RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 NR2E3Q9Y5X4 410 aa35.93■■■■□ 3.34
CTDNEP1-206ENST00000571409 KCTD2Q14681 263 aa35.92■■■■□ 3.34
CTDNEP1-206ENST00000571409 SNRNP48Q6IEG0 339 aaKnown RBP35.92■■■■□ 3.34
CTDNEP1-206ENST00000571409 TRPV1Q8NER1 839 aa35.92■■■■□ 3.34
CTDNEP1-206ENST00000571409 C11orf49Q9H6J7 331 aa35.92■■■■□ 3.34
CTDNEP1-206ENST00000571409 DIAPH3Q9NSV4 1193 aa35.92■■■■□ 3.34
CTDNEP1-206ENST00000571409 ISY1Q9ULR0 285 aaKnown RBP35.92■■■■□ 3.34
CTDNEP1-206ENST00000571409 EVI5O60447 810 aa35.91■■■■□ 3.34
CTDNEP1-206ENST00000571409 ZBED4O75132 1171 aa35.91■■■■□ 3.34
CTDNEP1-206ENST00000571409 CYBAP13498 195 aa35.91■■■■□ 3.34
CTDNEP1-206ENST00000571409 CWC27Q6UX04 472 aaKnown RBP35.91■■■■□ 3.34
CTDNEP1-206ENST00000571409 MAML3Q96JK9 1138 aa35.91■■■■□ 3.34
CTDNEP1-206ENST00000571409 DDX20Q9UHI6 824 aaKnown RBP35.91■■■■□ 3.34
CTDNEP1-206ENST00000571409 ALPK3Q96L96 1907 aa35.91■■■■□ 3.34
CTDNEP1-206ENST00000571409 HAND2P61296 217 aa35.9■■■■□ 3.34
CTDNEP1-206ENST00000571409 RRP12Q5JTH9 1297 aaKnown RBP35.9■■■■□ 3.34
CTDNEP1-206ENST00000571409 CPXCR1Q8N123 301 aa35.9■■■■□ 3.34
CTDNEP1-206ENST00000571409 GMCL1Q96IK5 515 aa35.9■■■■□ 3.34
CTDNEP1-206ENST00000571409 TMEM232C9JQI7 657 aa35.89■■■■□ 3.34
CTDNEP1-206ENST00000571409 HIP1O00291 1037 aa35.89■■■■□ 3.34
CTDNEP1-206ENST00000571409 PGK2P07205 417 aa35.89■■■■□ 3.34
CTDNEP1-206ENST00000571409 PDE4AP27815 886 aa35.89■■■■□ 3.34
CTDNEP1-206ENST00000571409 SLC1A4P43007 532 aa35.89■■■■□ 3.34
CTDNEP1-206ENST00000571409 CHMP4CQ96CF2 233 aa35.89■■■■□ 3.34
CTDNEP1-206ENST00000571409 SLC38A10Q9HBR0 1119 aa35.89■■■■□ 3.34
CTDNEP1-206ENST00000571409 ATP2A1O14983 1001 aa35.88■■■■□ 3.33
CTDNEP1-206ENST00000571409 MSCO60682 206 aa35.88■■■■□ 3.33
CTDNEP1-206ENST00000571409 SLC4A3P48751 1232 aa35.88■■■■□ 3.33
CTDNEP1-206ENST00000571409 HABP4Q5JVS0 413 aaKnown RBP35.88■■■■□ 3.33
CTDNEP1-206ENST00000571409 COLQQ9Y215 455 aaPredicted RBP35.88■■■■□ 3.33
CTDNEP1-206ENST00000571409 RIPK3Q9Y572 518 aa35.88■■■■□ 3.33
CTDNEP1-206ENST00000571409 PLXNA1Q9UIW2 1896 aa35.88■■■■□ 3.33
CTDNEP1-206ENST00000571409 SLC34A2O95436 690 aa35.87■■■■□ 3.33
CTDNEP1-206ENST00000571409 MCCP23508 829 aa35.87■■■■□ 3.33
CTDNEP1-206ENST00000571409 STAT2P52630 851 aa35.87■■■■□ 3.33
CTDNEP1-206ENST00000571409 RAVER2Q9HCJ3 691 aaKnown RBP35.87■■■■□ 3.33
CTDNEP1-206ENST00000571409 NOVP48745 357 aa35.85■■■■□ 3.33
CTDNEP1-206ENST00000571409 IKQ13123 557 aaPredicted RBP35.85■■■■□ 3.33
CTDNEP1-206ENST00000571409 ZNF792Q3KQV3 632 aa35.85■■■■□ 3.33
CTDNEP1-206ENST00000571409 PFASO15067 1338 aa35.84■■■■□ 3.33
CTDNEP1-206ENST00000571409 PRAMEF19Q5SWL8 479 aa35.84■■■■□ 3.33
CTDNEP1-206ENST00000571409 AKNAD1Q5T1N1 836 aa35.84■■■■□ 3.33
CTDNEP1-206ENST00000571409 FAM160B2Q86V87 743 aa35.84■■■■□ 3.33
CTDNEP1-206ENST00000571409 CHURC1Q8WUH1 139 aa35.84■■■■□ 3.33
CTDNEP1-206ENST00000571409 STAG1Q8WVM7 1258 aa35.84■■■■□ 3.33
CTDNEP1-206ENST00000571409 DIS3Q9Y2L1 958 aaKnown RBP35.84■■■■□ 3.33
CTDNEP1-206ENST00000571409 FDX1P10109 184 aa35.83■■■■□ 3.33
CTDNEP1-206ENST00000571409 OAZ1P54368 228 aa35.83■■■■□ 3.33
CTDNEP1-206ENST00000571409 CHRDL2Q6WN34 429 aa35.83■■■■□ 3.33
CTDNEP1-206ENST00000571409 MFSD6Q6ZSS7 791 aa35.83■■■■□ 3.33
CTDNEP1-206ENST00000571409 KCTD1Q719H9 257 aa35.83■■■■□ 3.33
CTDNEP1-206ENST00000571409 TBC1D10CQ8IV04 446 aa35.83■■■■□ 3.33
CTDNEP1-206ENST00000571409 MTMR7Q9Y216 660 aa35.83■■■■□ 3.33
CTDNEP1-206ENST00000571409 PCP11498 1178 aaKnown RBP35.82■■■■□ 3.32
CTDNEP1-206ENST00000571409 COL6A1P12109 1028 aa35.82■■■■□ 3.32
CTDNEP1-206ENST00000571409 TTC22Q5TAA0 569 aa35.82■■■■□ 3.32
CTDNEP1-206ENST00000571409 RCSD1Q6JBY9 416 aa35.82■■■■□ 3.32
CTDNEP1-206ENST00000571409 RASGRP2Q7LDG7 609 aa35.82■■■■□ 3.32
CTDNEP1-206ENST00000571409 TCP11L1Q9NUJ3 509 aa35.82■■■■□ 3.32
CTDNEP1-206ENST00000571409 LAMA4Q16363 1823 aa35.81■■■■□ 3.32
CTDNEP1-206ENST00000571409 SEPT4O43236 478 aa35.81■■■■□ 3.32
CTDNEP1-206ENST00000571409 GSPT1P15170 499 aaKnown RBP35.81■■■■□ 3.32
CTDNEP1-206ENST00000571409 DDX11Q96FC9 970 aa35.81■■■■□ 3.32
CTDNEP1-206ENST00000571409 TINF2Q9BSI4 451 aa35.81■■■■□ 3.32
CTDNEP1-206ENST00000571409 ZNF213O14771 459 aa35.8■■■■□ 3.32
CTDNEP1-206ENST00000571409 PLA2G6O60733 806 aa35.8■■■■□ 3.32
CTDNEP1-206ENST00000571409 ANO1Q5XXA6 986 aa35.8■■■■□ 3.32
CTDNEP1-206ENST00000571409 C7orf61Q8IZ16 206 aa35.8■■■■□ 3.32
CTDNEP1-206ENST00000571409 RNF41Q9H4P4 317 aaPredicted RBP35.8■■■■□ 3.32
CTDNEP1-206ENST00000571409 CEP290O15078 2479 aa35.79■■■■□ 3.32
CTDNEP1-206ENST00000571409 TMEM47Q9BQJ4 181 aa35.79■■■■□ 3.32
CTDNEP1-206ENST00000571409 FBXO40Q9UH90 709 aa35.79■■■■□ 3.32
CTDNEP1-206ENST00000571409 TOP1P11387 765 aaKnown RBP35.78■■■■□ 3.32
CTDNEP1-206ENST00000571409 CCDC96Q2M329 555 aa35.78■■■■□ 3.32
CTDNEP1-206ENST00000571409 CHST13Q8NET6 341 aa35.78■■■■□ 3.32
CTDNEP1-206ENST00000571409 DCAF4Q8WV16 495 aa35.78■■■■□ 3.32
CTDNEP1-206ENST00000571409 DSCC1Q9BVC3 393 aa35.78■■■■□ 3.32
CTDNEP1-206ENST00000571409 NEDD4P46934 1319 aa35.78■■■■□ 3.32
CTDNEP1-206ENST00000571409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP35.77■■■■□ 3.321e-10■■■□□ 14.6
CTDNEP1-206ENST00000571409 HOMER2Q9NSB8 354 aa35.77■■■■□ 3.32
CTDNEP1-206ENST00000571409 NRBP1Q9UHY1 535 aa35.77■■■■□ 3.32
CTDNEP1-206ENST00000571409 DNAJC25-GNG10A0A024R161 153 aa35.76■■■■□ 3.32
CTDNEP1-206ENST00000571409 ANKRD35Q8N283 1001 aa35.76■■■■□ 3.32
CTDNEP1-206ENST00000571409 ESR2Q92731 530 aa35.76■■■■□ 3.32
CTDNEP1-206ENST00000571409 PRR12Q9ULL5 1215 aa35.76■■■■□ 3.32
CTDNEP1-206ENST00000571409 DNM1LO00429 736 aa35.75■■■■□ 3.31
CTDNEP1-206ENST00000571409 AGBL1Q96MI9 1066 aa35.75■■■■□ 3.31
CTDNEP1-206ENST00000571409 SENP6Q9GZR1 1112 aaPredicted RBP35.75■■■■□ 3.31
CTDNEP1-206ENST00000571409 ZNF536O15090 1300 aa35.75■■■■□ 3.31
CTDNEP1-206ENST00000571409 GJC2Q5T442 439 aaPredicted RBP35.74■■■■□ 3.31
CTDNEP1-206ENST00000571409 IL25Q9H293 177 aa35.74■■■■□ 3.31
CTDNEP1-206ENST00000571409 TAL1P17542 331 aaPredicted RBP35.73■■■■□ 3.31
CTDNEP1-206ENST00000571409 SNAP25P60880 206 aa35.73■■■■□ 3.31
CTDNEP1-206ENST00000571409 LRRC26Q2I0M4 334 aa35.73■■■■□ 3.31
CTDNEP1-206ENST00000571409 CCDC174Q6PII3 467 aa35.73■■■■□ 3.31
CTDNEP1-206ENST00000571409 MSL3Q8N5Y2 521 aaKnown RBP35.73■■■■□ 3.31
CTDNEP1-206ENST00000571409 ARRDC4Q8NCT1 418 aa35.73■■■■□ 3.31
CTDNEP1-206ENST00000571409 TTC14Q96N46 770 aa35.73■■■■□ 3.31
CTDNEP1-206ENST00000571409 RBM27Q9P2N5 1060 aaKnown RBP35.73■■■■□ 3.31
CTDNEP1-206ENST00000571409 ZMYND8Q9ULU4 1186 aaPredicted RBP35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms