RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 NOC4LQ9BVI4 516 aaKnown RBP8.7□□□□□ -1.02
CHD3-213ENST00000571249 TBC1D2Q9BYX2 928 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 KDM4CQ9H3R0 1056 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 AS3MTQ9HBK9 375 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 DACH1Q9UI36 760 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 TRIM35Q9UPQ4 493 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 ELP1O95163 1332 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 SYNRGQ9UMZ2 1314 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 A0A0U1RQG5 324 aaPredicted RBP8.69□□□□□ -1.02
CHD3-213ENST00000571249 CYSRT1A8MQ03 144 aa8.69□□□□□ -1.02
CHD3-213ENST00000571249 USP17L10C9JJH3 530 aa8.69□□□□□ -1.02
CHD3-213ENST00000571249 ASGR1P07306 291 aa8.69□□□□□ -1.02
CHD3-213ENST00000571249 ZNF865P0CJ78 1059 aaPredicted RBP8.69□□□□□ -1.02
CHD3-213ENST00000571249 LTBRP36941 435 aa8.69□□□□□ -1.02
CHD3-213ENST00000571249 COL9A3Q14050 684 aaPredicted RBP8.69□□□□□ -1.02
CHD3-213ENST00000571249 CCDC30Q5VVM6 783 aa8.69□□□□□ -1.02
CHD3-213ENST00000571249 ZNF467Q7Z7K2 595 aaPredicted RBP8.69□□□□□ -1.02
CHD3-213ENST00000571249 MOV10L1Q9BXT6 1211 aaKnown RBP8.69□□□□□ -1.02
CHD3-213ENST00000571249 TRPV6Q9H1D0 765 aa8.69□□□□□ -1.02
CHD3-213ENST00000571249 MYH16Q9H6N6 1097 aa8.69□□□□□ -1.02
CHD3-213ENST00000571249 FAM50BQ9Y247 325 aa8.69□□□□□ -1.02
CHD3-213ENST00000571249 HELZ2Q9BYK8 2649 aaKnown RBP8.69□□□□□ -1.02
CHD3-213ENST00000571249 SMG1Q96Q15 3661 aaKnown RBP8.69□□□□□ -1.02
CHD3-213ENST00000571249 BPTFQ12830 3046 aa8.69□□□□□ -1.02
CHD3-213ENST00000571249 KIF28PB7ZC32 967 aa8.68□□□□□ -1.02
CHD3-213ENST00000571249 C19orf81C9J6K1 198 aa8.68□□□□□ -1.02
CHD3-213ENST00000571249 STXBP3O00186 592 aa8.68□□□□□ -1.02
CHD3-213ENST00000571249 TLR3O15455 904 aaKnown RBP8.68□□□□□ -1.02
CHD3-213ENST00000571249 DLX2Q07687 328 aaPredicted RBP8.68□□□□□ -1.02
CHD3-213ENST00000571249 SIGLEC14Q08ET2 396 aa8.68□□□□□ -1.02
CHD3-213ENST00000571249 DIEXFQ68CQ4 756 aaKnown RBP8.68□□□□□ -1.02
CHD3-213ENST00000571249 PABPC5Q96DU9 382 aaKnown RBP8.68□□□□□ -1.02
CHD3-213ENST00000571249 AGBL1Q96MI9 1066 aa8.68□□□□□ -1.02
CHD3-213ENST00000571249 SLC9A7Q96T83 725 aa8.68□□□□□ -1.02
CHD3-213ENST00000571249 C1orf115Q9H7X2 142 aa8.68□□□□□ -1.02
CHD3-213ENST00000571249 FRYQ5TBA9 3013 aa8.68□□□□□ -1.02
CHD3-213ENST00000571249 MBTPS2O43462 519 aa8.67□□□□□ -1.02
CHD3-213ENST00000571249 ERCC3P19447 782 aa8.67□□□□□ -1.02
CHD3-213ENST00000571249 ZYXQ15942 572 aaKnown RBP8.67□□□□□ -1.02
CHD3-213ENST00000571249 RSPO4Q2I0M5 234 aaPredicted RBP8.67□□□□□ -1.02
CHD3-213ENST00000571249 TCEAL5Q5H9L2 206 aa8.67□□□□□ -1.02
CHD3-213ENST00000571249 CATSPERGQ6ZRH7 1159 aa8.67□□□□□ -1.02
CHD3-213ENST00000571249 CRACR2BQ8N4Y2 399 aaPredicted RBP8.67□□□□□ -1.02
CHD3-213ENST00000571249 TMEM105Q8N8V8 129 aa8.67□□□□□ -1.02
CHD3-213ENST00000571249 C8orf58Q8NAV2 365 aa8.67□□□□□ -1.02
CHD3-213ENST00000571249 WDR66Q8TBY9 1149 aa8.67□□□□□ -1.02
CHD3-213ENST00000571249 PHOSPHO2Q8TCD6 241 aa8.67□□□□□ -1.02
CHD3-213ENST00000571249 CLDND1Q9NY35 253 aa8.67□□□□□ -1.02
CHD3-213ENST00000571249 GRIN2DO15399 1336 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 MROH5Q6ZUA9 1318 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 USP17L20D6RJB6 530 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 ADCY6O43306 1168 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 STRNO43815 780 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 LDHBP07195 334 aaKnown RBP8.66□□□□□ -1.02
CHD3-213ENST00000571249 PGK2P07205 417 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 C6orf222P0C671 652 aaPredicted RBP8.66□□□□□ -1.02
CHD3-213ENST00000571249 ARP10275 920 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 AKR1A1P14550 325 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 ERVK-21P61565 698 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 USP17L24Q0WX57 530 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 PDAP1Q13442 181 aaKnown RBP8.66□□□□□ -1.02
CHD3-213ENST00000571249 NBPF20Q3BBV1 942 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 G2E3Q7L622 706 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 CCDC146Q8IYE0 955 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 KCNG4Q8TDN1 519 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 POP1Q99575 1024 aaKnown RBP8.66□□□□□ -1.02
CHD3-213ENST00000571249 ATAD5Q96QE3 1844 aa8.66□□□□□ -1.02
CHD3-213ENST00000571249 SPDYE16A6NNV3 312 aaPredicted RBP8.65□□□□□ -1.02
CHD3-213ENST00000571249 B4GALT4O60513 344 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 GDF11O95390 407 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 ZNF853P0CG23 659 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 COL19A1Q14993 1142 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 DCLK2Q8N568 766 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 SPDYE1Q8NFV5 336 aaPredicted RBP8.65□□□□□ -1.02
CHD3-213ENST00000571249 LINS1Q8NG48 757 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 TINF2Q9BSI4 451 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 C17orf80Q9BSJ5 609 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 CHMP4AQ9BY43 222 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 MFRPQ9BY79 579 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 IGSF5Q9NSI5 407 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 NRBP1Q9UHY1 535 aa8.65□□□□□ -1.02
CHD3-213ENST00000571249 SCN5AQ14524 2016 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 LINC01553A4QN01 128 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 CTAGE5O15320 804 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 BEX3Q00994 111 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 FLIIQ13045 1269 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 LRRC24Q50LG9 513 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 GNASQ5JWF2 1037 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 METTL24Q5JXM2 366 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 MCTP2Q6DN12 878 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 USP17L2Q6R6M4 530 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 RPAINQ86UA6 219 aa8.64□□□□□ -1.03
CHD3-213ENST00000571249 SLC43A3Q8NBI5 491 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms