RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 TACC3Q9Y6A5 838 aa11.55□□□□□ -0.56
CLN6-209ENST00000569336 B4E1Z4 1266 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 PEX10O60683 326 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 PLA2G6O60733 806 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 ZBED4O75132 1171 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 ELNP15502 786 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 ZKSCAN1P17029 563 aaPredicted RBP11.54□□□□□ -0.56
CLN6-209ENST00000569336 OAZ1P54368 228 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 MAP2K5Q13163 448 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 GRB14Q14449 540 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 SART3Q15020 963 aaKnown RBP11.54□□□□□ -0.56
CLN6-209ENST00000569336 CCDC96Q2M329 555 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 Q3C1V9 767 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 RCSD1Q6JBY9 416 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 NCAPG2Q86XI2 1143 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 DGKHQ86XP1 1220 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 ABRAQ8N0Z2 381 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 SLC17A8Q8NDX2 589 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 MAP4K1Q92918 833 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 ANO2Q9NQ90 1003 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 SLC5A4Q9NY91 659 aa11.54□□□□□ -0.56
CLN6-209ENST00000569336 ZNF214Q9UL59 606 aaPredicted RBP11.54□□□□□ -0.56
CLN6-209ENST00000569336 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 INHAP05111 366 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 CYP21A2P08686 494 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 FCER1AP12319 257 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 CAPN2P17655 700 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 ERCC3P19447 782 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 PTPREP23469 700 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 MCCP23508 829 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 PTH1RQ03431 593 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 TMEM132BQ14DG7 1078 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 MORN1Q5T089 497 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 RIOX2Q8IUF8 465 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 NCOA7Q8NI08 942 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 KIFC2Q96AC6 838 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 ZSCAN10Q96SZ4 725 aaPredicted RBP11.53□□□□□ -0.56
CLN6-209ENST00000569336 TMEM47Q9BQJ4 181 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 KAT14Q9H8E8 782 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 SLC38A10Q9HBR0 1119 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 GJD2Q9UKL4 321 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 RBM8AQ9Y5S9 174 aaKnown RBP11.53□□□□□ -0.56
CLN6-209ENST00000569336 TNKSO95271 1327 aa11.53□□□□□ -0.56
CLN6-209ENST00000569336 ERICH2A1L162 156 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 ATP2A1O14983 1001 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 CYP2B6P20813 491 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 STAT3P40763 770 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 KCTD2Q14681 263 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 GPATCH4Q5T3I0 446 aaKnown RBP11.52□□□□□ -0.57
CLN6-209ENST00000569336 RNF20Q5VTR2 975 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 SNRNP48Q6IEG0 339 aaKnown RBP11.52□□□□□ -0.57
CLN6-209ENST00000569336 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 PNMA1Q8ND90 353 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 USP6NLQ92738 828 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 ZKSCAN3Q9BRR0 538 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 ZSWIM5Q9P217 1185 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 FBXO40Q9UH90 709 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 MTMR7Q9Y216 660 aa11.52□□□□□ -0.57
CLN6-209ENST00000569336 E7EWF7 191 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 HOXC6P09630 235 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 PDHBP11177 359 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 CCL5P13501 91 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 ADORA2AP29274 412 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 IFIT1BQ5T764 474 aaKnown RBP11.51□□□□□ -0.57
CLN6-209ENST00000569336 KCTD1Q719H9 257 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 DPP9Q86TI2 863 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 ENAHQ8N8S7 591 aaPredicted RBP11.51□□□□□ -0.57
CLN6-209ENST00000569336 REPS2Q8NFH8 660 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 TRIB2Q92519 343 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 MMP19Q99542 508 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 LSG1Q9H089 658 aaKnown RBP11.51□□□□□ -0.57
CLN6-209ENST00000569336 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 PNMA2Q9UL42 364 aa11.51□□□□□ -0.57
CLN6-209ENST00000569336 MYCP01106 439 aaPredicted RBP11.5□□□□□ -0.57
CLN6-209ENST00000569336 GJB1P08034 283 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 SNHG28P0DPA3 235 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 ZNF543Q08ER8 600 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 ASPRV1Q53RT3 343 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 MFSD14CQ5VZR4 134 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 CHST13Q8NET6 341 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 ANKS1AQ92625 1134 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 HMX1Q9NP08 348 aaPredicted RBP11.5□□□□□ -0.57
CLN6-209ENST00000569336 PRR12Q9ULL5 1215 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 RPTORQ8N122 1335 aa11.5□□□□□ -0.57
CLN6-209ENST00000569336 POTEFA5A3E0 1075 aa11.49□□□□□ -0.57
CLN6-209ENST00000569336 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
CLN6-209ENST00000569336 MTFR1Q15390 333 aa11.49□□□□□ -0.57
CLN6-209ENST00000569336 TKFCQ3LXA3 575 aa11.49□□□□□ -0.57
CLN6-209ENST00000569336 SYDE2Q5VT97 1194 aa11.49□□□□□ -0.57
CLN6-209ENST00000569336 OLFML2BQ68BL8 750 aa11.49□□□□□ -0.57
CLN6-209ENST00000569336 BTNL9Q6UXG8 535 aa11.49□□□□□ -0.57
CLN6-209ENST00000569336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLN6-209ENST00000569336 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
CLN6-209ENST00000569336 MTA3Q9BTC8 594 aa11.49□□□□□ -0.57
CLN6-209ENST00000569336 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLN6-209ENST00000569336 UNC93B1Q9H1C4 597 aa11.49□□□□□ -0.57
CLN6-209ENST00000569336 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms