RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ANAPC4Q9UJX5 808 aa11.26□□□□□ -0.61
SF3B3-211ENST00000568291 STX8Q9UNK0 236 aa11.26□□□□□ -0.61
SF3B3-211ENST00000568291 LAMA3Q16787 3333 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 SLC15A5A6NIM6 579 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 WDR46O15213 610 aaKnown RBP11.25□□□□□ -0.61
SF3B3-211ENST00000568291 MCCP23508 829 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 TMEM132BQ14DG7 1078 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 LRRC26Q2I0M4 334 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 MFSD14CQ5VZR4 134 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 LPAR1Q92633 364 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 UBE2OQ9C0C9 1292 aaKnown RBP11.25□□□□□ -0.61
SF3B3-211ENST00000568291 ZNF287Q9HBT7 754 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 IVNS1ABPQ9Y6Y0 642 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 NEDD4P46934 1319 aa11.25□□□□□ -0.61
SF3B3-211ENST00000568291 CUL9Q8IWT3 2517 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 HIP1O00291 1037 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 ZNF213O14771 459 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 TTLL1O95922 423 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 ERCC3P19447 782 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 AKNAD1Q5T1N1 836 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 SLFN13Q68D06 897 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 LHX8Q68G74 356 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 MFSD6Q6ZSS7 791 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 KCTD1Q719H9 257 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 NCAPG2Q86XI2 1143 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 TDHQ8IZJ6 230 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 CPXCR1Q8N123 301 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 SLC17A8Q8NDX2 589 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 CCDC136Q96JN2 1154 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 SPATC1LQ9H0A9 340 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 FLRT1Q9NZU1 646 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 TAF6LQ9Y6J9 622 aa11.24□□□□□ -0.61
SF3B3-211ENST00000568291 TMEM232C9JQI7 657 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 VWA5AO00534 786 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 ORC4O43929 436 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 FGRP09769 529 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 TAL1P17542 331 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-211ENST00000568291 PTPREP23469 700 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 MFAP1P55081 439 aaKnown RBP11.23□□□□□ -0.61
SF3B3-211ENST00000568291 GRB14Q14449 540 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 LRIT3Q3SXY7 679 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 CENPQQ7L2Z9 268 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-211ENST00000568291 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 NPLOC4Q8TAT6 608 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 MKL1Q969V6 931 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 RAVER2Q9HCJ3 691 aaKnown RBP11.23□□□□□ -0.61
SF3B3-211ENST00000568291 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
SF3B3-211ENST00000568291 PPP1R9AQ9ULJ8 1098 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 RIPK3Q9Y572 518 aa11.23□□□□□ -0.61
SF3B3-211ENST00000568291 B4E1Z4 1266 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 MSCO60682 206 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 COBLO75128 1261 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 KDM4AO75164 1064 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 PGK2P07205 417 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 HOXC6P09630 235 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 CNGA1P29973 690 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 SLC16A2P36021 539 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 FRMPD2Q68DX3 1309 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-211ENST00000568291 TTBK2Q6IQ55 1244 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 Q7L0L9 218 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 TICAM2Q86XR7 235 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 SLF1Q9BQI6 1058 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 TMEM47Q9BQJ4 181 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 DSCC1Q9BVC3 393 aa11.22□□□□□ -0.61
SF3B3-211ENST00000568291 GREB1LQ9C091 1923 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-211ENST00000568291 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 MYH4Q9Y623 1939 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 BMP3P12645 472 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 CYBAP13498 195 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 ADORA2AP29274 412 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 CYP2C19P33261 490 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 STAT3P40763 770 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 SLC1A4P43007 532 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 MDM2Q00987 491 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-211ENST00000568291 IKQ13123 557 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-211ENST00000568291 IMMTQ16891 758 aaKnown RBP11.21□□□□□ -0.61
SF3B3-211ENST00000568291 RCSD1Q6JBY9 416 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 GMCL1P1Q8NEA9 526 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 TRPV1Q8NER1 839 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 REPS2Q8NFH8 660 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 STAG1Q8WVM7 1258 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 SENP6Q9GZR1 1112 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-211ENST00000568291 CPVLQ9H3G5 476 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 ADAMTS5Q9UNA0 930 aa11.21□□□□□ -0.61
SF3B3-211ENST00000568291 SGSM2O43147 1006 aa11.2□□□□□ -0.62
SF3B3-211ENST00000568291 NEFLP07196 543 aa11.2□□□□□ -0.62
SF3B3-211ENST00000568291 GOLGA8HP0CJ92 632 aa11.2□□□□□ -0.62
SF3B3-211ENST00000568291 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-211ENST00000568291 CCDC96Q2M329 555 aa11.2□□□□□ -0.62
SF3B3-211ENST00000568291 PRAMEF19Q5SWL8 479 aa11.2□□□□□ -0.62
SF3B3-211ENST00000568291 SNRNP48Q6IEG0 339 aaKnown RBP11.2□□□□□ -0.62
SF3B3-211ENST00000568291 CCDC174Q6PII3 467 aa11.2□□□□□ -0.62
SF3B3-211ENST00000568291 CHST3Q7LGC8 479 aa11.2□□□□□ -0.62
SF3B3-211ENST00000568291 DPP9Q86TI2 863 aa11.2□□□□□ -0.62
SF3B3-211ENST00000568291 PRPF38AQ8NAV1 312 aaKnown RBP11.2□□□□□ -0.62
SF3B3-211ENST00000568291 HOMER2Q9NSB8 354 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms