST00000576462 PATL2C9JE40 543 aaKnown RBP23.66■■□□□ 1.38
SLC12A4-217ENST00000576462 TSPY3P0CV98 308 aa23.66■■□□□ 1.38
SLC12A4-217ENST00000576462 TSPY8P0CW00 308 aa23.66■■□□□ 1.38
SLC12A4-217ENST00000576462 CCDC144BQ3MJ40 725 aa23.66■■□□□ 1.38
SLC12A4-217ENST00000576462 FGD4Q96M96 766 aa23.66■■□□□ 1.38
SLC12A4-217ENST00000576462 DCTPP1Q9H773 170 aa23.66■■□□□ 1.38
SLC12A4-217ENST00000576462 SPC25Q9HBM1 224 aa23.66■■□□□ 1.38
SLC12A4-217ENST00000576462 FBXO40Q9UH90 709 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms