RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 CHMP4BP1P59074 171 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 GNGT1P63211 74 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 MECOMQ03112 1051 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 CBX3Q13185 183 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 TOB2Q14106 344 aaPredicted RBP11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 LARP1Q6PKG0 1096 aaKnown RBP11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 PEX5LQ8IYB4 626 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 TEKT4Q8WW24 435 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 CTNNBL1Q8WYA6 563 aaPredicted RBP11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 LRRC59Q96AG4 307 aaKnown RBP11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 NACC2Q96BF6 587 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 OPTNQ96CV9 577 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 SPATA32Q96LK8 384 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 NUP58Q9BVL2 599 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 UBE2OQ9C0C9 1292 aaKnown RBP11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 CLSTN2Q9H4D0 955 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 SAMM50Q9Y512 469 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 PARP4Q9UKK3 1724 aaKnown RBP11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 CCDC70Q6NSX1 233 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 PACS1Q6VY07 963 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 CCDC73Q6ZRK6 1079 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 SRGAP1Q7Z6B7 1085 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 ARHGEF25Q86VW2 580 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 EXOC1Q9NV70 894 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 NLRP2Q9NX02 1062 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 CROTQ9UKG9 612 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 TMEM94Q12767 1356 aa11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 CCDC166P0CW27 439 aa11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 RNF187Q5TA31 235 aaPredicted RBP11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 NCCRP1Q6ZVX7 275 aaPredicted RBP11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 CNKSR1Q969H4 720 aa11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 CCDC8Q9H0W5 538 aaPredicted RBP11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 VIMP08670 466 aaKnown RBP11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 NEK2P51955 445 aa11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 CCDC155Q8N6L0 562 aa11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 QPCTLQ9NXS2 382 aa11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 TLR7Q9NYK1 1049 aaKnown RBP11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 ASB3Q9Y575 518 aa11.68□□□□□ -0.54
CHRNB1-205ENST00000573209 MST1RQ04912 1400 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 LRRIQ3A6PVS8 624 aaPredicted RBP11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 STXBP3O00186 592 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 EVI5O60447 810 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 TAF5LO75529 589 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 TUBB2AQ13885 445 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 RC3H1Q5TC82 1133 aaKnown RBP11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 DYDC1Q8WWB3 177 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 ANKRD27Q96NW4 1050 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 TUBB2BQ9BVA1 445 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 MAK16Q9BXY0 300 aaKnown RBP11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 OXCT2Q9BYC2 517 aaPredicted RBP11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 BOLA2Q9H3K6 86 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 COPRSQ9NQ92 184 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 HELLSQ9NRZ9 838 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 NOP53Q9NZM5 478 aaKnown RBP11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 CIDEBQ9UHD4 219 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 PALM3A6NDB9 673 aaPredicted RBP11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 NEURL1BA8MQ27 555 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 IGKV5-2P06315 115 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 PDIA6Q15084 440 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 CATIPQ7Z7H3 387 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 FERMT3Q86UX7 667 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 ANKRD24Q8TF21 1146 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 PPP2R3CQ969Q6 453 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 STAMBPL1Q96FJ0 436 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 TCHPQ9BT92 498 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 ZCWPW1Q9H0M4 648 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 NOD2Q9HC29 1040 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 PCMTD2Q9NV79 361 aa11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 FBXO9Q9UK97 447 aaPredicted RBP11.67□□□□□ -0.54
CHRNB1-205ENST00000573209 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 DDX60Q8IY21 1712 aaKnown RBP11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 FANCGO15287 622 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 WDHD1O75717 1129 aaPredicted RBP11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 ATP6V1G2O95670 118 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 CSB-PGBD3P0DP91 1061 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 BCRP11274 1271 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 OXCT1P55809 520 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 MXRA7P84157 204 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 RCN1Q15293 331 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 NANOGNBQ7Z5D8 188 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 DDX54Q8TDD1 881 aaKnown RBP11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 ZNF570Q96NI8 536 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 PNKPQ96T60 521 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 SH3GL1Q99961 368 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 LLPHQ9BRT6 129 aaKnown RBP11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 OSBPL1AQ9BXW6 950 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 DNAJC25Q9H1X3 360 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 PREBQ9HCU5 417 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 C2CD2Q9Y426 696 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms