RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 PNMA3Q9UL41 463 aa10□□□□□ -0.81
NUP88-211ENST00000575976 NAP1L2Q9ULW6 460 aaPredicted RBP10□□□□□ -0.81
NUP88-211ENST00000575976 PALM3A6NDB9 673 aaPredicted RBP9.99□□□□□ -0.81
NUP88-211ENST00000575976 SPDYE16A6NNV3 312 aaPredicted RBP9.99□□□□□ -0.81
NUP88-211ENST00000575976 ZBTB43O43298 467 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 PEX10O60683 326 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 PLA2G6O60733 806 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 CALM1P0DP23 149 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 CALM2P0DP24 149 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 CALM3P0DP25 149 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 STAT2P52630 851 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 SOX10P56693 466 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 EVCP57679 992 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 HERVK_113P62684 666 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 IKQ13123 557 aaPredicted RBP9.99□□□□□ -0.81
NUP88-211ENST00000575976 RABEP1Q15276 862 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 ASPRV1Q53RT3 343 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
NUP88-211ENST00000575976 POTEEQ6S8J3 1075 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 BTNL9Q6UXG8 535 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 NOL8Q76FK4 1167 aaKnown RBP9.99□□□□□ -0.81
NUP88-211ENST00000575976 FAM160B2Q86V87 743 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 MICU3Q86XE3 530 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 CTCFLQ8NI51 663 aaPredicted RBP9.99□□□□□ -0.81
NUP88-211ENST00000575976 SMCR8Q8TEV9 937 aaPredicted RBP9.99□□□□□ -0.81
NUP88-211ENST00000575976 CHURC1Q8WUH1 139 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 KIFC2Q96AC6 838 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 ATG4CQ96DT6 458 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 MAP3K14Q99558 947 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 SLF1Q9BQI6 1058 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 HOXC10Q9NYD6 342 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 PPP1R9AQ9ULJ8 1098 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 ADGRA2Q96PE1 1338 aa9.99□□□□□ -0.81
NUP88-211ENST00000575976 GOLGA8AA7E2F4 631 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 GOLGA8BA8MQT2 603 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 KLRF2D3W0D1 207 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 TLR2O60603 784 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 PDIA3P30101 505 aaKnown RBP9.98□□□□□ -0.81
NUP88-211ENST00000575976 CDC27P30260 824 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 SNAP25P60880 206 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 ANKRD1Q15327 319 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 RTN1Q16799 776 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 SLC35G1Q2M3R5 365 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 SYDE2Q5VT97 1194 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 C17orf99Q6UX52 265 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 NBPF11Q86T75 865 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 PRPF38AQ8NAV1 312 aaKnown RBP9.98□□□□□ -0.81
NUP88-211ENST00000575976 FANCBQ8NB91 859 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 CFHR5Q9BXR6 569 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 VAT1LQ9HCJ6 419 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 FAM217BQ9NTX9 383 aaPredicted RBP9.98□□□□□ -0.81
NUP88-211ENST00000575976 SAGE1Q9NXZ1 904 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 RBPJLQ9UBG7 517 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 CPA4Q9UI42 421 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 PRR12Q9ULL5 1215 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 TPCN1Q9ULQ1 816 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 ADAMTS5Q9UNA0 930 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 MYPNQ86TC9 1320 aa9.98□□□□□ -0.81
NUP88-211ENST00000575976 VWA5AO00534 786 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 CNMDO75829 334 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 PLEKHA8P1O95397 391 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 KIF5BP33176 963 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 ADD1P35611 737 aaKnown RBP9.97□□□□□ -0.81
NUP88-211ENST00000575976 GCLCP48506 637 aaPredicted RBP9.97□□□□□ -0.81
NUP88-211ENST00000575976 METAP2P50579 478 aaKnown RBP eCLIP9.97□□□□□ -0.81
NUP88-211ENST00000575976 RCAN1P53805 252 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 CCT2P78371 535 aaKnown RBP9.97□□□□□ -0.81
NUP88-211ENST00000575976 STK3Q13188 491 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 Q3C1V9 767 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 LBX2Q6XYB7 198 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 ADGRF4Q8IZF3 695 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 CMTR1Q8N1G2 835 aaKnown RBP9.97□□□□□ -0.81
NUP88-211ENST00000575976 SRBD1Q8N5C6 995 aaKnown RBP9.97□□□□□ -0.81
NUP88-211ENST00000575976 ANKRD13CQ8N6S4 541 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 REPS2Q8NFH8 660 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 ZNF274Q96GC6 653 aaPredicted RBP9.97□□□□□ -0.81
NUP88-211ENST00000575976 PAGR1Q9BTK6 254 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 TXNRD2Q9NNW7 524 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 RBM28Q9NW13 759 aaKnown RBP9.97□□□□□ -0.81
NUP88-211ENST00000575976 BTBD7Q9P203 1132 aa9.97□□□□□ -0.81
NUP88-211ENST00000575976 RLFQ13129 1914 aa9.96□□□□□ -0.81
NUP88-211ENST00000575976 CYTH3O43739 400 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 ST18O60284 1047 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 ZBED4O75132 1171 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 CD2BP2O95400 341 aaKnown RBP9.96□□□□□ -0.82
NUP88-211ENST00000575976 LARGE1O95461 756 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 BCRP11274 1271 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 GNAQP50148 359 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 TMEM132BQ14DG7 1078 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 ME3Q16798 604 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 TMTC3Q6ZXV5 915 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 CCDC82Q8N4S0 544 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 GTF3C2Q8WUA4 911 aaPredicted RBP9.96□□□□□ -0.82
NUP88-211ENST00000575976 RANBP17Q9H2T7 1088 aaKnown RBP9.96□□□□□ -0.82
NUP88-211ENST00000575976 RIOX1Q9H6W3 641 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 JMJD4Q9H9V9 463 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 SLC38A10Q9HBR0 1119 aa9.96□□□□□ -0.82
NUP88-211ENST00000575976 NCOA5Q9HCD5 579 aaKnown RBP9.96□□□□□ -0.82
NUP88-211ENST00000575976 RAVER2Q9HCJ3 691 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms