RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 LTBP2Q14767 1821 aa15.63■□□□□ 0.09
SPG7-221ENST00000569720 IGKV6D-41A0A0C4DH26 115 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 TSPY3P0CV98 308 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 TSPY8P0CW00 308 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 AKR1A1P14550 325 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 SLC4A3P48751 1232 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 MSL3Q8N5Y2 521 aaKnown RBP15.62■□□□□ 0.09
SPG7-221ENST00000569720 SLC17A8Q8NDX2 589 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 KIFC2Q96AC6 838 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 CEP95Q96GE4 821 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 PRDM5Q9NQX1 630 aaPredicted RBP15.62■□□□□ 0.09
SPG7-221ENST00000569720 MTMR4Q9NYA4 1195 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 FEM1BQ9UK73 627 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 PCDHB15Q9Y5E8 787 aa15.62■□□□□ 0.09
SPG7-221ENST00000569720 ATP2A1O14983 1001 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 MX1P20591 662 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 SNX17Q15036 470 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 PPP4R3BQ5MIZ7 849 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 C1orf53Q5VUE5 145 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 CPXCR1Q8N123 301 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 GMCL1P1Q8NEA9 526 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 PI4K2BQ8TCG2 481 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 FERMT2Q96AC1 680 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 FBXO40Q9UH90 709 aa15.61■□□□□ 0.09
SPG7-221ENST00000569720 ZNF865P0CJ78 1059 aaPredicted RBP15.6■□□□□ 0.09
SPG7-221ENST00000569720 FDX1P10109 184 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 BMP3P12645 472 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 AAMPQ13685 434 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 TRIM60Q495X7 471 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 ZMYM1Q5SVZ6 1142 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 Q7L0L9 218 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 LRRC47Q8N1G4 583 aaKnown RBP15.6■□□□□ 0.09
SPG7-221ENST00000569720 NEDD1Q8NHV4 660 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 SEC62Q99442 399 aaKnown RBP15.6■□□□□ 0.09
SPG7-221ENST00000569720 ISY1Q9ULR0 285 aaKnown RBP15.6■□□□□ 0.09
SPG7-221ENST00000569720 PHF24Q9UPV7 400 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 SYNGAP1Q96PV0 1343 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 PLIN4Q96Q06 1357 aa15.6■□□□□ 0.09
SPG7-221ENST00000569720 PGK1P00558 417 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 TAL1P17542 331 aaPredicted RBP15.59■□□□□ 0.09
SPG7-221ENST00000569720 OAZ1P54368 228 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 TFAP4Q01664 338 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 PPARAQ07869 468 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 SLFN13Q68D06 897 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 ANKRD35Q8N283 1001 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 CHST13Q8NET6 341 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 OTUD7AQ8TE49 926 aaPredicted RBP15.59■□□□□ 0.09
SPG7-221ENST00000569720 SLC38A10Q9HBR0 1119 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 RAVER2Q9HCJ3 691 aaKnown RBP15.59■□□□□ 0.09
SPG7-221ENST00000569720 FAM184BQ9ULE4 1060 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 RIPK3Q9Y572 518 aa15.59■□□□□ 0.09
SPG7-221ENST00000569720 MAMDC4Q6UXC1 1216 aa15.58■□□□□ 0.08
SPG7-221ENST00000569720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.58■□□□□ 0.08
SPG7-221ENST00000569720 ZNF467Q7Z7K2 595 aaPredicted RBP15.58■□□□□ 0.08
SPG7-221ENST00000569720 CHURC1Q8WUH1 139 aa15.58■□□□□ 0.08
SPG7-221ENST00000569720 TSEN34Q9BSV6 310 aaKnown RBP15.58■□□□□ 0.08
SPG7-221ENST00000569720 PDLIM7Q9NR12 457 aa15.58■□□□□ 0.08
SPG7-221ENST00000569720 MTMR10Q9NXD2 777 aa15.58■□□□□ 0.08
SPG7-221ENST00000569720 ZHX1Q9UKY1 873 aaPredicted RBP15.58■□□□□ 0.08
SPG7-221ENST00000569720 MCM3APO60318 1980 aa15.58■□□□□ 0.08
SPG7-221ENST00000569720 DNAJC25-GNG10A0A024R161 153 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 A0A1W2PQ45 241 aaPredicted RBP15.57■□□□□ 0.08
SPG7-221ENST00000569720 A0A1W2PQY0 241 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 TMEM232C9JQI7 657 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 STAT2P52630 851 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 RRP1P56182 461 aaKnown RBP15.57■□□□□ 0.08
SPG7-221ENST00000569720 TLE2Q04725 743 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 IKQ13123 557 aaPredicted RBP15.57■□□□□ 0.08
SPG7-221ENST00000569720 ANKRD45Q5TZF3 282 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 FAM160B2Q86V87 743 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 NUP133Q8WUM0 1156 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 BADQ92934 168 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 STXBP5LQ9Y2K9 1186 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 TACC3Q9Y6A5 838 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 COL6A3P12111 3177 aa15.57■□□□□ 0.08
SPG7-221ENST00000569720 TSPY2A6NKD2 308 aa15.56■□□□□ 0.08
SPG7-221ENST00000569720 ADAMTS4O75173 837 aa15.56■□□□□ 0.08
SPG7-221ENST00000569720 SNAI1O95863 264 aaPredicted RBP15.56■□□□□ 0.08
SPG7-221ENST00000569720 CLTBP09497 229 aa15.56■□□□□ 0.08
SPG7-221ENST00000569720 SLC1A4P43007 532 aa15.56■□□□□ 0.08
SPG7-221ENST00000569720 FAM109BQ6ICB4 259 aaPredicted RBP15.56■□□□□ 0.08
SPG7-221ENST00000569720 EVI5LQ96CN4 794 aa15.56■□□□□ 0.08
SPG7-221ENST00000569720 GMCL1Q96IK5 515 aa15.56■□□□□ 0.08
SPG7-221ENST00000569720 ABHD16BQ9H3Z7 469 aa15.56■□□□□ 0.08
SPG7-221ENST00000569720 SPC25Q9HBM1 224 aa15.56■□□□□ 0.08
SPG7-221ENST00000569720 STX8Q9UNK0 236 aa15.56■□□□□ 0.08
SPG7-221ENST00000569720 SUPT16HQ9Y5B9 1047 aaKnown RBP15.56■□□□□ 0.08
SPG7-221ENST00000569720 SYNRGQ9UMZ2 1314 aa15.55■□□□□ 0.08
SPG7-221ENST00000569720 TRIM43BA6NCK2 446 aa15.55■□□□□ 0.08
SPG7-221ENST00000569720 MOXD2PA6NHM9 499 aa15.55■□□□□ 0.08
SPG7-221ENST00000569720 DUSP11O75319 330 aaKnown RBP15.55■□□□□ 0.08
SPG7-221ENST00000569720 ACVR2BQ13705 512 aa15.55■□□□□ 0.08
SPG7-221ENST00000569720 ERICH6BQ5W0A0 696 aa15.55■□□□□ 0.08
SPG7-221ENST00000569720 STAG1Q8WVM7 1258 aa15.55■□□□□ 0.08
SPG7-221ENST00000569720 TRIM43Q96BQ3 446 aaPredicted RBP15.55■□□□□ 0.08
SPG7-221ENST00000569720 LENG1Q96BZ8 264 aaPredicted RBP15.55■□□□□ 0.08
SPG7-221ENST00000569720 ACAD9Q9H845 621 aa15.55■□□□□ 0.08
SPG7-221ENST00000569720 STARD7Q9NQZ5 370 aa15.55■□□□□ 0.08
SPG7-221ENST00000569720 HOMER2Q9NSB8 354 aa15.55■□□□□ 0.08
SPG7-221ENST00000569720 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms