RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 JMYQ8N9B5 988 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 THAP3Q8WTV1 239 aaPredicted RBP6.39□□□□□ -1.39
TSR1-203ENST00000575049 CYB5D2Q8WUJ1 264 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 SCYL1Q96KG9 808 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 MAPK8IP1Q9UQF2 711 aa6.39□□□□□ -1.39
TSR1-203ENST00000575049 KRT18P05783 430 aaKnown RBP6.38□□□□□ -1.39
TSR1-203ENST00000575049 CEACAM5P06731 702 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 CNGA1P29973 690 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 EPHB1P54762 984 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 SAFB2Q14151 953 aaKnown RBP eCLIP6.38□□□□□ -1.39
TSR1-203ENST00000575049 DHX8Q14562 1220 aaKnown RBP6.38□□□□□ -1.39
TSR1-203ENST00000575049 TTF1Q15361 905 aaPredicted RBP6.38□□□□□ -1.39
TSR1-203ENST00000575049 SYCP2LQ5T4T6 812 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 PLD6Q8N2A8 252 aaKnown RBP6.38□□□□□ -1.39
TSR1-203ENST00000575049 SAMD3Q8N6K7 520 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 FAM169BQ8N8A8 192 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 DNAJB8Q8NHS0 232 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 NETO1Q8TDF5 533 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 MPHOSPH6Q99547 160 aaKnown RBP6.38□□□□□ -1.39
TSR1-203ENST00000575049 ARNT2Q9HBZ2 717 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 CHST12Q9NRB3 414 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 GMIPQ9P107 970 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 CNTNAP4Q9C0A0 1308 aa6.38□□□□□ -1.39
TSR1-203ENST00000575049 SLC22A31A6NKX4 558 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 GNAT3A8MTJ3 354 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 ASMTLO95671 621 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 ITIH2P19823 946 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 PPP2R5AQ15172 486 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 LRRC41Q15345 812 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 SFRP5Q5T4F7 317 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 OVOS1Q6IE37 1185 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 PPP1R13LQ8WUF5 828 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 PLCD4Q9BRC7 762 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 SFMBT1Q9UHJ3 866 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 CEP131Q9UPN4 1083 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 CD2APQ9Y5K6 639 aa6.37□□□□□ -1.39
TSR1-203ENST00000575049 ALG1L2C9J202 215 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 PRNPP04156 253 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 CYP7A1P22680 504 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 PMLP29590 882 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 ETV3P41162 512 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 VPS72Q15906 364 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 IFI16Q16666 785 aaKnown RBP6.36□□□□□ -1.39
TSR1-203ENST00000575049 C21orf62-AS1Q17RA5 79 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 CCDC81Q6ZN84 652 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 C22orf34Q6ZV56 151 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 THNSL2Q86YJ6 484 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 PHACTR4Q8IZ21 702 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 SYNPOQ8N3V7 929 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 CCDC74BQ96LY2 380 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 ZNRF3Q9ULT6 936 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 PLAAQ9Y263 795 aa6.36□□□□□ -1.39
TSR1-203ENST00000575049 WASHC2CQ9Y4E1 1318 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 PRR33A8MZF0 331 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 IFRD1O00458 451 aaPredicted RBP6.35□□□□□ -1.39
TSR1-203ENST00000575049 ADAMTS4O75173 837 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 MYL1P05976 194 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 ZNF865P0CJ78 1059 aaPredicted RBP6.35□□□□□ -1.39
TSR1-203ENST00000575049 RAG1P15918 1043 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 LRRFIP1Q32MZ4 808 aaKnown RBP6.35□□□□□ -1.39
TSR1-203ENST00000575049 TM4SF20Q53R12 229 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 VSIG10LQ86VR7 867 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 SPACA3Q8IXA5 215 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 BAHD1Q8TBE0 780 aaPredicted RBP6.35□□□□□ -1.39
TSR1-203ENST00000575049 CHAC2Q8WUX2 184 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 TMEM40Q8WWA1 233 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 COX4I2Q96KJ9 171 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 FERD3LQ96RJ6 166 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 KIF2CQ99661 725 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 ARPC5LQ9BPX5 153 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 TNKS2Q9H2K2 1166 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 ANTXR1Q9H6X2 564 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 ACTR10Q9NZ32 417 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 CCDC39Q9UFE4 941 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 PTCH2Q9Y6C5 1203 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 RPS6KL1Q9Y6S9 549 aa6.35□□□□□ -1.39
TSR1-203ENST00000575049 KDM2BQ8NHM5 1336 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 TMEM265A0A087WTH1 108 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 MEIS3P2A8K0S8 358 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 RBAK-RBAKDNI3L0D1 243 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 RGS13O14921 159 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 DIAPH1O60610 1272 aaKnown RBP6.34□□□□□ -1.39
TSR1-203ENST00000575049 CBX7O95931 251 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 IMPDH2P12268 514 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 PDE6BP35913 854 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 STAT3P40763 770 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 NKPD1Q17RQ9 610 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 MTERF2Q49AM1 385 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 CDCP2Q5VXM1 449 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 PPP4R4Q6NUP7 873 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 C14orf80Q86SX3 495 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 MFSD4AQ8N468 514 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 ATG4CQ96DT6 458 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 ZNF512BQ96KM6 892 aaPredicted RBP6.34□□□□□ -1.39
TSR1-203ENST00000575049 CNNM2Q9H8M5 875 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 PPT2Q9UMR5 302 aa6.34□□□□□ -1.39
TSR1-203ENST00000575049 ANGEL1Q9UNK9 670 aaKnown RBP6.34□□□□□ -1.39
TSR1-203ENST00000575049 SHTN1A0MZ66 631 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 FAM155AB1AL88 458 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms