RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ACRP10323 421 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 CCNFP41002 786 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 PRELPP51888 382 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 TNP2Q05952 138 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 SPEM2Q0P670 501 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 OS9Q13438 667 aaPredicted RBP4.12□□□□□ -1.75
CNOT1-221ENST00000569924 HDAC1Q13547 482 aaPredicted RBP4.12□□□□□ -1.75
CNOT1-221ENST00000569924 SLC10A6Q3KNW5 377 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 AXDND1Q5T1B0 1012 aaPredicted RBP4.12□□□□□ -1.75
CNOT1-221ENST00000569924 FOXB2Q5VYV0 432 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 TOM1L2Q6ZVM7 507 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 HPS1Q92902 700 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 POP1Q99575 1024 aaKnown RBP4.12□□□□□ -1.75
CNOT1-221ENST00000569924 DHRS4Q9BTZ2 278 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 CARD10Q9BWT7 1032 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 UBA5Q9GZZ9 404 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 INTS7Q9NVH2 962 aaKnown RBP4.12□□□□□ -1.75
CNOT1-221ENST00000569924 TOR4AQ9NXH8 423 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 EVC2Q86UK5 1308 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 PIK3C2AO00443 1686 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 QRICH2Q9H0J4 1663 aa4.12□□□□□ -1.75
CNOT1-221ENST00000569924 TRPM1Q7Z4N2 1603 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 SHTN1A0MZ66 631 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 SLC22A31A6NKX4 558 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 GFRA2O00451 464 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 GDF9O60383 454 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 HTR3BO95264 441 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 MYL1P05976 194 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 MAPTP10636 758 aaKnown RBP4.11□□□□□ -1.75
CNOT1-221ENST00000569924 NME1P15531 152 aaKnown RBP4.11□□□□□ -1.75
CNOT1-221ENST00000569924 L1CAMP32004 1257 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 ATP11AP98196 1134 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 LRRC41Q15345 812 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 ZYXQ15942 572 aaKnown RBP4.11□□□□□ -1.75
CNOT1-221ENST00000569924 C6orf118Q5T5N4 469 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 KIAA1211LQ6NV74 962 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 DDX46Q7L014 1031 aaKnown RBP4.11□□□□□ -1.75
CNOT1-221ENST00000569924 APBB1IPQ7Z5R6 666 aaPredicted RBP4.11□□□□□ -1.75
CNOT1-221ENST00000569924 PDZD3Q86UT5 571 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 LRRTM3Q86VH5 581 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 ARHGEF25Q86VW2 580 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 MARCH10Q8NA82 808 aaPredicted RBP4.11□□□□□ -1.75
CNOT1-221ENST00000569924 KCNH5Q8NCM2 988 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 RIN3Q8TB24 985 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 BHMTQ93088 406 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 ATG4CQ96DT6 458 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 SLC39A13Q96H72 371 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 EXOC2Q96KP1 924 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 CLUHP3Q96NS8 147 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 GAS2L1Q99501 681 aaPredicted RBP4.11□□□□□ -1.75
CNOT1-221ENST00000569924 ASPSCR1Q9BZE9 553 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 ARNT2Q9HBZ2 717 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 CACNA2D2Q9NY47 1150 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 MARK1Q9P0L2 795 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 GMIPQ9P107 970 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 TTC21BQ7Z4L5 1316 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 TTC21AQ8NDW8 1320 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 AKAP12Q02952 1782 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 NFAT5O94916 1531 aa4.11□□□□□ -1.75
CNOT1-221ENST00000569924 DCDC2BA2VCK2 349 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 FIGNL2A6NMB9 653 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 ZBTB42B2RXF5 422 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 J3QW42 95 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 AGRPO00253 132 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 EXOC5O00471 708 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 TNFRSF10CO14798 259 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 SMNDC1O75940 238 aaKnown RBP eCLIP4.1□□□□□ -1.75
CNOT1-221ENST00000569924 SCGB1D2O95969 90 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 GHRHP01286 108 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 ARAFP10398 606 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 RAB27AP51159 221 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 NEK2P51955 445 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 GPLD1P80108 840 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 SLC7A5Q01650 507 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 MAP7Q14244 749 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 PCSK7Q16549 785 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 FAM209AQ5JX71 171 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 CDCP2Q5VXM1 449 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 MRPL14Q6P1L8 145 aaKnown RBP4.1□□□□□ -1.75
CNOT1-221ENST00000569924 ADAMTSL4Q6UY14 1074 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 MPRIPQ6WCQ1 1025 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 PTF1AQ7RTS3 328 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 VN1R5Q7Z5H4 357 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 NECAB2Q7Z6G3 386 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 SCUBE1Q8IWY4 988 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 CHPFQ8IZ52 775 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 AHI1Q8N157 1196 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 MYO1HQ8N1T3 1032 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 SAMD3Q8N6K7 520 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 DDX54Q8TDD1 881 aaKnown RBP4.1□□□□□ -1.75
CNOT1-221ENST00000569924 KLHL6Q8WZ60 621 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 DDX1Q92499 740 aaKnown RBP4.1□□□□□ -1.75
CNOT1-221ENST00000569924 IPO9Q96P70 1041 aaKnown RBP4.1□□□□□ -1.75
CNOT1-221ENST00000569924 SLC9A7Q96T83 725 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 SLC30A3Q99726 388 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 CDC6Q99741 560 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 TARS2Q9BW92 718 aaKnown RBP4.1□□□□□ -1.75
CNOT1-221ENST00000569924 MRPL4Q9BYD3 311 aaKnown RBP4.1□□□□□ -1.75
CNOT1-221ENST00000569924 CNNM2Q9H8M5 875 aa4.1□□□□□ -1.75
CNOT1-221ENST00000569924 STK32BQ9NY57 414 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms