RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 C2CD5Q86YS7 1000 aa26.89■■□□□ 1.9
NPLOC4-217ENST00000574897 TRIML1Q8N9V2 468 aa26.89■■□□□ 1.9
NPLOC4-217ENST00000574897 DAGLBQ8NCG7 672 aa26.89■■□□□ 1.9
NPLOC4-217ENST00000574897 MTRQ99707 1265 aa26.89■■□□□ 1.9
NPLOC4-217ENST00000574897 LZTS2Q9BRK4 669 aa26.89■■□□□ 1.9
NPLOC4-217ENST00000574897 MTMR4Q9NYA4 1195 aa26.89■■□□□ 1.9
NPLOC4-217ENST00000574897 CACNB3P54284 484 aa26.89■■□□□ 1.89
NPLOC4-217ENST00000574897 ZNF772Q68DY9 489 aaPredicted RBP26.89■■□□□ 1.89
NPLOC4-217ENST00000574897 ZFPM1Q8IX07 1006 aa26.89■■□□□ 1.89
NPLOC4-217ENST00000574897 TSC1Q92574 1164 aa26.89■■□□□ 1.89
NPLOC4-217ENST00000574897 PP2D1A8MPX8 630 aa26.88■■□□□ 1.89
NPLOC4-217ENST00000574897 PDHBP11177 359 aa26.88■■□□□ 1.89
NPLOC4-217ENST00000574897 MYRIPQ8NFW9 859 aa26.88■■□□□ 1.89
NPLOC4-217ENST00000574897 SAMSN1Q9NSI8 373 aaKnown RBP26.88■■□□□ 1.89
NPLOC4-217ENST00000574897 TPD52L1Q16890 204 aaPredicted RBP26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 KLHL10Q6JEL2 608 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 ZNF646O15015 1829 aaPredicted RBP26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 CHRNA5P30532 468 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 GOLGA8FQ08AF8 430 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 GOLGA8DPQ0D2H9 430 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 PDXDC2PQ6P474 469 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 KIAA0825Q8IV33 1275 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 FLAD1Q8NFF5 587 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 PRIMPOLQ96LW4 560 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 ZMYND12Q9H0C1 365 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 TRMT1Q9NXH9 659 aaKnown RBP26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 PLIN4Q96Q06 1357 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 SIPA1L1O43166 1804 aa26.87■■□□□ 1.89
NPLOC4-217ENST00000574897 STX17P56962 302 aa26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 TEKT1Q969V4 418 aa26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 RRP36Q96EU6 259 aaKnown RBP26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 TMX4Q9H1E5 349 aaPredicted RBP26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 SERPINB13Q9UIV8 391 aa26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 SMCO2A6NFE2 343 aa26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 ZNF18P17022 549 aa26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 SHMT1P34896 483 aa26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 RBM10P98175 930 aaKnown RBP26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 KARSQ15046 597 aaKnown RBP26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 ENOX1Q8TC92 643 aaKnown RBP26.86■■□□□ 1.89
NPLOC4-217ENST00000574897 CRKP46108 304 aa26.85■■□□□ 1.89
NPLOC4-217ENST00000574897 ARL6IP4Q66PJ3 421 aaKnown RBP26.85■■□□□ 1.89
NPLOC4-217ENST00000574897 DACH1Q9UI36 760 aa26.85■■□□□ 1.89
NPLOC4-217ENST00000574897 IGKV6D-41A0A0C4DH26 115 aa26.85■■□□□ 1.89
NPLOC4-217ENST00000574897 CUL4BQ13620 913 aa26.85■■□□□ 1.89
NPLOC4-217ENST00000574897 IQUBQ8NA54 791 aa26.85■■□□□ 1.89
NPLOC4-217ENST00000574897 FAM196BA6NMK8 535 aa26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 COBLO75128 1261 aa26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 TNNT1P13805 278 aa26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 HMGB2P26583 209 aaKnown RBP26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 GPCPD1Q9NPB8 672 aa26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 SFPQP23246 707 aaKnown RBP eCLIP26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 SHROOM1Q2M3G4 852 aaPredicted RBP26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 GALNT17Q6IS24 598 aa26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 HHIPL2Q6UWX4 724 aa26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 CCDC34Q96HJ3 373 aa26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 SEC63Q9UGP8 760 aaKnown RBP26.84■■□□□ 1.89
NPLOC4-217ENST00000574897 GREB1LQ9C091 1923 aaPredicted RBP26.83■■□□□ 1.89
NPLOC4-217ENST00000574897 CBFA2T2O43439 604 aa26.83■■□□□ 1.89
NPLOC4-217ENST00000574897 LONP1P36776 959 aaKnown RBP26.83■■□□□ 1.89
NPLOC4-217ENST00000574897 TCP10Q12799 353 aa26.83■■□□□ 1.89
NPLOC4-217ENST00000574897 VSTM4Q8IW00 320 aa26.83■■□□□ 1.89
NPLOC4-217ENST00000574897 CCDC150Q8NCX0 1101 aa26.83■■□□□ 1.89
NPLOC4-217ENST00000574897 RIOK3O14730 519 aaKnown RBP26.83■■□□□ 1.88
NPLOC4-217ENST00000574897 CDK11BP21127 795 aaKnown RBP26.83■■□□□ 1.88
NPLOC4-217ENST00000574897 COA7Q96BR5 231 aa26.83■■□□□ 1.88
NPLOC4-217ENST00000574897 GSDMAQ96QA5 445 aa26.83■■□□□ 1.88
NPLOC4-217ENST00000574897 PLIN2Q99541 437 aa26.83■■□□□ 1.88
NPLOC4-217ENST00000574897 RIOX1Q9H6W3 641 aa26.83■■□□□ 1.88
NPLOC4-217ENST00000574897 TMEM260Q9NX78 707 aa26.83■■□□□ 1.88
NPLOC4-217ENST00000574897 DTHD1Q6ZMT9 781 aa26.82■■□□□ 1.88
NPLOC4-217ENST00000574897 BIN2Q9UBW5 565 aaPredicted RBP26.82■■□□□ 1.88
NPLOC4-217ENST00000574897 MPHOSPH10O00566 681 aaKnown RBP26.82■■□□□ 1.88
NPLOC4-217ENST00000574897 LETM2Q2VYF4 491 aa26.82■■□□□ 1.88
NPLOC4-217ENST00000574897 JAKMIP3Q5VZ66 844 aa26.82■■□□□ 1.88
NPLOC4-217ENST00000574897 PPP1R3GB7ZBB8 358 aa26.81■■□□□ 1.88
NPLOC4-217ENST00000574897 H0YIN7 160 aa26.81■■□□□ 1.88
NPLOC4-217ENST00000574897 ATP2B2Q01814 1243 aa26.81■■□□□ 1.88
NPLOC4-217ENST00000574897 PODNQ7Z5L7 613 aa26.81■■□□□ 1.88
NPLOC4-217ENST00000574897 DNAJC18Q9H819 358 aa26.81■■□□□ 1.88
NPLOC4-217ENST00000574897 ECE2O60344 883 aa26.8■■□□□ 1.88
NPLOC4-217ENST00000574897 ERCC5P28715 1186 aaPredicted RBP26.8■■□□□ 1.88
NPLOC4-217ENST00000574897 TTBK2Q6IQ55 1244 aa26.8■■□□□ 1.88
NPLOC4-217ENST00000574897 CCAR2Q8N163 923 aaKnown RBP26.8■■□□□ 1.88
NPLOC4-217ENST00000574897 C6orf50Q9HD87 102 aa26.8■■□□□ 1.88
NPLOC4-217ENST00000574897 SYNRGQ9UMZ2 1314 aa26.8■■□□□ 1.88
NPLOC4-217ENST00000574897 NAALADL2Q58DX5 795 aa26.8■■□□□ 1.88
NPLOC4-217ENST00000574897 LRRC15Q8TF66 581 aa26.8■■□□□ 1.88
NPLOC4-217ENST00000574897 DYNC1I1O14576 645 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 CCNT1O60563 726 aaKnown RBP26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 TTLL1O95922 423 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 STAT6P42226 847 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 RBM5P52756 815 aaKnown RBP eCLIP26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 DACT2Q5SW24 774 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 SOGA3Q5TF21 947 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 E4F1Q66K89 784 aaPredicted RBP26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 MYO1BO43795 1136 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 SNHG28P0DPA3 235 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 RXRBP28702 533 aa26.79■■□□□ 1.88
NPLOC4-217ENST00000574897 NONOQ15233 471 aaKnown RBP eCLIP26.79■■□□□ 1.886e-7■■■■□ 20.2
NPLOC4-217ENST00000574897 CCDC12Q8WUD4 166 aaPredicted RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms