RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 ISY1Q9ULR0 285 aaKnown RBP14.53□□□□□ -0.08
CCDC40-210ENST00000573903 PHF24Q9UPV7 400 aa14.53□□□□□ -0.08
CCDC40-210ENST00000573903 TTC41PQ6P2S7 1318 aa14.52□□□□□ -0.08
CCDC40-210ENST00000573903 PGK1P00558 417 aa14.52□□□□□ -0.09
CCDC40-210ENST00000573903 PDE4BQ07343 736 aa14.52□□□□□ -0.09
CCDC40-210ENST00000573903 FAM109BQ6ICB4 259 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-210ENST00000573903 CPXCR1Q8N123 301 aa14.52□□□□□ -0.09
CCDC40-210ENST00000573903 KIFC2Q96AC6 838 aa14.52□□□□□ -0.09
CCDC40-210ENST00000573903 EPB41L4AQ9HCS5 686 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-210ENST00000573903 PDLIM7Q9NR12 457 aa14.52□□□□□ -0.09
CCDC40-210ENST00000573903 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-210ENST00000573903 FEM1BQ9UK73 627 aa14.52□□□□□ -0.09
CCDC40-210ENST00000573903 SYNPO2Q9UMS6 1093 aa14.52□□□□□ -0.09
CCDC40-210ENST00000573903 SMCHD1A6NHR9 2005 aa14.52□□□□□ -0.09
CCDC40-210ENST00000573903 SYNGAP1Q96PV0 1343 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 PATL2C9JE40 543 aaKnown RBP14.51□□□□□ -0.09
CCDC40-210ENST00000573903 M0R2C6 588 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 PRDM1O75626 825 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 TTLL1O95922 423 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 TSPY3P0CV98 308 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 TSPY8P0CW00 308 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 BADQ92934 168 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 FSD1Q9BTV5 496 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 NAPBQ9H115 298 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 FBXO40Q9UH90 709 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 ZHX1Q9UKY1 873 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-210ENST00000573903 FAM184BQ9ULE4 1060 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 TACC3Q9Y6A5 838 aa14.51□□□□□ -0.09
CCDC40-210ENST00000573903 A0A1W2PQ45 241 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-210ENST00000573903 A0A1W2PQY0 241 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 ATP2A1O14983 1001 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 CLTBP09497 229 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 ZNF865P0CJ78 1059 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-210ENST00000573903 TAL1P17542 331 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-210ENST00000573903 TLE2Q04725 743 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 PPP4R3BQ5MIZ7 849 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 IFNL3Q8IZI9 196 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 LRRC47Q8N1G4 583 aaKnown RBP14.5□□□□□ -0.09
CCDC40-210ENST00000573903 ANKRD35Q8N283 1001 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 NUP133Q8WUM0 1156 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 CEP95Q96GE4 821 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 STARD7Q9NQZ5 370 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 MTMR4Q9NYA4 1195 aa14.5□□□□□ -0.09
CCDC40-210ENST00000573903 PLIN4Q96Q06 1357 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 DNAH12Q6ZR08 3092 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 IGKV6D-41A0A0C4DH26 115 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 MOXD2PA6NHM9 499 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 POTEB2H3BUK9 544 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 PQBP1O60828 265 aaKnown RBP14.49□□□□□ -0.09
CCDC40-210ENST00000573903 FDX1P10109 184 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 RAG1P15918 1043 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 OAZ1P54368 228 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 IKQ13123 557 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-210ENST00000573903 SHHQ15465 462 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 ZNF467Q7Z7K2 595 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-210ENST00000573903 GMCL1P1Q8NEA9 526 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 CHST13Q8NET6 341 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 MKL1Q969V6 931 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 FAM161BQ96MY7 647 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 TSEN34Q9BSV6 310 aaKnown RBP14.49□□□□□ -0.09
CCDC40-210ENST00000573903 SPC25Q9HBM1 224 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 SLC38A10Q9HBR0 1119 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 RAVER2Q9HCJ3 691 aaKnown RBP14.49□□□□□ -0.09
CCDC40-210ENST00000573903 RIPK3Q9Y572 518 aa14.49□□□□□ -0.09
CCDC40-210ENST00000573903 SYNRGQ9UMZ2 1314 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 TRIM43BA6NCK2 446 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 DCDC2CA8MYV0 355 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 ADAMTS4O75173 837 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 BMP3P12645 472 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 STAT2P52630 851 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 C9orf50Q5SZB4 431 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 SLFN13Q68D06 897 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 MAMDC4Q6UXC1 1216 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 SH3RF1Q7Z6J0 888 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 NEDD1Q8NHV4 660 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 TRIM43Q96BQ3 446 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-210ENST00000573903 LENG1Q96BZ8 264 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-210ENST00000573903 TMEM39AQ9NV64 488 aa14.48□□□□□ -0.09
CCDC40-210ENST00000573903 COL6A3P12111 3177 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 MROH7Q68CQ1 1323 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 DNAJC25-GNG10A0A024R161 153 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 DUSP11O75319 330 aaKnown RBP14.47□□□□□ -0.09
CCDC40-210ENST00000573903 ACLYP53396 1101 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 TFAP4Q01664 338 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 PPARAQ07869 468 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 ACVR2BQ13705 512 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.47□□□□□ -0.09
CCDC40-210ENST00000573903 FAM160B2Q86V87 743 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 PCSK9Q8NBP7 692 aaKnown RBP14.47□□□□□ -0.09
CCDC40-210ENST00000573903 CHURC1Q8WUH1 139 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 RNPC3Q96LT9 517 aaKnown RBP14.47□□□□□ -0.09
CCDC40-210ENST00000573903 GLT1D1Q96MS3 346 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 GUCD1Q96NT3 240 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 ABHD16BQ9H3Z7 469 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 HOMER2Q9NSB8 354 aa14.47□□□□□ -0.09
CCDC40-210ENST00000573903 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.47□□□□□ -0.09
CCDC40-210ENST00000573903 MCM3APO60318 1980 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 TSPY2A6NKD2 308 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 TMEM232C9JQI7 657 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 KIAA0355O15063 1070 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms