RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.68
HCFC1R1-203ENST00000572355 SLF1Q9BQI6 1058 aa19.27■□□□□ 0.68
HCFC1R1-203ENST00000572355 TEX13BQ9BXU2 312 aa19.27■□□□□ 0.68
HCFC1R1-203ENST00000572355 STARD7Q9NQZ5 370 aa19.27■□□□□ 0.68
HCFC1R1-203ENST00000572355 ZSCAN25Q6NSZ9 544 aa19.26■□□□□ 0.67
HCFC1R1-203ENST00000572355 DDX11Q96FC9 970 aa19.26■□□□□ 0.67
HCFC1R1-203ENST00000572355 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.26■□□□□ 0.67
HCFC1R1-203ENST00000572355 ZBTB40Q9NUA8 1239 aa19.26■□□□□ 0.67
HCFC1R1-203ENST00000572355 CDH23Q9H251 3354 aa19.25■□□□□ 0.67
HCFC1R1-203ENST00000572355 DCDC2CA8MYV0 355 aa19.25■□□□□ 0.67
HCFC1R1-203ENST00000572355 ACLYP53396 1101 aa19.25■□□□□ 0.67
HCFC1R1-203ENST00000572355 FAAP100Q0VG06 881 aa19.25■□□□□ 0.67
HCFC1R1-203ENST00000572355 NUP133Q8WUM0 1156 aa19.25■□□□□ 0.67
HCFC1R1-203ENST00000572355 FAM184BQ9ULE4 1060 aa19.25■□□□□ 0.67
HCFC1R1-203ENST00000572355 RIPK3Q9Y572 518 aa19.25■□□□□ 0.67
HCFC1R1-203ENST00000572355 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
HCFC1R1-203ENST00000572355 MCM3APO60318 1980 aa19.24■□□□□ 0.67
HCFC1R1-203ENST00000572355 TMEM265A0A087WTH1 108 aa19.24■□□□□ 0.67
HCFC1R1-203ENST00000572355 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
HCFC1R1-203ENST00000572355 RASA1P20936 1047 aa19.24■□□□□ 0.67
HCFC1R1-203ENST00000572355 CPXCR1Q8N123 301 aa19.24■□□□□ 0.67
HCFC1R1-203ENST00000572355 TSEN34Q9BSV6 310 aaKnown RBP19.24■□□□□ 0.67
HCFC1R1-203ENST00000572355 MKNK2Q9HBH9 465 aa19.24■□□□□ 0.67
HCFC1R1-203ENST00000572355 CTDP1Q9Y5B0 961 aaPredicted RBP19.24■□□□□ 0.67
HCFC1R1-203ENST00000572355 F5H6K3 240 aa19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 SMARCA5O60264 1052 aaPredicted RBP19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 SNAI1O95863 264 aaPredicted RBP19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 NDUFB10O96000 172 aa19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 DNAJB2P25686 324 aa19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 KLRC3Q07444 240 aa19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 KCNA10Q16322 511 aa19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 ANKRD33Q7Z3H0 272 aa19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 MSL3Q8N5Y2 521 aaKnown RBP19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
HCFC1R1-203ENST00000572355 PRUNE2Q8WUY3 3088 aa19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 MOXD2PA6NHM9 499 aa19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 MINDY4BA8MYZ0 360 aa19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 C6orf222P0C671 652 aaPredicted RBP19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 IRX5P78411 483 aaPredicted RBP19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 KLHDC9Q8NEP7 349 aa19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 KIFC2Q96AC6 838 aa19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 TOX2Q96NM4 488 aa19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 STRBPQ96SI9 672 aaKnown RBP19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 LRRCC1Q9C099 1032 aa19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 RAVER2Q9HCJ3 691 aaKnown RBP19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 NYAP2Q9P242 653 aa19.22■□□□□ 0.67
HCFC1R1-203ENST00000572355 DNAJC25-GNG10A0A024R161 153 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 GSG1L2A8MUP6 293 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 ADCY6O43306 1168 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 ZBED4O75132 1171 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 GRIN2CQ14957 1233 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 SBK1Q52WX2 424 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 MAMDC4Q6UXC1 1216 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 PRPF38AQ8NAV1 312 aaKnown RBP19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 GLT1D1Q96MS3 346 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 VCANP13611 3396 aa19.21■□□□□ 0.67
HCFC1R1-203ENST00000572355 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 DUSP11O75319 330 aaKnown RBP19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 TIMP1P01033 207 aa19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 ACVR2BQ13705 512 aa19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 CCSAPQ6IQ19 270 aaPredicted RBP19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 LRRC47Q8N1G4 583 aaKnown RBP19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 ANKRD35Q8N283 1001 aa19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 VTI1AQ96AJ9 217 aa19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.2■□□□□ 0.662e-8■■■□□ 17
HCFC1R1-203ENST00000572355 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 TBX21Q9UL17 535 aa19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 MROH7Q68CQ1 1323 aa19.2■□□□□ 0.66
HCFC1R1-203ENST00000572355 PRDM1O75626 825 aa19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 ASGR1P07306 291 aa19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 CST5P28325 142 aaPredicted RBP19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 TDO2P48775 406 aa19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 ZNF467Q7Z7K2 595 aaPredicted RBP19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 USP38Q8NB14 1042 aa19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 OSBP2Q969R2 916 aa19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 CHMP4BQ9H444 224 aaKnown RBP19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 SPC25Q9HBM1 224 aa19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 EPB41L4AQ9HCS5 686 aaPredicted RBP19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 HOMER2Q9NSB8 354 aa19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 ISY1Q9ULR0 285 aaKnown RBP19.19■□□□□ 0.66
HCFC1R1-203ENST00000572355 LRRC37A2A6NM11 1700 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 IGKV6D-41A0A0C4DH26 115 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 ATP2A1O14983 1001 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 CCDC144BQ3MJ40 725 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 TSHZ3Q63HK5 1081 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 MFSD5Q6N075 450 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 ARMCX2Q7L311 632 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 KBTBD3Q8NAB2 608 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 PCSK9Q8NBP7 692 aaKnown RBP19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 APPBP2Q92624 585 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 TIFAQ96CG3 184 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 CEP95Q96GE4 821 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 FGD4Q96M96 766 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 PPP1R12CQ9BZL4 782 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 ZNF576Q9H609 170 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 SLC38A10Q9HBR0 1119 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 ECHDC1Q9NTX5 307 aa19.18■□□□□ 0.66
HCFC1R1-203ENST00000572355 ELP1O95163 1332 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms