RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 ZC3H4Q9UPT8 1303 aaKnown RBP21.32■■□□□ 1
SPNS3-204ENST00000575194 CCDC194A0A1B0GVG4 234 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 STXBP3O00186 592 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 GMPSP49915 693 aaPredicted RBP21.32■■□□□ 1
SPNS3-204ENST00000575194 MMP14P50281 582 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 GRIN1Q05586 938 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 POSTNQ15063 836 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 ZNF174Q15697 407 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 ASPRV1Q53RT3 343 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 SPECC1Q5M775 1068 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 APOBEC3HQ6NTF7 200 aaKnown RBP21.32■■□□□ 1
SPNS3-204ENST00000575194 MTMR4Q9NYA4 1195 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 CLIP2Q9UDT6 1046 aa21.32■■□□□ 1
SPNS3-204ENST00000575194 GREB1LQ9C091 1923 aaPredicted RBP21.32■■□□□ 1
SPNS3-204ENST00000575194 IGKV6D-41A0A0C4DH26 115 aa21.31■■□□□ 1
SPNS3-204ENST00000575194 OGFOD1Q8N543 542 aa21.31■■□□□ 1
SPNS3-204ENST00000575194 DHX36Q9H2U1 1008 aaKnown RBP21.31■■□□□ 1
SPNS3-204ENST00000575194 DACH1Q9UI36 760 aa21.31■■□□□ 1
SPNS3-204ENST00000575194 MTMR7Q9Y216 660 aa21.31■■□□□ 1
SPNS3-204ENST00000575194 A0A087WWV3 80 aa21.3■■□□□ 1
SPNS3-204ENST00000575194 CYTH3O43739 400 aa21.3■■□□□ 1
SPNS3-204ENST00000575194 MYO1BO43795 1136 aa21.3■■□□□ 1
SPNS3-204ENST00000575194 ZNF280AP59817 542 aaPredicted RBP21.3■■□□□ 1
SPNS3-204ENST00000575194 ARL6IP4Q66PJ3 421 aaKnown RBP21.3■■□□□ 1
SPNS3-204ENST00000575194 TRIML1Q8N9V2 468 aa21.3■■□□□ 1
SPNS3-204ENST00000575194 HDAC9Q9UKV0 1011 aa21.3■■□□□ 1
SPNS3-204ENST00000575194 PCDHAC2Q9Y5I4 1007 aa21.3■■□□□ 1
SPNS3-204ENST00000575194 ACTN4O43707 911 aaKnown RBP21.29■■□□□ 1
SPNS3-204ENST00000575194 NPM3O75607 178 aaKnown RBP21.29■■□□□ 1
SPNS3-204ENST00000575194 OFD1O75665 1012 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 TTLL1O95922 423 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 MDM2Q00987 491 aaPredicted RBP21.29■■□□□ 1
SPNS3-204ENST00000575194 PTGDRQ13258 359 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 SMARCE1Q969G3 411 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 CCDC17Q96LX7 622 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 TTC12Q9H892 705 aaPredicted RBP21.29■■□□□ 1
SPNS3-204ENST00000575194 SERTAD1Q9UHV2 236 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 BAZ2BQ9UIF8 2168 aaKnown RBP21.29■■□□□ 1
SPNS3-204ENST00000575194 SHTN1A0MZ66 631 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 DDNO94850 711 aaPredicted RBP21.29■■□□□ 1
SPNS3-204ENST00000575194 SMC2O95347 1197 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 AKR1B1P15121 316 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 CFAP100Q494V2 611 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 NT5DC1Q5TFE4 455 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 MTMR14Q8NCE2 650 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 C6orf50Q9HD87 102 aa21.29■■□□□ 1
SPNS3-204ENST00000575194 CNOT7Q9UIV1 285 aaKnown RBP21.29■■□□□ 1
SPNS3-204ENST00000575194 M0R2N6 131 aa21.28■■□□□ 1
SPNS3-204ENST00000575194 GOLGA8HP0CJ92 632 aa21.28■■□□□ 1
SPNS3-204ENST00000575194 VEGFAP15692 232 aaPredicted RBP21.28■■□□□ 1
SPNS3-204ENST00000575194 GNA11P29992 359 aa21.28■■□□□ 1
SPNS3-204ENST00000575194 NAPAP54920 295 aa21.28■■□□□ 1
SPNS3-204ENST00000575194 SLC35G1Q2M3R5 365 aa21.28■■□□□ 1
SPNS3-204ENST00000575194 KRT25Q7Z3Z0 450 aa21.28■■□□□ 1
SPNS3-204ENST00000575194 SYMPKQ92797 1274 aaKnown RBP21.28■■□□□ 1
SPNS3-204ENST00000575194 IDI2Q9BXS1 227 aa21.28■■□□□ 1
SPNS3-204ENST00000575194 ZMYND12Q9H0C1 365 aa21.28■■□□□ 1
SPNS3-204ENST00000575194 PCDHA5Q9Y5H7 936 aa21.28■■□□□ 1
SPNS3-204ENST00000575194 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
SPNS3-204ENST00000575194 PDHBP11177 359 aa21.27■■□□□ 1
SPNS3-204ENST00000575194 MCM7P33993 719 aa21.27■■□□□ 1
SPNS3-204ENST00000575194 SHMT1P34896 483 aa21.27■■□□□ 1
SPNS3-204ENST00000575194 NOM1Q5C9Z4 860 aaKnown RBP21.27■■□□□ 1
SPNS3-204ENST00000575194 USP17L2Q6R6M4 530 aa21.27■■□□□ 1
SPNS3-204ENST00000575194 ZBED3Q96IU2 234 aaPredicted RBP21.27■■□□□ 1
SPNS3-204ENST00000575194 PRMT6Q96LA8 375 aaPredicted RBP21.27■■□□□ 1
SPNS3-204ENST00000575194 PCDHA6Q9UN73 950 aa21.27■■□□□ 1
SPNS3-204ENST00000575194 PCDHA8Q9Y5H6 950 aa21.27■■□□□ 1
SPNS3-204ENST00000575194 VWA3AA6NCI4 1184 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 LAD1O00515 517 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 SLFN14P0C7P3 912 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 LONP1P36776 959 aaKnown RBP21.26■□□□□ 0.99
SPNS3-204ENST00000575194 TXLNAP40222 546 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 RBM5P52756 815 aaKnown RBP eCLIP21.26■□□□□ 0.99
SPNS3-204ENST00000575194 MYL5Q02045 173 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 MICALL2Q8IY33 904 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 ZNF830Q96NB3 372 aaPredicted RBP21.26■□□□□ 0.99
SPNS3-204ENST00000575194 RIOX1Q9H6W3 641 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 MYOZ2Q9NPC6 264 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 GPRC5DQ9NZD1 345 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 ESYT2A0FGR8 921 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 SPDYE2BA6NHP3 402 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 USP17L5A8MUK1 530 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 WNT7AO00755 349 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 NEMFO60524 1076 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 SPDYE6P0CI01 402 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 SNHG28P0DPA3 235 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 PTGS1P23219 599 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 DHX8Q14562 1220 aaKnown RBP21.26■□□□□ 0.99
SPNS3-204ENST00000575194 TYW1BQ6NUM6 668 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 DPY19L2Q6NUT2 758 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 MLKLQ8NB16 471 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 MYH4Q9Y623 1939 aa21.26■□□□□ 0.99
SPNS3-204ENST00000575194 SIPA1L1O43166 1804 aa21.25■□□□□ 0.99
SPNS3-204ENST00000575194 COL2A1P02458 1487 aaPredicted RBP21.25■□□□□ 0.99
SPNS3-204ENST00000575194 DLGAP5Q15398 846 aa21.25■□□□□ 0.99
SPNS3-204ENST00000575194 CCDC186Q7Z3E2 898 aa21.25■□□□□ 0.99
SPNS3-204ENST00000575194 PDILTQ8N807 584 aa21.25■□□□□ 0.99
SPNS3-204ENST00000575194 DHX58Q96C10 678 aa21.25■□□□□ 0.99
SPNS3-204ENST00000575194 TRIM34Q9BYJ4 488 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms