RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	KIF28P	B7ZC32	967 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	FMNL1	O95466	1100 aa	Predicted RBP	13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	BTD	P43251	543 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	DPP8	Q6V1X1	898 aa	Predicted RBP	13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	HDX	Q7Z353	690 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	RNF217	Q8TC41	542 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	KCNG4	Q8TDN1	519 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	PPM1E	Q8WY54	764 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	KIFC2	Q96AC6	838 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	DHX58	Q96C10	678 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	EIF3C	Q99613	913 aa	Known RBP	13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	HSD3B7	Q9H2F3	369 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	UBE2Q2L	H0YL09	131 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	IRF6	O14896	467 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	GTF2I	P78347	998 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	KIF23	Q02241	960 aa	Predicted RBP	13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	SLC4A8	Q2Y0W8	1093 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	MCTP2	Q6DN12	878 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	IQCA1	Q86XH1	822 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	C2CD5	Q86YS7	1000 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	TMEM139	Q8IV31	216 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	LINC00301	Q8NCQ3	95 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	FAM163A	Q96GL9	167 aa	Predicted RBP	13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	CEP89	Q96ST8	783 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	STK32B	Q9NY57	414 aa		13.55	□□□□□ -0.24
SPG7-222	ENST00000569820	ZNF202	O95125	648 aa		13.54	□□□□□ -0.24
SPG7-222	ENST00000569820	MYL5	Q02045	173 aa		13.54	□□□□□ -0.24
SPG7-222	ENST00000569820	FANCB	Q8NB91	859 aa		13.54	□□□□□ -0.24
SPG7-222	ENST00000569820	TGFBRAP1	Q8WUH2	860 aa		13.54	□□□□□ -0.24
SPG7-222	ENST00000569820	BAG1	Q99933	345 aa	Predicted RBP	13.54	□□□□□ -0.24
SPG7-222	ENST00000569820	SLC26A6	Q9BXS9	759 aa		13.54	□□□□□ -0.24
SPG7-222	ENST00000569820	SCN9A	Q15858	1988 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	CALR	P27797	417 aa	Known RBP	13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	RHBDL3	P58872	404 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	CHMP4BP1	P59074	171 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	PDE4B	Q07343	736 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	SSRP1	Q08945	709 aa	Known RBP	13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	IFIT1B	Q5T764	474 aa	Known RBP	13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	KRT40	Q6A162	431 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	ISM2	Q6H9L7	571 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	STYK1	Q6J9G0	422 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	FOXR1	Q6PIV2	292 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	BRAP	Q7Z569	592 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	NUP133	Q8WUM0	1156 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	CCDC196	A0A1B0GTZ2	297 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	PPP1R12A	O14974	1030 aa	Predicted RBP	13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	NMT2	O60551	498 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	ERLIN1	O75477	346 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	FAM47A	Q5JRC9	791 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	CERS5	Q8N5B7	392 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	ZSWIM4	Q9H7M6	989 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	FAN1	Q9Y2M0	1017 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	CLIC4	Q9Y696	253 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	SNED1	Q8TER0	1413 aa		13.53	□□□□□ -0.24
SPG7-222	ENST00000569820	TMEM232	C9JQI7	657 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820		H0YIN7	160 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	POTEB2	H3BUK9	544 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	SPTLC2	O15270	562 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	YEATS4	O95619	227 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	GUCY1A2	P33402	732 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	TROAP	Q12815	778 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	SRGAP1	Q7Z6B7	1085 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	MAPKAPK5	Q8IW41	473 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	SLF2	Q8IX21	1173 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	CMTR1	Q8N1G2	835 aa	Known RBP	13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	MSL3	Q8N5Y2	521 aa	Known RBP	13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	DYNLL2	Q96FJ2	89 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	SGSM3	Q96HU1	749 aa		13.52	□□□□□ -0.24
SPG7-222	ENST00000569820	FLT1	P17948	1338 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	STX10	O60499	249 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	POLR3D	P05423	398 aa	Predicted RBP	13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	CHRNA5	P30532	468 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	MAP2K2	P36507	400 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	CORO7	P57737	925 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	DOK7	Q18PE1	504 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	MYSM1	Q5VVJ2	828 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	TOGARAM2	Q6ZUX3	1019 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	TEX11	Q8IYF3	940 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	SUGT1	Q9Y2Z0	365 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	DAGLA	Q9Y4D2	1042 aa		13.52	□□□□□ -0.25
SPG7-222	ENST00000569820	MYO1B	O43795	1136 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	DDAH1	O94760	285 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	PLCG2	P16885	1265 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	PLCD1	P51178	756 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	PPP2R5B	Q15173	497 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	PTPN21	Q16825	1174 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	HSP90B2P	Q58FF3	399 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	DNAJC21	Q5F1R6	531 aa	Known RBP	13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	RCSD1	Q6JBY9	416 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	CATIP	Q7Z7H3	387 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	TRIM22	Q8IYM9	498 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	ANKRD20A12P	Q8NF67	263 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	ANKZF1	Q9H8Y5	726 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	POLR3E	Q9NVU0	708 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	SH3BP1	Q9Y3L3	701 aa		13.51	□□□□□ -0.25

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