RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 FPGT-TNNI3KV9GXZ4 949 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 SCN5AQ14524 2016 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 BRWD1Q9NSI6 2320 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 UMODL1Q5DID0 1318 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 BAZ2AQ9UIF9 1905 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 E9PSI1 815 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 IDH1O75874 414 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 CD4P01730 458 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 POLR3DP05423 398 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 C6orf222P0C671 652 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 CLEC10AQ8IUN9 316 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 PCSK9Q8NBP7 692 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 TMX2Q9Y320 296 aa12.71□□□□□ -0.37
CTDNEP1-202ENST00000570380 WDR46O15213 610 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 TLR3O15455 904 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 STAT3P40763 770 aa12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 MAMDC4Q6UXC1 1216 aa12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 MSL3Q8N5Y2 521 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 RIOK1Q9BRS2 568 aaKnown RBP12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 VCPKMTQ9H867 229 aa12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 ZHX1Q9UKY1 873 aaPredicted RBP12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 ZNF214Q9UL59 606 aaPredicted RBP12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 COG5Q9UP83 839 aa12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 PCDHA11Q9Y5I1 949 aa12.7□□□□□ -0.38
CTDNEP1-202ENST00000570380 VWA5AO00534 786 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 CTAGE5O15320 804 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 GJA9P57773 515 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 GNASQ5JWF2 1037 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 KRT40Q6A162 431 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 REPS2Q8NFH8 660 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 VWCEQ96DN2 955 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 HIPK3Q9H422 1215 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 CD320Q9NPF0 282 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 SLC4A7Q9Y6M7 1214 aa12.69□□□□□ -0.38
CTDNEP1-202ENST00000570380 DNAJC25-GNG10A0A024R161 153 aa12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 EPOPA6NHQ4 379 aa12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 PI4K2BG5E9Z4 385 aa12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 SMIM22K7EJ46 135 aa12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 GTPBP6O43824 516 aaPredicted RBP12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 CCL23P55773 120 aa12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 CCDC144BQ3MJ40 725 aa12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 ANTXR1Q9H6X2 564 aa12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 CERS4Q9HA82 394 aa12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 DBNLQ9UJU6 430 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-202ENST00000570380 COL4A4P53420 1690 aaPredicted RBP12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 WDFY4Q6ZS81 3184 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 PTPRSQ13332 1948 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 AKR1B1P15121 316 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 COPB2P35606 906 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 MRE11P49959 708 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 ICA1Q05084 483 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 ACVR2BQ13705 512 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 SLC43A3Q8NBI5 491 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 SNX27Q96L92 541 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 WNT8AQ9H1J5 351 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 MCM9Q9NXL9 1143 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 TLR7Q9NYK1 1049 aaKnown RBP12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 PPP1R9AQ9ULJ8 1098 aa12.67□□□□□ -0.38
CTDNEP1-202ENST00000570380 GNAI2P04899 355 aa12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 CA3P07451 260 aa12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 CYP2D6P10635 497 aa12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 ATP2A2P16615 1042 aaKnown RBP12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 BEX3Q00994 111 aa12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 RPUSD2Q8IZ73 545 aaKnown RBP12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 HLA-CQ95604 372 aa12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 DDX11Q96FC9 970 aa12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 SH2D4AQ9H788 454 aa12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 RIPK3Q9Y572 518 aa12.66□□□□□ -0.38
CTDNEP1-202ENST00000570380 GRIN2DO15399 1336 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 MAGEB6P1A0A0J9YX57 407 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 ZBBXA8MT70 800 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 NKX3-2P78367 333 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 CXCL17Q6UXB2 119 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 ZNF467Q7Z7K2 595 aaPredicted RBP12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 SDR42E1Q8WUS8 393 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 SCLYQ96I15 445 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 FGD4Q96M96 766 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 CCDC8Q9H0W5 538 aaPredicted RBP12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 TRPV6Q9H1D0 765 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 ABHD16BQ9H3Z7 469 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 TET1Q8NFU7 2136 aa12.65□□□□□ -0.38
CTDNEP1-202ENST00000570380 PRR33A8MZF0 331 aa12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 ARHGEF15O94989 841 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms