RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 GUCY1B3Q02153 619 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 SPP2Q13103 211 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 RTN1Q16799 776 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 FAM173BQ6P4H8 233 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 AMOTL1Q8IY63 956 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 NUP133Q8WUM0 1156 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 PHKBQ93100 1093 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 AIFM3Q96NN9 605 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 ORC3Q9UBD5 711 aaPredicted RBP11.13□□□□□ -0.63
NDE1-208ENST00000573694 MORF4L1Q9UBU8 362 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 PTCH2Q9Y6C5 1203 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 BAZ2BQ9UIF8 2168 aaKnown RBP11.13□□□□□ -0.63
NDE1-208ENST00000573694 HTTP42858 3142 aa11.13□□□□□ -0.63
NDE1-208ENST00000573694 CEP290O15078 2479 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 H3BQV1 296 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 FIBPO43427 364 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 DHX16O60231 1041 aaKnown RBP11.12□□□□□ -0.63
NDE1-208ENST00000573694 PRPF40AO75400 957 aaKnown RBP11.12□□□□□ -0.63
NDE1-208ENST00000573694 XRCC5P13010 732 aaKnown RBP11.12□□□□□ -0.63
NDE1-208ENST00000573694 RASA1P20936 1047 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 PTMSP20962 102 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 CDK8P49336 464 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
NDE1-208ENST00000573694 NTRK3Q16288 839 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 IFIT1BQ5T764 474 aaKnown RBP11.12□□□□□ -0.63
NDE1-208ENST00000573694 GADL1Q6ZQY3 521 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 IQCA1Q86XH1 822 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 CHMP4CQ96CF2 233 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 C12orf42Q96LP6 360 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 CABP5Q9NP86 173 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 GJB4Q9NTQ9 266 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
NDE1-208ENST00000573694 SWAP70Q9UH65 585 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 CPA4Q9UI42 421 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 DOCK1Q14185 1865 aa11.12□□□□□ -0.63
NDE1-208ENST00000573694 MYPNQ86TC9 1320 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 TRIM75PA6NK02 468 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
NDE1-208ENST00000573694 GJA8P48165 433 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 TFAP4Q01664 338 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 RCSD1Q6JBY9 416 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 USP17L2Q6R6M4 530 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 LBX2Q6XYB7 198 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 SYNE3Q6ZMZ3 975 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 CMTR1Q8N1G2 835 aaKnown RBP11.11□□□□□ -0.63
NDE1-208ENST00000573694 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 KIAA1683Q9H0B3 1180 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
NDE1-208ENST00000573694 MKNK2Q9HBH9 465 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 IL17RBQ9NRM6 502 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
NDE1-208ENST00000573694 STK36Q9NRP7 1315 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 ATAD5Q96QE3 1844 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 TNPO2O14787 897 aaKnown RBP11.1□□□□□ -0.63
NDE1-208ENST00000573694 GADD45BO75293 160 aaPredicted RBP11.1□□□□□ -0.63
NDE1-208ENST00000573694 CDKL5O76039 1030 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 SLURP2P0DP57 97 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 MAPK4P31152 587 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 RCAN1P53805 252 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 CCNA1P78396 465 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 IRX3P78415 501 aaPredicted RBP11.1□□□□□ -0.63
NDE1-208ENST00000573694 GABPAQ06546 454 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 TMTC2Q8N394 836 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 ANKLE1Q8NAG6 615 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 TMEM87AQ8NBN3 555 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 GPT2Q8TD30 523 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 SOCS4Q8WXH5 440 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 C8orf76Q96K31 380 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 ALG1Q9BT22 464 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 SLC26A6Q9BXS9 759 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 ATP6V1DQ9Y5K8 247 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 PLIN4Q96Q06 1357 aa11.1□□□□□ -0.63
NDE1-208ENST00000573694 PTPRFP10586 1907 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 DDAH1O94760 285 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 PLEKHA8P1O95397 391 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 TSPY3P0CV98 308 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 TSPY8P0CW00 308 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 CYP2C8P10632 490 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 IFNAR1P17181 557 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 GUCY1A2P33402 732 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 SSRP1Q08945 709 aaKnown RBP11.09□□□□□ -0.63
NDE1-208ENST00000573694 TROAPQ12815 778 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 CERKLQ49MI3 558 aaPredicted RBP11.09□□□□□ -0.63
NDE1-208ENST00000573694 CPLX2Q6PUV4 134 aaKnown RBP11.09□□□□□ -0.63
NDE1-208ENST00000573694 RASGRP2Q7LDG7 609 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 FANCBQ8NB91 859 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 GPRC5AQ8NFJ5 357 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 HTATIP2Q9BUP3 242 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 ASCC2Q9H1I8 757 aaPredicted RBP11.09□□□□□ -0.63
NDE1-208ENST00000573694 SH2D4AQ9H788 454 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 HOXC10Q9NYD6 342 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
NDE1-208ENST00000573694 ZBTB21Q9ULJ3 1066 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 RABGAP1Q9Y3P9 1069 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 DDX49Q9Y6V7 483 aaKnown RBP11.09□□□□□ -0.63
NDE1-208ENST00000573694 PHIPQ8WWQ0 1821 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 CNTNAP5Q8WYK1 1306 aa11.09□□□□□ -0.63
NDE1-208ENST00000573694 POTEFA5A3E0 1075 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms