RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 MMP19Q99542 508 aa17.05■□□□□ 0.32
COMMD4-225ENST00000569245 DSCC1Q9BVC3 393 aa17.05■□□□□ 0.32
COMMD4-225ENST00000569245 FARP2O94887 1054 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-225ENST00000569245 HOXC6P09630 235 aa17.04■□□□□ 0.32
COMMD4-225ENST00000569245 COPB2P35606 906 aa17.04■□□□□ 0.32
COMMD4-225ENST00000569245 KCTD2Q14681 263 aa17.04■□□□□ 0.32
COMMD4-225ENST00000569245 MAP3K21Q5TCX8 1036 aa17.04■□□□□ 0.32
COMMD4-225ENST00000569245 SNRNP48Q6IEG0 339 aaKnown RBP17.04■□□□□ 0.32
COMMD4-225ENST00000569245 NPLOC4Q8TAT6 608 aa17.04■□□□□ 0.32
COMMD4-225ENST00000569245 CHURC1Q8WUH1 139 aa17.04■□□□□ 0.32
COMMD4-225ENST00000569245 ESR2Q92731 530 aa17.04■□□□□ 0.32
COMMD4-225ENST00000569245 TEX13BQ9BXU2 312 aa17.04■□□□□ 0.32
COMMD4-225ENST00000569245 NBPF3Q9H094 633 aa17.04■□□□□ 0.32
COMMD4-225ENST00000569245 ZNF214Q9UL59 606 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-225ENST00000569245 TOP1P11387 765 aaKnown RBP17.03■□□□□ 0.32
COMMD4-225ENST00000569245 CAPN2P17655 700 aa17.03■□□□□ 0.32
COMMD4-225ENST00000569245 STAT2P52630 851 aa17.03■□□□□ 0.32
COMMD4-225ENST00000569245 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
COMMD4-225ENST00000569245 KCTD1Q719H9 257 aa17.03■□□□□ 0.32
COMMD4-225ENST00000569245 ABRAQ8N0Z2 381 aa17.03■□□□□ 0.32
COMMD4-225ENST00000569245 REPS2Q8NFH8 660 aa17.03■□□□□ 0.32
COMMD4-225ENST00000569245 ESYT1Q9BSJ8 1104 aa17.03■□□□□ 0.32
COMMD4-225ENST00000569245 TCP11L1Q9NUJ3 509 aa17.03■□□□□ 0.32
COMMD4-225ENST00000569245 FLRT1Q9NZU1 646 aa17.03■□□□□ 0.32
COMMD4-225ENST00000569245 GREB1LQ9C091 1923 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-225ENST00000569245 NEDD4P46934 1319 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 RAD50Q92878 1312 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 COBLO75128 1261 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 CNGA1P29973 690 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 CCND3P30281 292 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-225ENST00000569245 CYP2C19P33261 490 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 RCSD1Q6JBY9 416 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 DPF3Q92784 378 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 TMEM47Q9BQJ4 181 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 CRISPLD2Q9H0B8 497 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 IL25Q9H293 177 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 SLC38A10Q9HBR0 1119 aa17.02■□□□□ 0.32
COMMD4-225ENST00000569245 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
COMMD4-225ENST00000569245 RBBP6Q7Z6E9 1792 aaKnown RBP17.02■□□□□ 0.31
COMMD4-225ENST00000569245 SGSM2O43147 1006 aa17.01■□□□□ 0.31
COMMD4-225ENST00000569245 SEC24BO95487 1268 aa17.01■□□□□ 0.31
COMMD4-225ENST00000569245 PGK2P07205 417 aa17.01■□□□□ 0.31
COMMD4-225ENST00000569245 PRPF38BQ5VTL8 546 aaKnown RBP17.01■□□□□ 0.31
COMMD4-225ENST00000569245 DCAF4Q8WV16 495 aa17.01■□□□□ 0.31
COMMD4-225ENST00000569245 TTC14Q96N46 770 aa17.01■□□□□ 0.31
COMMD4-225ENST00000569245 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
COMMD4-225ENST00000569245 KDM4AO75164 1064 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 FDX1P10109 184 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 NOVP48745 357 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 OLFML2BQ68BL8 750 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 IQCA1Q86XH1 822 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 DDX11Q96FC9 970 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 HTATIP2Q9BUP3 242 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 RIPK3Q9Y572 518 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 PLXNB2O15031 1838 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 RLFQ13129 1914 aa17■□□□□ 0.31
COMMD4-225ENST00000569245 B4E1Z4 1266 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 ATP2A1O14983 1001 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 NT5C2P49902 561 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 OAZ1P54368 228 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 CCDC178Q5BJE1 867 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 CCDC174Q6PII3 467 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 RASGRP2Q7LDG7 609 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 PAWRQ96IZ0 340 aaKnown RBP16.99■□□□□ 0.31
COMMD4-225ENST00000569245 KRT23Q9C075 422 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 CNNM2Q9H8M5 875 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 A0A0G2JMZ2 1700 aa16.99■□□□□ 0.31
COMMD4-225ENST00000569245 FRMPD2Q68DX3 1309 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-225ENST00000569245 PDE4DIPQ5VU43 2346 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 EPB41L2O43491 1005 aaKnown RBP16.98■□□□□ 0.31
COMMD4-225ENST00000569245 PLA2G6O60733 806 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 REC8O95072 547 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 SLC16A2P36021 539 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 SNAP25P60880 206 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 NECAB2Q7Z6G3 386 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 UBE2Q1Q7Z7E8 422 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 ANKRD35Q8N283 1001 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 ANKLE1Q8NAG6 615 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 MAML3Q96JK9 1138 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 FBXO40Q9UH90 709 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 PRR12Q9ULL5 1215 aa16.98■□□□□ 0.31
COMMD4-225ENST00000569245 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-225ENST00000569245 PTH1RQ03431 593 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 TRDNQ13061 729 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 KIAA1211Q6ZU35 1233 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 DGKHQ86XP1 1220 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 CHST13Q8NET6 341 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 DIS3LQ8TF46 1054 aaKnown RBP16.97■□□□□ 0.31
COMMD4-225ENST00000569245 AGBL1Q96MI9 1066 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 ZSCAN10Q96SZ4 725 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-225ENST00000569245 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 ZSWIM5Q9P217 1185 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 DDX20Q9UHI6 824 aaKnown RBP16.97■□□□□ 0.31
COMMD4-225ENST00000569245 OGDHLQ9ULD0 1010 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 MYH4Q9Y623 1939 aa16.97■□□□□ 0.31
COMMD4-225ENST00000569245 ZNF792Q3KQV3 632 aa16.96■□□□□ 0.31
COMMD4-225ENST00000569245 PRAMEF19Q5SWL8 479 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms