RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 FLRT1Q9NZU1 646 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 ZNF536O15090 1300 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 VWA5AO00534 786 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 FLOT1O75955 427 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 HOXC6P09630 235 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 TSPY3P0CV98 308 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 TSPY8P0CW00 308 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 GRK4P32298 578 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 COG2Q14746 738 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 KIF22Q14807 665 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 CCL14Q16627 93 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 SLC9C1Q4G0N8 1177 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 SHCBP1Q8NEM2 672 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 PXYLP1Q8TE99 480 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 GMCL1Q96IK5 515 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 FGD4Q96M96 766 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 SPATC1LQ9H0A9 340 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 PAK6Q9NQU5 681 aaPredicted RBP10.29□□□□□ -0.76
SMG6-210ENST00000572205 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
SMG6-210ENST00000572205 LTBP2Q14767 1821 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 ATP2A1O14983 1001 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 ADCY3O60266 1144 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 INHAP05111 366 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 PCP11498 1178 aaKnown RBP10.28□□□□□ -0.76
SMG6-210ENST00000572205 MAPK4P31152 587 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 MLLT3P42568 568 aaPredicted RBP10.28□□□□□ -0.76
SMG6-210ENST00000572205 ANTXR2P58335 489 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 CAMK2BQ13554 666 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 SEC23AQ15436 765 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 CYB5R4Q7L1T6 521 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 ZNF444Q8N0Y2 327 aaPredicted RBP10.28□□□□□ -0.76
SMG6-210ENST00000572205 SLAIN1Q8ND83 568 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 MAP4K1Q92918 833 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
SMG6-210ENST00000572205 TMEM47Q9BQJ4 181 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 ESYT1Q9BSJ8 1104 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 SLC38A10Q9HBR0 1119 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 ZNF287Q9HBT7 754 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 RIPK3Q9Y572 518 aa10.28□□□□□ -0.76
SMG6-210ENST00000572205 LAMA2P24043 3122 aaKnown RBP10.27□□□□□ -0.76
SMG6-210ENST00000572205 TSPY2A6NKD2 308 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 B4E1Z4 1266 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 RANBP6O60518 1105 aaKnown RBP10.27□□□□□ -0.77
SMG6-210ENST00000572205 PLA2G6O60733 806 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 XRCC5P13010 732 aaKnown RBP10.27□□□□□ -0.77
SMG6-210ENST00000572205 TAL1P17542 331 aaPredicted RBP10.27□□□□□ -0.77
SMG6-210ENST00000572205 ERCC3P19447 782 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 PTPREP23469 700 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 MFAP1P55081 439 aaKnown RBP10.27□□□□□ -0.77
SMG6-210ENST00000572205 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 SLC35G1Q2M3R5 365 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 PLEKHH3Q7Z736 793 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 RIOX2Q8IUF8 465 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 MB21D1Q8N884 522 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 ENAHQ8N8S7 591 aaPredicted RBP10.27□□□□□ -0.77
SMG6-210ENST00000572205 NPLOC4Q8TAT6 608 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 SOCS4Q8WXH5 440 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 ANKS1AQ92625 1134 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 KIF12Q96FN5 646 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 APBA2Q99767 749 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 SLF1Q9BQI6 1058 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 UNC93B1Q9H1C4 597 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 SENP2Q9HC62 589 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 ASTN1O14525 1302 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 SZT2Q5T011 3432 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.77
SMG6-210ENST00000572205 DNAJC25-GNG10A0A024R161 153 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 COBLO75128 1261 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 KDM4AO75164 1064 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 SLC3A2P08195 630 aaKnown RBP10.26□□□□□ -0.77
SMG6-210ENST00000572205 PDHBP11177 359 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 CCL5P13501 91 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 EN2P19622 333 aaPredicted RBP10.26□□□□□ -0.77
SMG6-210ENST00000572205 SLFN13Q68D06 897 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 BTNL9Q6UXG8 535 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 MB21D2Q8IYB1 491 aaPredicted RBP10.26□□□□□ -0.77
SMG6-210ENST00000572205 TRPV1Q8NER1 839 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 RAET1EQ8TD07 263 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 COA7Q96BR5 231 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 STX8Q9UNK0 236 aa10.26□□□□□ -0.77
SMG6-210ENST00000572205 BAZ2BQ9UIF8 2168 aaKnown RBP10.26□□□□□ -0.77
SMG6-210ENST00000572205 SLC15A5A6NIM6 579 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 ZNF213O14771 459 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 HMGCRP04035 888 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 BMP3P12645 472 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 HOXD10P28358 340 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 ADORA2AP29274 412 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 MAP2K5Q13163 448 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 ARHGEF6Q15052 776 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 NECTIN1Q15223 517 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 RRP12Q5JTH9 1297 aaKnown RBP10.25□□□□□ -0.77
SMG6-210ENST00000572205 TTBK2Q6IQ55 1244 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 MFSD6Q6ZSS7 791 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 KCTD1Q719H9 257 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 GPIHBP1Q8IV16 184 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 ZKSCAN3Q9BRR0 538 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 HOXC10Q9NYD6 342 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 ZSWIM5Q9P217 1185 aa10.25□□□□□ -0.77
SMG6-210ENST00000572205 RBM8AQ9Y5S9 174 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms