RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	FOXP4	Q8IVH2	680 aa	Predicted RBP	7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	PCSK9	Q8NBP7	692 aa	Known RBP	7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	ATOH1	Q92858	354 aa	Predicted RBP	7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	PBXIP1	Q96AQ6	731 aa		7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	AGBL1	Q96MI9	1066 aa		7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	KIAA1683	Q9H0B3	1180 aa		7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	DHX36	Q9H2U1	1008 aa	Known RBP	7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	MROH8	Q9H579	483 aa		7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	GNL3L	Q9NVN8	582 aa	Known RBP	7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	C9orf78	Q9NZ63	289 aa	Predicted RBP	7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	DIS3	Q9Y2L1	958 aa	Known RBP	7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	AK9	Q5TCS8	1911 aa		7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	TRANK1	O15050	2925 aa		7.75	□□□□□ -1.17
BBS4-218	ENST00000569440	PRRC2B	Q5JSZ5	2229 aa	Known RBP	7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	PRR23A	A6NEV1	266 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	DUSP11	O75319	330 aa	Known RBP	7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	PFKM	P08237	780 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	USP14	P54578	494 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	MECOM	Q03112	1051 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	TWISTNB	Q3B726	338 aa	Predicted RBP	7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	ZNF792	Q3KQV3	632 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	HERC6	Q8IVU3	1022 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	ANKRD44	Q8N8A2	993 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	KLHDC4	Q8TBB5	520 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	COL26A1	Q96A83	441 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	CNTNAP3B	Q96NU0	1288 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	SLC9A7	Q96T83	725 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	CNTNAP3	Q9BZ76	1288 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	SUGCT	Q9HAC7	445 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	HOXC10	Q9NYD6	342 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	MUTYH	Q9UIF7	546 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	FAM184B	Q9ULE4	1060 aa		7.74	□□□□□ -1.17
BBS4-218	ENST00000569440	TMEM221	A6NGB7	291 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	KIF28P	B7ZC32	967 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440		M0R296	226 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	CTAGE5	O15320	804 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	ALDH1L1	O75891	902 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	NBPF7	P0C2Y1	421 aa	Predicted RBP	7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	FCER1A	P12319	257 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	PHKA1	P46020	1223 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	GJA9	P57773	515 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	NKX3-2	P78367	333 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	COG2	Q14746	738 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	COL19A1	Q14993	1142 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	ZYX	Q15942	572 aa	Known RBP	7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	SPTY2D1	Q68D10	685 aa	Predicted RBP	7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	TRIM67	Q6ZTA4	783 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	RNF135	Q8IUD6	432 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	SUGP1	Q8IWZ8	645 aa	Known RBP	7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	FBXL6	Q8N531	539 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	GDPD5	Q8WTR4	605 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	VTI1A	Q96AJ9	217 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	CDCA7L	Q96GN5	454 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	UPF3A	Q9H1J1	476 aa	Known RBP	7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	BICC1	Q9H694	974 aa	Known RBP	7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	RPAP3	Q9H6T3	665 aa	Predicted RBP	7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	ADAMTS8	Q9UP79	889 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	ZNF318	Q5VUA4	2279 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	PDS5A	Q29RF7	1337 aa	Known RBP	7.73	□□□□□ -1.17
BBS4-218	ENST00000569440	MYO15A	Q9UKN7	3530 aa		7.73	□□□□□ -1.17
BBS4-218	ENST00000569440		A0A0G2JMZ2	1700 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	SOWAHB	A6NEL2	793 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440		H3BQ06	376 aa	Predicted RBP	7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	EYA2	O00167	538 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	SNAI1	O95863	264 aa	Predicted RBP	7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	GH2	P01242	217 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	PGK2	P07205	417 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	ATG9A	Q7Z3C6	839 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	MB21D1	Q8N884	522 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	ACER1	Q8TDN7	264 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	TSR2	Q969E8	191 aa	Known RBP	7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	SCLY	Q96I15	445 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	FSD1	Q9BTV5	496 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	TRPV6	Q9H1D0	765 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	ABCF2	Q9UG63	623 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	FAM50B	Q9Y247	325 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	CNPY2	Q9Y2B0	182 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	DOCK2	Q92608	1830 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	GRIN2D	O15399	1336 aa		7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.72	□□□□□ -1.17
BBS4-218	ENST00000569440	LCHN	A4D1U4	455 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440		H0Y858	1186 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	TULP1	O00294	542 aa	Predicted RBP	7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	ADCY6	O43306	1168 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	B4GALT4	O60513	344 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	C6orf222	P0C671	652 aa	Predicted RBP	7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	AVPR2	P30518	371 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	NBL1	P41271	181 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	RFX5	P48382	616 aa	Predicted RBP	7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	VCP	P55072	806 aa	Known RBP	7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	ERVK-21	P61565	698 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	RASGRF1	Q13972	1273 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	GNAS	Q5JWF2	1037 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	CCDC102B	Q68D86	513 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	TATDN1	Q6P1N9	297 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	NCAPG2	Q86XI2	1143 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	TEX11	Q8IYF3	940 aa		7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	MSL3	Q8N5Y2	521 aa	Known RBP	7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	NSUN4	Q96CB9	384 aa	Known RBP	7.71	□□□□□ -1.18
BBS4-218	ENST00000569440	FEZ1	Q99689	392 aa		7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms