RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 SNRNP48Q6IEG0 339 aaKnown RBP17.59■□□□□ 0.41
TSR1-204ENST00000576112 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.59■□□□□ 0.41
TSR1-204ENST00000576112 DIS3Q9Y2L1 958 aaKnown RBP17.59■□□□□ 0.41
TSR1-204ENST00000576112 LCTP09848 1927 aa17.59■□□□□ 0.41
TSR1-204ENST00000576112 IGKV6D-41A0A0C4DH26 115 aa17.58■□□□□ 0.4
TSR1-204ENST00000576112 MYADML2A6NDP7 307 aa17.58■□□□□ 0.4
TSR1-204ENST00000576112 MINDY4BA8MYZ0 360 aa17.58■□□□□ 0.4
TSR1-204ENST00000576112 M0R2C6 588 aa17.58■□□□□ 0.4
TSR1-204ENST00000576112 PQBP1O60828 265 aaKnown RBP17.58■□□□□ 0.4
TSR1-204ENST00000576112 AKR1A1P14550 325 aa17.58■□□□□ 0.4
TSR1-204ENST00000576112 KBTBD3Q8NAB2 608 aa17.58■□□□□ 0.4
TSR1-204ENST00000576112 CDX2Q99626 313 aaPredicted RBP17.58■□□□□ 0.4
TSR1-204ENST00000576112 COL25A1Q9BXS0 654 aaPredicted RBP17.58■□□□□ 0.4
TSR1-204ENST00000576112 TEX13BQ9BXU2 312 aa17.58■□□□□ 0.4
TSR1-204ENST00000576112 TTYH1Q9H313 450 aaPredicted RBP17.58■□□□□ 0.4
TSR1-204ENST00000576112 ECHDC1Q9NTX5 307 aa17.58■□□□□ 0.4
TSR1-204ENST00000576112 DNAJC25-GNG10A0A024R161 153 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 F5H6K3 240 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 ADCY6O43306 1168 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 PRDM1O75626 825 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 SNAI1O95863 264 aaPredicted RBP17.57■□□□□ 0.4
TSR1-204ENST00000576112 CLTBP09497 229 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 KLRC3Q07444 240 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 RNF180Q86T96 592 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 APPBP2Q92624 585 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 FGD4Q96M96 766 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 NYAP2Q9P242 653 aa17.57■□□□□ 0.4
TSR1-204ENST00000576112 GPAA1O43292 621 aa17.56■□□□□ 0.4
TSR1-204ENST00000576112 COPB2P35606 906 aa17.56■□□□□ 0.4
TSR1-204ENST00000576112 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
TSR1-204ENST00000576112 CPXCR1Q8N123 301 aa17.56■□□□□ 0.4
TSR1-204ENST00000576112 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
TSR1-204ENST00000576112 CEP95Q96GE4 821 aa17.56■□□□□ 0.4
TSR1-204ENST00000576112 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
TSR1-204ENST00000576112 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
TSR1-204ENST00000576112 CNPY2Q9Y2B0 182 aa17.56■□□□□ 0.4
TSR1-204ENST00000576112 SYNGAP1Q96PV0 1343 aa17.55■□□□□ 0.4
TSR1-204ENST00000576112 KIAA0355O15063 1070 aa17.55■□□□□ 0.4
TSR1-204ENST00000576112 ACLYP53396 1101 aa17.55■□□□□ 0.4
TSR1-204ENST00000576112 SMAD3P84022 425 aaKnown RBP17.55■□□□□ 0.4
TSR1-204ENST00000576112 GIMAP6Q6P9H5 292 aa17.55■□□□□ 0.4
TSR1-204ENST00000576112 MYLIPQ8WY64 445 aa17.55■□□□□ 0.4
TSR1-204ENST00000576112 KIFC2Q96AC6 838 aa17.55■□□□□ 0.4
TSR1-204ENST00000576112 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
TSR1-204ENST00000576112 RAVER2Q9HCJ3 691 aaKnown RBP17.55■□□□□ 0.4
TSR1-204ENST00000576112 ZHX1Q9UKY1 873 aaPredicted RBP17.55■□□□□ 0.4
TSR1-204ENST00000576112 TACC3Q9Y6A5 838 aa17.55■□□□□ 0.4
TSR1-204ENST00000576112 PLIN4Q96Q06 1357 aa17.54■□□□□ 0.4
TSR1-204ENST00000576112 RNF113AO15541 343 aaKnown RBP17.54■□□□□ 0.4
TSR1-204ENST00000576112 TDO2P48775 406 aa17.54■□□□□ 0.4
TSR1-204ENST00000576112 FAAP100Q0VG06 881 aa17.54■□□□□ 0.4
TSR1-204ENST00000576112 CCSAPQ6IQ19 270 aaPredicted RBP17.54■□□□□ 0.4
TSR1-204ENST00000576112 MAMDC4Q6UXC1 1216 aa17.54■□□□□ 0.4
TSR1-204ENST00000576112 KLHDC9Q8NEP7 349 aa17.54■□□□□ 0.4
TSR1-204ENST00000576112 RNPC3Q96LT9 517 aaKnown RBP17.54■□□□□ 0.4
TSR1-204ENST00000576112 CHMP4BQ9H444 224 aaKnown RBP17.54■□□□□ 0.4
TSR1-204ENST00000576112 GBF1Q92538 1859 aa17.54■□□□□ 0.4
TSR1-204ENST00000576112 ATP2A1O14983 1001 aa17.53■□□□□ 0.4
TSR1-204ENST00000576112 KCNA10Q16322 511 aa17.53■□□□□ 0.4
TSR1-204ENST00000576112 MSL3Q8N5Y2 521 aaKnown RBP17.53■□□□□ 0.4
TSR1-204ENST00000576112 PRPF38AQ8NAV1 312 aaKnown RBP17.53■□□□□ 0.4
TSR1-204ENST00000576112 MAFAQ8NHW3 353 aaPredicted RBP17.53■□□□□ 0.4
TSR1-204ENST00000576112 DDX11Q96FC9 970 aa17.53■□□□□ 0.4
TSR1-204ENST00000576112 SEC62Q99442 399 aaKnown RBP17.53■□□□□ 0.4
TSR1-204ENST00000576112 SLC38A10Q9HBR0 1119 aa17.53■□□□□ 0.4
TSR1-204ENST00000576112 STARD7Q9NQZ5 370 aa17.53■□□□□ 0.4
TSR1-204ENST00000576112 MTMR4Q9NYA4 1195 aa17.53■□□□□ 0.4
TSR1-204ENST00000576112 RAG1P15918 1043 aa17.52■□□□□ 0.4
TSR1-204ENST00000576112 FPGSQ05932 587 aa17.52■□□□□ 0.4
TSR1-204ENST00000576112 RASGRP2Q7LDG7 609 aa17.52■□□□□ 0.4
TSR1-204ENST00000576112 ANKRD33Q7Z3H0 272 aa17.52■□□□□ 0.4
TSR1-204ENST00000576112 TSEN34Q9BSV6 310 aaKnown RBP17.52■□□□□ 0.4
TSR1-204ENST00000576112 DCTPP1Q9H773 170 aa17.52■□□□□ 0.4
TSR1-204ENST00000576112 TMEM39AQ9NV64 488 aa17.52■□□□□ 0.4
TSR1-204ENST00000576112 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.52■□□□□ 0.4
TSR1-204ENST00000576112 FAM184BQ9ULE4 1060 aa17.52■□□□□ 0.4
TSR1-204ENST00000576112 CHD9Q3L8U1 2897 aa17.51■□□□□ 0.39
TSR1-204ENST00000576112 ZBED4O75132 1171 aa17.51■□□□□ 0.39
TSR1-204ENST00000576112 ACVR2BQ13705 512 aa17.51■□□□□ 0.39
TSR1-204ENST00000576112 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.51■□□□□ 0.39
TSR1-204ENST00000576112 ZNF467Q7Z7K2 595 aaPredicted RBP17.51■□□□□ 0.39
TSR1-204ENST00000576112 OTUD7AQ8TE49 926 aaPredicted RBP17.51■□□□□ 0.39
TSR1-204ENST00000576112 MKL1Q969V6 931 aa17.51■□□□□ 0.39
TSR1-204ENST00000576112 CHMP4CQ96CF2 233 aa17.51■□□□□ 0.39
TSR1-204ENST00000576112 KATNBL1Q9H079 304 aa17.51■□□□□ 0.39
TSR1-204ENST00000576112 HOMER2Q9NSB8 354 aa17.51■□□□□ 0.39
TSR1-204ENST00000576112 TBX21Q9UL17 535 aa17.51■□□□□ 0.39
TSR1-204ENST00000576112 TTC28Q96AY4 2481 aa17.5■□□□□ 0.39
TSR1-204ENST00000576112 MOXD2PA6NHM9 499 aa17.5■□□□□ 0.39
TSR1-204ENST00000576112 DUSP11O75319 330 aaKnown RBP17.5■□□□□ 0.39
TSR1-204ENST00000576112 TTLL1O95922 423 aa17.5■□□□□ 0.39
TSR1-204ENST00000576112 APPP05067 770 aa17.5■□□□□ 0.39
TSR1-204ENST00000576112 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
TSR1-204ENST00000576112 C6orf222P0C671 652 aaPredicted RBP17.5■□□□□ 0.39
TSR1-204ENST00000576112 PTGS1P23219 599 aa17.5■□□□□ 0.39
TSR1-204ENST00000576112 CST5P28325 142 aaPredicted RBP17.5■□□□□ 0.39
TSR1-204ENST00000576112 CNTN2Q02246 1040 aa17.5■□□□□ 0.39
TSR1-204ENST00000576112 CCDC144BQ3MJ40 725 aa17.5■□□□□ 0.39
TSR1-204ENST00000576112 ARMCX2Q7L311 632 aa17.5■□□□□ 0.39
TSR1-204ENST00000576112 IFNL3Q8IZI9 196 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms