RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PRDM12Q9H4Q4 367 aa14.4□□□□□ -0.1
CTNS-208ENST00000574218 CTDP1Q9Y5B0 961 aaPredicted RBP14.4□□□□□ -0.1
CTNS-208ENST00000574218 MYH4Q9Y623 1939 aa14.4□□□□□ -0.1
CTNS-208ENST00000574218 ZNF532Q9HCE3 1301 aa14.4□□□□□ -0.1
CTNS-208ENST00000574218 C6orf222P0C671 652 aaPredicted RBP14.39□□□□□ -0.11
CTNS-208ENST00000574218 KCNA10Q16322 511 aa14.39□□□□□ -0.11
CTNS-208ENST00000574218 CLEC10AQ8IUN9 316 aa14.39□□□□□ -0.11
CTNS-208ENST00000574218 FAM122AQ96E09 287 aa14.39□□□□□ -0.11
CTNS-208ENST00000574218 ASB2Q96Q27 587 aa14.39□□□□□ -0.11
CTNS-208ENST00000574218 PBX4Q9BYU1 374 aa14.39□□□□□ -0.11
CTNS-208ENST00000574218 DCP1AQ9NPI6 582 aaPredicted RBP14.39□□□□□ -0.11
CTNS-208ENST00000574218 ELP1O95163 1332 aa14.39□□□□□ -0.11
CTNS-208ENST00000574218 SYNGAP1Q96PV0 1343 aa14.39□□□□□ -0.11
CTNS-208ENST00000574218 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
CTNS-208ENST00000574218 CYP2D6P10635 497 aa14.38□□□□□ -0.11
CTNS-208ENST00000574218 CCDC85BQ15834 202 aaPredicted RBP14.38□□□□□ -0.11
CTNS-208ENST00000574218 TMEM240Q5SV17 173 aa14.38□□□□□ -0.11
CTNS-208ENST00000574218 ITPRIPQ8IWB1 547 aa14.38□□□□□ -0.11
CTNS-208ENST00000574218 DYNLL2Q96FJ2 89 aa14.38□□□□□ -0.11
CTNS-208ENST00000574218 DNAJC2Q99543 621 aaKnown RBP14.38□□□□□ -0.11
CTNS-208ENST00000574218 FBXO28Q9NVF7 368 aa14.38□□□□□ -0.11
CTNS-208ENST00000574218 TBX21Q9UL17 535 aa14.38□□□□□ -0.11
CTNS-208ENST00000574218 PPP1R9AQ9ULJ8 1098 aa14.38□□□□□ -0.11
CTNS-208ENST00000574218 VWA5AO00534 786 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 DUSP11O75319 330 aaKnown RBP14.37□□□□□ -0.11
CTNS-208ENST00000574218 EEF2P13639 858 aaKnown RBP14.37□□□□□ -0.11
CTNS-208ENST00000574218 PBX2P40425 430 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 SLC4A3P48751 1232 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 EVX2Q03828 476 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 HSP90AB4PQ58FF6 505 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 LCORLQ8N3X6 602 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 KLHDC9Q8NEP7 349 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 TEX13BQ9BXU2 312 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 PPP1R12CQ9BZL4 782 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 KANSL2Q9H9L4 492 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 SLC28A3Q9HAS3 691 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 ATP8A2Q9NTI2 1148 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 ADAMTS5Q9UNA0 930 aa14.37□□□□□ -0.11
CTNS-208ENST00000574218 GRXCR1A8MXD5 290 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 GOLIM4O00461 696 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 ASGR1P07306 291 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 ACRP10323 421 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 CSF2RAP15509 400 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 PLA2G5P39877 138 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 CDK8P49336 464 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 FAM83BQ5T0W9 1011 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 SNRNP48Q6IEG0 339 aaKnown RBP14.36□□□□□ -0.11
CTNS-208ENST00000574218 ZNF365Q70YC5 407 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 ARMT1Q9H993 441 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 RAPGEFL1Q9UHV5 662 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 ZNF214Q9UL59 606 aaPredicted RBP14.36□□□□□ -0.11
CTNS-208ENST00000574218 EXOC6BQ9Y2D4 811 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 BDP1A6H8Y1 2624 aa14.36□□□□□ -0.11
CTNS-208ENST00000574218 ARVCFO00192 962 aa14.35□□□□□ -0.11
CTNS-208ENST00000574218 MBD4O95243 580 aa14.35□□□□□ -0.11
CTNS-208ENST00000574218 CST5P28325 142 aaPredicted RBP14.35□□□□□ -0.11
CTNS-208ENST00000574218 GNASQ5JWF2 1037 aa14.35□□□□□ -0.11
CTNS-208ENST00000574218 SIAH1Q8IUQ4 282 aa14.35□□□□□ -0.11
CTNS-208ENST00000574218 MICALL1Q8N3F8 863 aa14.35□□□□□ -0.11
CTNS-208ENST00000574218 SLF1Q9BQI6 1058 aa14.35□□□□□ -0.11
CTNS-208ENST00000574218 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.35□□□□□ -0.11
CTNS-208ENST00000574218 IL23AQ9NPF7 189 aa14.35□□□□□ -0.11
CTNS-208ENST00000574218 MUC3AQ02505 3323 aa14.35□□□□□ -0.11
CTNS-208ENST00000574218 ZBED4O75132 1171 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 FGBP02675 491 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 IFIT2P09913 472 aaKnown RBP14.34□□□□□ -0.11
CTNS-208ENST00000574218 ACVR2BQ13705 512 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 AAK1Q2M2I8 961 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 MAMDC4Q6UXC1 1216 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 ANKRD35Q8N283 1001 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 CLASRPQ8N2M8 674 aaKnown RBP14.34□□□□□ -0.11
CTNS-208ENST00000574218 BCL11AQ9H165 835 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 NKX2-4Q9H2Z4 354 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 ABHD16BQ9H3Z7 469 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 IL1RAPL2Q9NP60 686 aa14.34□□□□□ -0.11
CTNS-208ENST00000574218 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.34□□□□□ -0.11
CTNS-208ENST00000574218 MYADML2A6NDP7 307 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 SNAI1O95863 264 aaPredicted RBP14.33□□□□□ -0.12
CTNS-208ENST00000574218 CDK7P50613 346 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 SKIV2LQ15477 1246 aaKnown RBP14.33□□□□□ -0.12
CTNS-208ENST00000574218 CCDC144BQ3MJ40 725 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 C12orf60Q5U649 245 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 RASIP1Q5U651 963 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 C16orf86Q6ZW13 317 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 NOL8Q76FK4 1167 aaKnown RBP14.33□□□□□ -0.12
CTNS-208ENST00000574218 C16orf59Q7L2K0 433 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 ZNF467Q7Z7K2 595 aaPredicted RBP14.33□□□□□ -0.12
CTNS-208ENST00000574218 CPXCR1Q8N123 301 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 REPS2Q8NFH8 660 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.33□□□□□ -0.12
CTNS-208ENST00000574218 HERVK_113Q902F9 699 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 C1QTNF1Q9BXJ1 281 aa14.33□□□□□ -0.12
CTNS-208ENST00000574218 GREB1LQ9C091 1923 aaPredicted RBP14.33□□□□□ -0.12
CTNS-208ENST00000574218 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
CTNS-208ENST00000574218 USP17L12C9JPN9 530 aa14.32□□□□□ -0.12
CTNS-208ENST00000574218 USP17L21D6R901 530 aa14.32□□□□□ -0.12
CTNS-208ENST00000574218 PRKAB2O43741 272 aa14.32□□□□□ -0.12
CTNS-208ENST00000574218 CYP2C18P33260 490 aa14.32□□□□□ -0.12
CTNS-208ENST00000574218 GJA9P57773 515 aa14.32□□□□□ -0.12
CTNS-208ENST00000574218 ADGRE1Q14246 886 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms