RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 SHROOM1Q2M3G4 852 aaPredicted RBP33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 TTC38Q5R3I4 469 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 RESP18Q5W5W9 173 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 SLFN13Q68D06 897 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 TMEM39BQ9GZU3 492 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 C6orf50Q9HD87 102 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 SHTN1A0MZ66 631 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 PFKFB1P16118 471 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 MICALL2Q8IY33 904 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 ANP32BQ92688 251 aaKnown RBP33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 PANK2Q9BZ23 570 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 FBXO2Q9UK22 296 aaPredicted RBP33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 SRPRBQ9Y5M8 271 aaKnown RBP33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 GJA3Q9Y6H8 435 aa33.33■■■□□ 2.93
CTDNEP1-208ENST00000573600 ESYT2A0FGR8 921 aa33.32■■■□□ 2.92
CTDNEP1-208ENST00000573600 RRP1BQ14684 758 aaKnown RBP33.32■■■□□ 2.92
CTDNEP1-208ENST00000573600 SHC4Q6S5L8 630 aa33.32■■■□□ 2.92
CTDNEP1-208ENST00000573600 CKAP2LQ8IYA6 745 aa33.32■■■□□ 2.92
CTDNEP1-208ENST00000573600 ZNF579Q8NAF0 562 aaKnown RBP33.32■■■□□ 2.92
CTDNEP1-208ENST00000573600 PGAP2Q9UHJ9 254 aa33.32■■■□□ 2.92
CTDNEP1-208ENST00000573600 CNOT7Q9UIV1 285 aaKnown RBP33.32■■■□□ 2.92
CTDNEP1-208ENST00000573600 DICER1Q9UPY3 1922 aaKnown RBP33.32■■■□□ 2.92
CTDNEP1-208ENST00000573600 SLC1A4P43007 532 aa33.31■■■□□ 2.92
CTDNEP1-208ENST00000573600 ADGRF4Q8IZF3 695 aa33.31■■■□□ 2.92
CTDNEP1-208ENST00000573600 JMJD4Q9H9V9 463 aa33.31■■■□□ 2.92
CTDNEP1-208ENST00000573600 HPSEQ9Y251 543 aa33.31■■■□□ 2.92
CTDNEP1-208ENST00000573600 PNMA6FA0A0J9YX94 578 aa33.31■■■□□ 2.92
CTDNEP1-208ENST00000573600 CCDC194A0A1B0GVG4 234 aa33.31■■■□□ 2.92
CTDNEP1-208ENST00000573600 MAP3K10Q02779 954 aa33.31■■■□□ 2.92
CTDNEP1-208ENST00000573600 PCDHA6Q9UN73 950 aa33.31■■■□□ 2.92
CTDNEP1-208ENST00000573600 PCDHA8Q9Y5H6 950 aa33.31■■■□□ 2.92
CTDNEP1-208ENST00000573600 SMCO2A6NFE2 343 aa33.3■■■□□ 2.92
CTDNEP1-208ENST00000573600 SASS6Q6UVJ0 657 aa33.3■■■□□ 2.92
CTDNEP1-208ENST00000573600 KCTD1Q719H9 257 aa33.3■■■□□ 2.92
CTDNEP1-208ENST00000573600 GMCL1Q96IK5 515 aa33.3■■■□□ 2.92
CTDNEP1-208ENST00000573600 TIGD1Q96MW7 591 aa33.3■■■□□ 2.92
CTDNEP1-208ENST00000573600 CLIC6Q96NY7 704 aa33.3■■■□□ 2.92
CTDNEP1-208ENST00000573600 ZNF202O95125 648 aa33.29■■■□□ 2.92
CTDNEP1-208ENST00000573600 JAG1P78504 1218 aa33.29■■■□□ 2.92
CTDNEP1-208ENST00000573600 NOM1Q5C9Z4 860 aaKnown RBP33.29■■■□□ 2.92
CTDNEP1-208ENST00000573600 PPP1R18Q6NYC8 613 aa33.29■■■□□ 2.92
CTDNEP1-208ENST00000573600 ARHGEF10LQ9HCE6 1279 aa33.29■■■□□ 2.92
CTDNEP1-208ENST00000573600 F5H6K3 240 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 SYKP43405 635 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 TYRO3Q06418 890 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 KLRC3Q07444 240 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 TTBK2Q6IQ55 1244 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 MTMR8Q96EF0 704 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 UVSSAQ2YD98 709 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 ARHGAP27Q6ZUM4 889 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 RNF214Q8ND24 703 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 FERMT2Q96AC1 680 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 SDF4Q9BRK5 362 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 FAM13BQ9NYF5 915 aa33.28■■■□□ 2.92
CTDNEP1-208ENST00000573600 ADAMTS3O15072 1205 aa33.27■■■□□ 2.92
CTDNEP1-208ENST00000573600 RAD21O60216 631 aa33.27■■■□□ 2.92
CTDNEP1-208ENST00000573600 LMNB1P20700 586 aa33.27■■■□□ 2.92
CTDNEP1-208ENST00000573600 RASA3Q14644 834 aa33.27■■■□□ 2.92
CTDNEP1-208ENST00000573600 KRT25Q7Z3Z0 450 aa33.27■■■□□ 2.92
CTDNEP1-208ENST00000573600 ZBTB21Q9ULJ3 1066 aa33.27■■■□□ 2.92
CTDNEP1-208ENST00000573600 ZNF541Q9H0D2 1346 aa33.26■■■□□ 2.92
CTDNEP1-208ENST00000573600 ZBTB5O15062 677 aa33.26■■■□□ 2.92
CTDNEP1-208ENST00000573600 ZNF174Q15697 407 aa33.26■■■□□ 2.92
CTDNEP1-208ENST00000573600 FHDC1Q9C0D6 1143 aaPredicted RBP33.26■■■□□ 2.92
CTDNEP1-208ENST00000573600 ATP2C1P98194 919 aaPredicted RBP33.25■■■□□ 2.91
CTDNEP1-208ENST00000573600 KIF4BQ2VIQ3 1234 aa33.25■■■□□ 2.91
CTDNEP1-208ENST00000573600 SAMD7Q7Z3H4 446 aa33.25■■■□□ 2.91
CTDNEP1-208ENST00000573600 RASGRP4Q8TDF6 673 aa33.25■■■□□ 2.91
CTDNEP1-208ENST00000573600 H7C1D1 291 aa33.24■■■□□ 2.91
CTDNEP1-208ENST00000573600 NDUFB10O96000 172 aa33.24■■■□□ 2.91
CTDNEP1-208ENST00000573600 EGFRP00533 1210 aa33.24■■■□□ 2.91
CTDNEP1-208ENST00000573600 SLC16A2P36021 539 aa33.24■■■□□ 2.91
CTDNEP1-208ENST00000573600 CAP2P40123 477 aa33.24■■■□□ 2.91
CTDNEP1-208ENST00000573600 CDAN1Q8IWY9 1227 aa33.24■■■□□ 2.91
CTDNEP1-208ENST00000573600 TBC1D10BQ4KMP7 808 aaPredicted RBP33.23■■■□□ 2.91
CTDNEP1-208ENST00000573600 MIGA2Q7L4E1 593 aa33.23■■■□□ 2.91
CTDNEP1-208ENST00000573600 KCNH3Q9ULD8 1083 aa33.23■■■□□ 2.91
CTDNEP1-208ENST00000573600 MRVI1Q9Y6F6 885 aa33.23■■■□□ 2.91
CTDNEP1-208ENST00000573600 USP17L10C9JJH3 530 aa33.22■■■□□ 2.91
CTDNEP1-208ENST00000573600 WNT7AO00755 349 aa33.22■■■□□ 2.91
CTDNEP1-208ENST00000573600 TMX2Q9Y320 296 aa33.22■■■□□ 2.91
CTDNEP1-208ENST00000573600 CAVIN2O95810 425 aa33.22■■■□□ 2.91
CTDNEP1-208ENST00000573600 BMP3P12645 472 aa33.22■■■□□ 2.91
CTDNEP1-208ENST00000573600 PTGDRQ13258 359 aa33.22■■■□□ 2.91
CTDNEP1-208ENST00000573600 COA7Q96BR5 231 aa33.22■■■□□ 2.91
CTDNEP1-208ENST00000573600 GOPCQ9HD26 462 aa33.22■■■□□ 2.91
CTDNEP1-208ENST00000573600 SBF1O95248 1867 aa33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 GOLGB1Q14789 3259 aaKnown RBP33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 A0A1W2PRG0 241 aa33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 ADCY7P51828 1080 aa33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 NONOQ15233 471 aaKnown RBP eCLIP33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 GPC2Q8N158 579 aa33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 REXO1Q8N1G1 1221 aaKnown RBP33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 TEPSINQ96N21 525 aa33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 SH2D4AQ9H788 454 aa33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 HACL1Q9UJ83 578 aa33.21■■■□□ 2.91
CTDNEP1-208ENST00000573600 GRIN1Q05586 938 aa33.2■■■□□ 2.91
CTDNEP1-208ENST00000573600 CCDC173Q0VFZ6 552 aa33.2■■■□□ 2.91
CTDNEP1-208ENST00000573600 ARL6IP4Q66PJ3 421 aaKnown RBP33.2■■■□□ 2.91
CTDNEP1-208ENST00000573600 CSRNP2Q9H175 543 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms