RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 SNRKQ9NRH2 765 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 YBX2Q9Y2T7 364 aaKnown RBP12.32□□□□□ -0.44
CHMP6-203ENST00000572525 FPGT-TNNI3KV9GXZ4 949 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 COL4A4P53420 1690 aaPredicted RBP12.32□□□□□ -0.44
CHMP6-203ENST00000572525 SCN5AQ14524 2016 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 ZAP70P43403 619 aa12.31□□□□□ -0.44
CHMP6-203ENST00000572525 GJA9P57773 515 aa12.31□□□□□ -0.44
CHMP6-203ENST00000572525 PPP2R2DQ66LE6 453 aa12.31□□□□□ -0.44
CHMP6-203ENST00000572525 SLC43A3Q8NBI5 491 aa12.31□□□□□ -0.44
CHMP6-203ENST00000572525 PIH1D3Q9NQM4 214 aaKnown RBP12.31□□□□□ -0.44
CHMP6-203ENST00000572525 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
CHMP6-203ENST00000572525 ZNF214Q9UL59 606 aaPredicted RBP12.31□□□□□ -0.44
CHMP6-203ENST00000572525 PTPRSQ13332 1948 aa12.31□□□□□ -0.44
CHMP6-203ENST00000572525 DNAJC25-GNG10A0A024R161 153 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
CHMP6-203ENST00000572525 TLL1O43897 1013 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 CABYRO75952 493 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 ASGR1P07306 291 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 STAT3P40763 770 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 KCNQ1P51787 676 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 TFF2Q03403 129 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 KIAA1755Q5JYT7 1200 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 RPUSD2Q8IZ73 545 aaKnown RBP12.3□□□□□ -0.44
CHMP6-203ENST00000572525 DBNDD2Q9BQY9 259 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 RIOK1Q9BRS2 568 aaKnown RBP12.3□□□□□ -0.44
CHMP6-203ENST00000572525 ABHD16BQ9H3Z7 469 aa12.3□□□□□ -0.44
CHMP6-203ENST00000572525 NOB1Q9ULX3 412 aaKnown RBP12.3□□□□□ -0.44
CHMP6-203ENST00000572525 TET1Q8NFU7 2136 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 VWA5AO00534 786 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 SNAI1O95863 264 aaPredicted RBP12.29□□□□□ -0.44
CHMP6-203ENST00000572525 GNAI2P04899 355 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 PGK2P07205 417 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 PFKMP08237 780 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 ACRP10323 421 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 MIGA1Q8NAN2 632 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 REPS2Q8NFH8 660 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 LENG1Q96BZ8 264 aaPredicted RBP12.29□□□□□ -0.44
CHMP6-203ENST00000572525 CCDC17Q96LX7 622 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 PPP1R12CQ9BZL4 782 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 KCNH6Q9H252 994 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 C11orf16Q9NQ32 467 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 PPP1R9AQ9ULJ8 1098 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 MTCH2Q9Y6C9 303 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 SLC4A7Q9Y6M7 1214 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 SIP14410 1827 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 SCN10AQ9Y5Y9 1956 aa12.29□□□□□ -0.44
CHMP6-203ENST00000572525 PNMA6EA0A0J9YXQ4 647 aa12.28□□□□□ -0.44
CHMP6-203ENST00000572525 PI4K2BG5E9Z4 385 aa12.28□□□□□ -0.44
CHMP6-203ENST00000572525 APBB1O00213 710 aa12.28□□□□□ -0.44
CHMP6-203ENST00000572525 IDH1O75874 414 aaKnown RBP12.28□□□□□ -0.44
CHMP6-203ENST00000572525 POLR3DP05423 398 aaPredicted RBP12.28□□□□□ -0.44
CHMP6-203ENST00000572525 C6orf222P0C671 652 aaPredicted RBP12.28□□□□□ -0.44
CHMP6-203ENST00000572525 ICA1Q05084 483 aa12.28□□□□□ -0.44
CHMP6-203ENST00000572525 SIAH1Q8IUQ4 282 aa12.28□□□□□ -0.44
CHMP6-203ENST00000572525 TRMT2AQ8IZ69 625 aaKnown RBP12.28□□□□□ -0.44
CHMP6-203ENST00000572525 CDCA7LQ96GN5 454 aa12.28□□□□□ -0.44
CHMP6-203ENST00000572525 HIPK3Q9H422 1215 aa12.28□□□□□ -0.44
CHMP6-203ENST00000572525 TRIP12Q14669 1992 aaPredicted RBP12.28□□□□□ -0.44
CHMP6-203ENST00000572525 MYADML2A6NDP7 307 aa12.27□□□□□ -0.45
CHMP6-203ENST00000572525 PRR33A8MZF0 331 aa12.27□□□□□ -0.45
CHMP6-203ENST00000572525 MPHOSPH10O00566 681 aaKnown RBP12.27□□□□□ -0.45
CHMP6-203ENST00000572525 ATP2A1O14983 1001 aa12.27□□□□□ -0.45
CHMP6-203ENST00000572525 CYP2C18P33260 490 aa12.27□□□□□ -0.45
CHMP6-203ENST00000572525 ACVR2BQ13705 512 aa12.27□□□□□ -0.45
CHMP6-203ENST00000572525 POLA2Q14181 598 aa12.27□□□□□ -0.45
CHMP6-203ENST00000572525 GNASQ5JWF2 1037 aa12.27□□□□□ -0.45
CHMP6-203ENST00000572525 TEX13BQ9BXU2 312 aa12.27□□□□□ -0.45
CHMP6-203ENST00000572525 CRNKL1Q9BZJ0 848 aaKnown RBP12.27□□□□□ -0.45
CHMP6-203ENST00000572525 DBNLQ9UJU6 430 aaKnown RBP12.27□□□□□ -0.45
CHMP6-203ENST00000572525 CTAGE5O15320 804 aa12.26□□□□□ -0.45
CHMP6-203ENST00000572525 ANP32CO43423 234 aa12.26□□□□□ -0.45
CHMP6-203ENST00000572525 SSH3Q8TE77 659 aa12.26□□□□□ -0.45
CHMP6-203ENST00000572525 HLA-CQ95604 372 aa12.26□□□□□ -0.45
CHMP6-203ENST00000572525 NOC4LQ9BVI4 516 aaKnown RBP12.26□□□□□ -0.45
CHMP6-203ENST00000572525 MCM9Q9NXL9 1143 aa12.26□□□□□ -0.45
CHMP6-203ENST00000572525 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
CHMP6-203ENST00000572525 LMCD1Q9NZU5 365 aa12.26□□□□□ -0.45
CHMP6-203ENST00000572525 ZHX1Q9UKY1 873 aaPredicted RBP12.26□□□□□ -0.45
CHMP6-203ENST00000572525 ADCY6O43306 1168 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 ATP2A2P16615 1042 aaKnown RBP12.25□□□□□ -0.45
CHMP6-203ENST00000572525 SKIV2LQ15477 1246 aaKnown RBP12.25□□□□□ -0.45
CHMP6-203ENST00000572525 CCDC144BQ3MJ40 725 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 TMEM67Q5HYA8 995 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 OTOP2Q7RTS6 562 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 SPICE1Q8N0Z3 855 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 MICALL1Q8N3F8 863 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 PHOSPHO2Q8TCD6 241 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 VTI1AQ96AJ9 217 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 DDX11Q96FC9 970 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 SLC9A7Q96T83 725 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 WNT8AQ9H1J5 351 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 DCP1AQ9NPI6 582 aaPredicted RBP12.25□□□□□ -0.45
CHMP6-203ENST00000572525 NOP58Q9Y2X3 529 aaKnown RBP12.25□□□□□ -0.45
CHMP6-203ENST00000572525 LCTP09848 1927 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 ZDBF2Q9HCK1 2354 aa12.25□□□□□ -0.45
CHMP6-203ENST00000572525 CFAP54Q96N23 3096 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 MAGEB6P1A0A0J9YX57 407 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 SMIM22K7EJ46 135 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 TTF1Q15361 905 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms