RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 ADAMTS4O75173 837 aa13.08□□□□□ -0.32
TMX3-210ENST00000569053 SNAI1O95863 264 aaPredicted RBP13.08□□□□□ -0.32
TMX3-210ENST00000569053 RASA1P20936 1047 aa13.08□□□□□ -0.32
TMX3-210ENST00000569053 UBE3CQ15386 1083 aa13.08□□□□□ -0.32
TMX3-210ENST00000569053 CCDC17Q96LX7 622 aa13.08□□□□□ -0.32
TMX3-210ENST00000569053 TINF2Q9BSI4 451 aa13.08□□□□□ -0.32
TMX3-210ENST00000569053 XPNPEP3Q9NQH7 507 aa13.08□□□□□ -0.32
TMX3-210ENST00000569053 RAB11FIP3O75154 756 aa13.07□□□□□ -0.32
TMX3-210ENST00000569053 STAT3P40763 770 aa13.07□□□□□ -0.32
TMX3-210ENST00000569053 TSHZ3Q63HK5 1081 aa13.07□□□□□ -0.32
TMX3-210ENST00000569053 CCSAPQ6IQ19 270 aaPredicted RBP13.07□□□□□ -0.32
TMX3-210ENST00000569053 MYLIPQ8WY64 445 aa13.07□□□□□ -0.32
TMX3-210ENST00000569053 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
TMX3-210ENST00000569053 STRBPQ96SI9 672 aaKnown RBP13.07□□□□□ -0.32
TMX3-210ENST00000569053 EPB41L4AQ9HCS5 686 aaPredicted RBP13.07□□□□□ -0.32
TMX3-210ENST00000569053 MYH4Q9Y623 1939 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 DNAJC25-GNG10A0A024R161 153 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 IGKV6D-41A0A0C4DH26 115 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 A0A1W2PQ45 241 aaPredicted RBP13.06□□□□□ -0.32
TMX3-210ENST00000569053 A0A1W2PQY0 241 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 SLC25A27O95847 323 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 FAAP100Q0VG06 881 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 ZNF697Q5TEC3 545 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 KLHDC9Q8NEP7 349 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 KANSL2Q9H9L4 492 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 PRKAG2Q9UGJ0 569 aa13.06□□□□□ -0.32
TMX3-210ENST00000569053 F5H6K3 240 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 KIAA0355O15063 1070 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 RAD21O60216 631 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 NDUFB10O96000 172 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 RARBP10826 455 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 PTGS1P23219 599 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 KLRC3Q07444 240 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 SLC5A4Q9NY91 659 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 DDX19BQ9UMR2 479 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 DIS3Q9Y2L1 958 aaKnown RBP13.05□□□□□ -0.32
TMX3-210ENST00000569053 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
TMX3-210ENST00000569053 SYNRGQ9UMZ2 1314 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 ROBO3Q96MS0 1386 aa13.05□□□□□ -0.32
TMX3-210ENST00000569053 M0R2C6 588 aa13.04□□□□□ -0.32
TMX3-210ENST00000569053 CTAGE5O15320 804 aa13.04□□□□□ -0.32
TMX3-210ENST00000569053 PQBP1O60828 265 aaKnown RBP13.04□□□□□ -0.32
TMX3-210ENST00000569053 CLTBP09497 229 aa13.04□□□□□ -0.32
TMX3-210ENST00000569053 SMAD3P84022 425 aaKnown RBP13.04□□□□□ -0.32
TMX3-210ENST00000569053 KCTD2Q14681 263 aa13.04□□□□□ -0.32
TMX3-210ENST00000569053 SBK1Q52WX2 424 aa13.04□□□□□ -0.32
TMX3-210ENST00000569053 C16orf59Q7L2K0 433 aa13.04□□□□□ -0.32
TMX3-210ENST00000569053 USP38Q8NB14 1042 aa13.04□□□□□ -0.32
TMX3-210ENST00000569053 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.32
TMX3-210ENST00000569053 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
TMX3-210ENST00000569053 NRBP1Q9UHY1 535 aa13.04□□□□□ -0.32
TMX3-210ENST00000569053 POTEMA6NI47 508 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 HMMRO75330 724 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 PRDM1O75626 825 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 AKR1A1P14550 325 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 ACLYP53396 1101 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 KCNA10Q16322 511 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 SNRNP48Q6IEG0 339 aaKnown RBP13.03□□□□□ -0.32
TMX3-210ENST00000569053 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 MAFAQ8NHW3 353 aaPredicted RBP13.03□□□□□ -0.32
TMX3-210ENST00000569053 SEC62Q99442 399 aaKnown RBP13.03□□□□□ -0.32
TMX3-210ENST00000569053 SLF1Q9BQI6 1058 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 KATNBL1Q9H079 304 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 RAVER2Q9HCJ3 691 aaKnown RBP13.03□□□□□ -0.32
TMX3-210ENST00000569053 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 TACC3Q9Y6A5 838 aa13.03□□□□□ -0.32
TMX3-210ENST00000569053 MINDY4BA8MYZ0 360 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 CDK7P50613 346 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 GRIN2CQ14957 1233 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 TMEM63BQ5T3F8 832 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 RASGRP2Q7LDG7 609 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 ANKRD33Q7Z3H0 272 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 RNF180Q86T96 592 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 CPXCR1Q8N123 301 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 LRRCC1Q9C099 1032 aa13.02□□□□□ -0.33
TMX3-210ENST00000569053 ARPP21Q9UBL0 812 aaPredicted RBP13.02□□□□□ -0.33
TMX3-210ENST00000569053 LCTP09848 1927 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.01□□□□□ -0.33
TMX3-210ENST00000569053 GRXCR1A8MXD5 290 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 ATP2A1O14983 1001 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 FOXP2O15409 715 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 CNTN2Q02246 1040 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 LRRC47Q8N1G4 583 aaKnown RBP13.01□□□□□ -0.33
TMX3-210ENST00000569053 KBTBD3Q8NAB2 608 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 OTUD7AQ8TE49 926 aaPredicted RBP13.01□□□□□ -0.33
TMX3-210ENST00000569053 CHMP4CQ96CF2 233 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 CEP95Q96GE4 821 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 RNPC3Q96LT9 517 aaKnown RBP13.01□□□□□ -0.33
TMX3-210ENST00000569053 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.01□□□□□ -0.331e-7■■□□□ 11.9
TMX3-210ENST00000569053 TEX13BQ9BXU2 312 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 SLC38A10Q9HBR0 1119 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 PRDM6Q9NQX0 595 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 TMEM39AQ9NV64 488 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 ZHX1Q9UKY1 873 aaPredicted RBP13.01□□□□□ -0.33
TMX3-210ENST00000569053 TBX21Q9UL17 535 aa13.01□□□□□ -0.33
TMX3-210ENST00000569053 ASTN1O14525 1302 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1327.5 ms