RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 NPLOC4Q8TAT6 608 aa32.69■■■□□ 2.82
SCARF1-207ENST00000573867 TTC14Q96N46 770 aa32.69■■■□□ 2.82
SCARF1-207ENST00000573867 SLC38A10Q9HBR0 1119 aa32.69■■■□□ 2.82
SCARF1-207ENST00000573867 ISY1Q9ULR0 285 aaKnown RBP32.69■■■□□ 2.82
SCARF1-207ENST00000573867 SHISA4Q96DD7 197 aa32.68■■■□□ 2.82
SCARF1-207ENST00000573867 RNF208Q9H0X6 261 aa32.68■■■□□ 2.82
SCARF1-207ENST00000573867 FLRT1Q9NZU1 646 aa32.68■■■□□ 2.82
SCARF1-207ENST00000573867 RIPK3Q9Y572 518 aa32.68■■■□□ 2.82
SCARF1-207ENST00000573867 RBM8AQ9Y5S9 174 aaKnown RBP32.68■■■□□ 2.82
SCARF1-207ENST00000573867 SLC25A27O95847 323 aa32.67■■■□□ 2.82
SCARF1-207ENST00000573867 HOXC6P09630 235 aa32.67■■■□□ 2.82
SCARF1-207ENST00000573867 ADORA2AP29274 412 aa32.67■■■□□ 2.82
SCARF1-207ENST00000573867 NT5C2P49902 561 aa32.67■■■□□ 2.82
SCARF1-207ENST00000573867 STAT2P52630 851 aa32.67■■■□□ 2.82
SCARF1-207ENST00000573867 STOX1Q6ZVD7 989 aa32.67■■■□□ 2.82
SCARF1-207ENST00000573867 CYB5R4Q7L1T6 521 aa32.67■■■□□ 2.82
SCARF1-207ENST00000573867 DCAF4Q8WV16 495 aa32.67■■■□□ 2.82
SCARF1-207ENST00000573867 KRT23Q9C075 422 aa32.67■■■□□ 2.82
SCARF1-207ENST00000573867 PLA2G6O60733 806 aa32.66■■■□□ 2.82
SCARF1-207ENST00000573867 COBLO75128 1261 aa32.66■■■□□ 2.82
SCARF1-207ENST00000573867 ZKSCAN1P17029 563 aaPredicted RBP32.66■■■□□ 2.82
SCARF1-207ENST00000573867 MAP3K21Q5TCX8 1036 aa32.66■■■□□ 2.82
SCARF1-207ENST00000573867 TTBK2Q6IQ55 1244 aa32.66■■■□□ 2.82
SCARF1-207ENST00000573867 TEX13BQ9BXU2 312 aa32.66■■■□□ 2.82
SCARF1-207ENST00000573867 CNNM2Q9H8M5 875 aa32.66■■■□□ 2.82
SCARF1-207ENST00000573867 RAVER2Q9HCJ3 691 aaKnown RBP32.66■■■□□ 2.82
SCARF1-207ENST00000573867 PPP4R2Q9NY27 417 aa32.66■■■□□ 2.82
SCARF1-207ENST00000573867 ATP2A1O14983 1001 aa32.65■■■□□ 2.82
SCARF1-207ENST00000573867 STRNO43815 780 aa32.65■■■□□ 2.82
SCARF1-207ENST00000573867 ZBED4O75132 1171 aa32.65■■■□□ 2.82
SCARF1-207ENST00000573867 GJB1P08034 283 aa32.65■■■□□ 2.82
SCARF1-207ENST00000573867 PDHBP11177 359 aa32.65■■■□□ 2.82
SCARF1-207ENST00000573867 CCDC96Q2M329 555 aa32.65■■■□□ 2.82
SCARF1-207ENST00000573867 SNRNP48Q6IEG0 339 aaKnown RBP32.65■■■□□ 2.82
SCARF1-207ENST00000573867 FAM160B2Q86V87 743 aa32.65■■■□□ 2.82
SCARF1-207ENST00000573867 DGKHQ86XP1 1220 aa32.65■■■□□ 2.82
SCARF1-207ENST00000573867 CPXCR1Q8N123 301 aa32.65■■■□□ 2.82
SCARF1-207ENST00000573867 ENAHQ8N8S7 591 aaPredicted RBP32.65■■■□□ 2.82
SCARF1-207ENST00000573867 ZSCAN10Q96SZ4 725 aaPredicted RBP32.65■■■□□ 2.82
SCARF1-207ENST00000573867 FRMPD2Q68DX3 1309 aaPredicted RBP32.64■■■□□ 2.82
SCARF1-207ENST00000573867 IQCA1Q86XH1 822 aa32.64■■■□□ 2.82
SCARF1-207ENST00000573867 CHURC1Q8WUH1 139 aa32.64■■■□□ 2.82
SCARF1-207ENST00000573867 ANKS1AQ92625 1134 aa32.64■■■□□ 2.82
SCARF1-207ENST00000573867 PAK6Q9NQU5 681 aaPredicted RBP32.64■■■□□ 2.82
SCARF1-207ENST00000573867 ZNF536O15090 1300 aa32.63■■■□□ 2.81
SCARF1-207ENST00000573867 TNKSO95271 1327 aa32.63■■■□□ 2.81
SCARF1-207ENST00000573867 IGHA2P01877 340 aa32.63■■■□□ 2.81
SCARF1-207ENST00000573867 SNHG28P0DPA3 235 aa32.63■■■□□ 2.81
SCARF1-207ENST00000573867 SNAP25P60880 206 aa32.63■■■□□ 2.81
SCARF1-207ENST00000573867 IKQ13123 557 aaPredicted RBP32.63■■■□□ 2.81
SCARF1-207ENST00000573867 ERICH6BQ5W0A0 696 aa32.63■■■□□ 2.81
SCARF1-207ENST00000573867 ABRAQ8N0Z2 381 aa32.63■■■□□ 2.81
SCARF1-207ENST00000573867 PRR12Q9ULL5 1215 aa32.63■■■□□ 2.81
SCARF1-207ENST00000573867 E7EWF7 191 aa32.62■■■□□ 2.81
SCARF1-207ENST00000573867 PRKAR2AP13861 404 aaKnown RBP32.62■■■□□ 2.81
SCARF1-207ENST00000573867 SLC16A2P36021 539 aa32.62■■■□□ 2.81
SCARF1-207ENST00000573867 GJA8P48165 433 aa32.62■■■□□ 2.81
SCARF1-207ENST00000573867 CACNB2Q08289 660 aaPredicted RBP32.62■■■□□ 2.81
SCARF1-207ENST00000573867 TRMT44Q8IYL2 757 aaKnown RBP32.62■■■□□ 2.81
SCARF1-207ENST00000573867 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.62■■■□□ 2.81
SCARF1-207ENST00000573867 GPCPD1Q9NPB8 672 aa32.62■■■□□ 2.81
SCARF1-207ENST00000573867 FCER1AP12319 257 aa32.61■■■□□ 2.81
SCARF1-207ENST00000573867 CDC45O75419 566 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 SLC4A3P48751 1232 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 ZNF543Q08ER8 600 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 SEC23AQ15436 765 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 BTNL9Q6UXG8 535 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 KIAA1211Q6ZU35 1233 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 DPP9Q86TI2 863 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 U2AF1L4Q8WU68 220 aaKnown RBP32.6■■■□□ 2.81
SCARF1-207ENST00000573867 DEFB118Q96PH6 123 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 MMP19Q99542 508 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 ANO2Q9NQ90 1003 aa32.6■■■□□ 2.81
SCARF1-207ENST00000573867 RPTORQ8N122 1335 aa32.59■■■□□ 2.81
SCARF1-207ENST00000573867 COPB2P35606 906 aa32.59■■■□□ 2.81
SCARF1-207ENST00000573867 OAZ1P54368 228 aa32.59■■■□□ 2.81
SCARF1-207ENST00000573867 CCDC178Q5BJE1 867 aa32.59■■■□□ 2.81
SCARF1-207ENST00000573867 PNMA1Q8ND90 353 aa32.59■■■□□ 2.81
SCARF1-207ENST00000573867 AGBL1Q96MI9 1066 aa32.59■■■□□ 2.81
SCARF1-207ENST00000573867 CTDP1Q9Y5B0 961 aaPredicted RBP32.59■■■□□ 2.81
SCARF1-207ENST00000573867 PGK2P07205 417 aa32.58■■■□□ 2.81
SCARF1-207ENST00000573867 FDX1P10109 184 aa32.58■■■□□ 2.81
SCARF1-207ENST00000573867 TAL1P17542 331 aaPredicted RBP32.58■■■□□ 2.81
SCARF1-207ENST00000573867 COL9A3Q14050 684 aaPredicted RBP32.58■■■□□ 2.81
SCARF1-207ENST00000573867 UBAC1Q9BSL1 405 aa32.58■■■□□ 2.81
SCARF1-207ENST00000573867 HMX1Q9NP08 348 aaPredicted RBP32.58■■■□□ 2.81
SCARF1-207ENST00000573867 SLC27A2O14975 620 aa32.57■■■□□ 2.8
SCARF1-207ENST00000573867 SGPL1O95470 568 aa32.57■■■□□ 2.8
SCARF1-207ENST00000573867 CYP2C19P33261 490 aa32.57■■■□□ 2.8
SCARF1-207ENST00000573867 NECTIN1Q15223 517 aa32.57■■■□□ 2.8
SCARF1-207ENST00000573867 SYDE2Q5VT97 1194 aa32.57■■■□□ 2.8
SCARF1-207ENST00000573867 KAT14Q9H8E8 782 aa32.57■■■□□ 2.8
SCARF1-207ENST00000573867 GOLGA8HP0CJ92 632 aa32.56■■■□□ 2.8
SCARF1-207ENST00000573867 CCND3P30281 292 aaPredicted RBP32.56■■■□□ 2.8
SCARF1-207ENST00000573867 ANTXR2P58335 489 aa32.56■■■□□ 2.8
SCARF1-207ENST00000573867 TRDNQ13061 729 aa32.56■■■□□ 2.8
SCARF1-207ENST00000573867 CCDC174Q6PII3 467 aa32.56■■■□□ 2.8
SCARF1-207ENST00000573867 RANBP17Q9H2T7 1088 aaKnown RBP32.56■■■□□ 2.8
SCARF1-207ENST00000573867 KCTD2Q14681 263 aa32.55■■■□□ 2.8
SCARF1-207ENST00000573867 ZNF792Q3KQV3 632 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms