RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 PHF20L1A8MW92 1017 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 EYA2O00167 538 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 ENTPD3O75355 529 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 HMGCRP04035 888 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 FGFR2P21802 821 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 RPIAP49247 311 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 RAB15P59190 212 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 MAP3K10Q02779 954 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 VASH1Q7L8A9 365 aaPredicted RBP8.72□□□□□ -1.01
CNOT1-218ENST00000569732 RPAP2Q8IXW5 612 aaPredicted RBP8.72□□□□□ -1.01
CNOT1-218ENST00000569732 LPIN2Q92539 896 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 CLP1Q92989 425 aaKnown RBP8.72□□□□□ -1.01
CNOT1-218ENST00000569732 IDI2Q9BXS1 227 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 CHMP4BQ9H444 224 aaKnown RBP8.72□□□□□ -1.01
CNOT1-218ENST00000569732 C11orf49Q9H6J7 331 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 MTMR10Q9NXD2 777 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 AGTPBP1Q9UPW5 1226 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 NOP58Q9Y2X3 529 aaKnown RBP8.72□□□□□ -1.01
CNOT1-218ENST00000569732 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.72□□□□□ -1.01
CNOT1-218ENST00000569732 RPTORQ8N122 1335 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 SALL1Q9NSC2 1324 aa8.72□□□□□ -1.01
CNOT1-218ENST00000569732 DDX60LQ5H9U9 1706 aaKnown RBP8.71□□□□□ -1.01
CNOT1-218ENST00000569732 CEP290O15078 2479 aa8.71□□□□□ -1.01
CNOT1-218ENST00000569732 CTNND1O60716 968 aaKnown RBP8.71□□□□□ -1.02
CNOT1-218ENST00000569732 CIAO1O76071 339 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 CD2BP2O95400 341 aaKnown RBP8.71□□□□□ -1.02
CNOT1-218ENST00000569732 LDHBP07195 334 aaKnown RBP8.71□□□□□ -1.02
CNOT1-218ENST00000569732 SLC5A1P13866 664 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 MAGEA10P43363 369 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-218ENST00000569732 PABPC4Q13310 644 aaKnown RBP eCLIP8.71□□□□□ -1.02
CNOT1-218ENST00000569732 AAMPQ13685 434 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 SWI5Q1ZZU3 235 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 CCDC102BQ68D86 513 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 Q7L0L9 218 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 SIX5Q8N196 739 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 ANKRD13CQ8N6S4 541 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 DIS3LQ8TF46 1054 aaKnown RBP8.71□□□□□ -1.02
CNOT1-218ENST00000569732 USP40Q9NVE5 1235 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 ZMYND8Q9ULU4 1186 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-218ENST00000569732 KIAA1024Q9UPX6 916 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 MAP4K5Q9Y4K4 846 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 PCDHGA11Q9Y5H2 935 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 PTPRFP10586 1907 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 LOC285556D6RIA3 1793 aa8.71□□□□□ -1.02
CNOT1-218ENST00000569732 PHIPQ8WWQ0 1821 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 AK9Q5TCS8 1911 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 DKK1O94907 266 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 PRDX5P30044 214 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 GCLCP48506 637 aaPredicted RBP8.7□□□□□ -1.02
CNOT1-218ENST00000569732 MFAP1P55081 439 aaKnown RBP8.7□□□□□ -1.02
CNOT1-218ENST00000569732 SEC13P55735 322 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 PHLDB3Q6NSJ2 640 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 SPNS2Q8IVW8 549 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.7□□□□□ -1.02
CNOT1-218ENST00000569732 ZGPATQ8N5A5 531 aaKnown RBP8.7□□□□□ -1.02
CNOT1-218ENST00000569732 EHBP1Q8NDI1 1231 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
CNOT1-218ENST00000569732 UBE2OQ9C0C9 1292 aaKnown RBP8.7□□□□□ -1.02
CNOT1-218ENST00000569732 GNL3LQ9NVN8 582 aaKnown RBP8.7□□□□□ -1.02
CNOT1-218ENST00000569732 OGDHLQ9ULD0 1010 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 GNEQ9Y223 722 aaKnown RBP8.7□□□□□ -1.02
CNOT1-218ENST00000569732 RFX7Q2KHR2 1363 aa8.7□□□□□ -1.02
CNOT1-218ENST00000569732 TRIM75PA6NK02 468 aa8.69□□□□□ -1.02
CNOT1-218ENST00000569732 SYN1P17600 705 aa8.69□□□□□ -1.02
CNOT1-218ENST00000569732 RGS3P49796 1198 aa8.69□□□□□ -1.02
CNOT1-218ENST00000569732 HDAC1Q13547 482 aaPredicted RBP8.69□□□□□ -1.02
CNOT1-218ENST00000569732 ARID5BQ14865 1188 aa8.69□□□□□ -1.02
CNOT1-218ENST00000569732 FAM109BQ6ICB4 259 aaPredicted RBP8.69□□□□□ -1.02
CNOT1-218ENST00000569732 ZSCAN29Q8IWY8 852 aaPredicted RBP8.69□□□□□ -1.02
CNOT1-218ENST00000569732 ZFPM1Q8IX07 1006 aa8.69□□□□□ -1.02
CNOT1-218ENST00000569732 SIL1Q9H173 461 aa8.69□□□□□ -1.02
CNOT1-218ENST00000569732 DENND2AQ9ULE3 1009 aa8.69□□□□□ -1.02
CNOT1-218ENST00000569732 GAKO14976 1311 aa8.69□□□□□ -1.02
CNOT1-218ENST00000569732 ARID4AP29374 1257 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-218ENST00000569732 IL15P40933 162 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-218ENST00000569732 INTS6LQ5JSJ4 861 aaKnown RBP8.68□□□□□ -1.02
CNOT1-218ENST00000569732 TREML2Q5T2D2 321 aa8.68□□□□□ -1.02
CNOT1-218ENST00000569732 MAP3K21Q5TCX8 1036 aa8.68□□□□□ -1.02
CNOT1-218ENST00000569732 TPCN2Q8NHX9 752 aa8.68□□□□□ -1.02
CNOT1-218ENST00000569732 OSBPL5Q9H0X9 879 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-218ENST00000569732 DCTPP1Q9H773 170 aa8.68□□□□□ -1.02
CNOT1-218ENST00000569732 GJD2Q9UKL4 321 aa8.68□□□□□ -1.02
CNOT1-218ENST00000569732 EXOC6BQ9Y2D4 811 aa8.68□□□□□ -1.02
CNOT1-218ENST00000569732 COL2A1P02458 1487 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-218ENST00000569732 DDTLA6NHG4 134 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-218ENST00000569732 ERVH48-1M5A8F1 160 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 PFASO15067 1338 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 HMMRO75330 724 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 SURF6O75683 361 aaKnown RBP8.67□□□□□ -1.02
CNOT1-218ENST00000569732 IGHDP01880 384 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 XRCC5P13010 732 aaKnown RBP8.67□□□□□ -1.02
CNOT1-218ENST00000569732 TFCP2Q12800 502 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 ATP2B3Q16720 1220 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 PDS5AQ29RF7 1337 aaKnown RBP8.67□□□□□ -1.02
CNOT1-218ENST00000569732 ZNF280CQ8ND82 737 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 SOCS4Q8WXH5 440 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 TRIB2Q92519 343 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 CDK15Q96Q40 435 aa8.67□□□□□ -1.02
CNOT1-218ENST00000569732 SPTBN5Q9NRC6 3674 aaKnown RBP8.67□□□□□ -1.02
CNOT1-218ENST00000569732 MORF4L1Q9UBU8 362 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms