RNA–Protein interactions for RNA: ENST00000576335.5

TRAP1-216, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-216ENST00000576335 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
TRAP1-216ENST00000576335 BEGAINQ9BUH8 593 aa13.02□□□□□ -0.33
TRAP1-216ENST00000576335 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.33
TRAP1-216ENST00000576335 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.33
TRAP1-216ENST00000576335 RPAP3Q9H6T3 665 aaPredicted RBP13.02□□□□□ -0.33
TRAP1-216ENST00000576335 HOXC10Q9NYD6 342 aa13.02□□□□□ -0.33
TRAP1-216ENST00000576335 MTMR7Q9Y216 660 aa13.02□□□□□ -0.33
TRAP1-216ENST00000576335 TMEM232C9JQI7 657 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 LARGE1O95461 756 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 RXRAP19793 462 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 CDC27P30260 824 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 COG2Q14746 738 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 CATSPERGQ6ZRH7 1159 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 KCTD1Q719H9 257 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 CCDC83Q8IWF9 413 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 CCDC144CPQ8IYA2 1237 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 MB21D1Q8N884 522 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 JMYQ8N9B5 988 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 RRP36Q96EU6 259 aaKnown RBP13.01□□□□□ -0.33
TRAP1-216ENST00000576335 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 LARP6Q9BRS8 491 aaKnown RBP13.01□□□□□ -0.33
TRAP1-216ENST00000576335 RIOX1Q9H6W3 641 aa13.01□□□□□ -0.33
TRAP1-216ENST00000576335 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
TRAP1-216ENST00000576335 SEC63Q9UGP8 760 aaKnown RBP13.01□□□□□ -0.33
TRAP1-216ENST00000576335 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
TRAP1-216ENST00000576335 FAM155AB1AL88 458 aaPredicted RBP13□□□□□ -0.33
TRAP1-216ENST00000576335 FLOT1O75955 427 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 DEXIO95424 95 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 FMNL1O95466 1100 aaPredicted RBP13□□□□□ -0.33
TRAP1-216ENST00000576335 GOLGA8HP0CJ92 632 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 ADD1P35611 737 aaKnown RBP13□□□□□ -0.33
TRAP1-216ENST00000576335 IRX3P78415 501 aaPredicted RBP13□□□□□ -0.33
TRAP1-216ENST00000576335 SSRP1Q08945 709 aaKnown RBP13□□□□□ -0.33
TRAP1-216ENST00000576335 SYDE2Q5VT97 1194 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 LBX2Q6XYB7 198 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 TEX2Q8IWB9 1127 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 STAG2Q8N3U4 1231 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 NECAB1Q8N987 351 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 GPCPD1Q9NPB8 672 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 PPP1R9AQ9ULJ8 1098 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
TRAP1-216ENST00000576335 PTPRFP10586 1907 aa13□□□□□ -0.33
TRAP1-216ENST00000576335 CNTNAP5Q8WYK1 1306 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 PTPDC1A2A3K4 754 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 PRPF3O43395 683 aaKnown RBP12.99□□□□□ -0.33
TRAP1-216ENST00000576335 AOC2O75106 756 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 PLEKHA8P1O95397 391 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 ALDH1A1P00352 501 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 XBP1P17861 261 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 MAP2K2P36507 400 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 OAZ1P54368 228 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 MAP2K1Q02750 393 aaPredicted RBP12.99□□□□□ -0.33
TRAP1-216ENST00000576335 MOGSQ13724 837 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 NTRK3Q16288 839 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 KIAA1755Q5JYT7 1200 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 RAB11FIP4Q86YS3 637 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 SRBD1Q8N5C6 995 aaKnown RBP12.99□□□□□ -0.33
TRAP1-216ENST00000576335 NSUN7Q8NE18 718 aaKnown RBP12.99□□□□□ -0.33
TRAP1-216ENST00000576335 SMARCC2Q8TAQ2 1214 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 PARK7Q99497 189 aaKnown RBP12.99□□□□□ -0.33
TRAP1-216ENST00000576335 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
TRAP1-216ENST00000576335 NCOA5Q9HCD5 579 aaKnown RBP12.99□□□□□ -0.33
TRAP1-216ENST00000576335 CWC22Q9HCG8 908 aaKnown RBP12.99□□□□□ -0.33
TRAP1-216ENST00000576335 SMC3Q9UQE7 1217 aa12.99□□□□□ -0.33
TRAP1-216ENST00000576335 PNMA6FA0A0J9YX94 578 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 ZBTB5O15062 677 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 ZBED4O75132 1171 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 PDCP20941 246 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 DSG3P32926 999 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 TM4SF4P48230 202 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 FUT2Q10981 343 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 TREML2Q5T2D2 321 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 ADGRF4Q8IZF3 695 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 FAM184AQ8NB25 1140 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
TRAP1-216ENST00000576335 BRI3BPQ8WY22 251 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 KIFC2Q96AC6 838 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 MTMR8Q96EF0 704 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 SLC26A6Q9BXS9 759 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 MAF1Q9H063 256 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 RANBP17Q9H2T7 1088 aaKnown RBP12.98□□□□□ -0.33
TRAP1-216ENST00000576335 PRR12Q9ULL5 1215 aa12.98□□□□□ -0.33
TRAP1-216ENST00000576335 BTBD19C9JJ37 291 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 PDHXO00330 501 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 HSPA1AP0DMV8 641 aaKnown RBP12.97□□□□□ -0.33
TRAP1-216ENST00000576335 HSPA1BP0DMV9 641 aaKnown RBP12.97□□□□□ -0.33
TRAP1-216ENST00000576335 COPB2P35606 906 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 GCLCP48506 637 aaPredicted RBP12.97□□□□□ -0.33
TRAP1-216ENST00000576335 ST3GAL1Q11201 340 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 MKRN3Q13064 507 aaKnown RBP12.97□□□□□ -0.33
TRAP1-216ENST00000576335 TTBK2Q6IQ55 1244 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 GPAT2Q6NUI2 795 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 PPP1R18Q6NYC8 613 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 RASGRP2Q7LDG7 609 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 CCDC148Q8NFR7 591 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
TRAP1-216ENST00000576335 JMJD4Q9H9V9 463 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms