RNA–Protein interactions for RNA: ENST00000567949.5

CTU2-210, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-210ENST00000567949 GPATCH4Q5T3I0 446 aaKnown RBP23.39■■□□□ 1.34
CTU2-210ENST00000567949 MTMR14Q8NCE2 650 aa23.39■■□□□ 1.34
CTU2-210ENST00000567949 RASGRP4Q8TDF6 673 aa23.39■■□□□ 1.34
CTU2-210ENST00000567949 EEF2P13639 858 aaKnown RBP23.39■■□□□ 1.33
CTU2-210ENST00000567949 SPDYE2Q495Y8 402 aa23.39■■□□□ 1.33
CTU2-210ENST00000567949 CSRNP1Q96S65 589 aa23.39■■□□□ 1.33
CTU2-210ENST00000567949 C6orf50Q9HD87 102 aa23.39■■□□□ 1.33
CTU2-210ENST00000567949 CLRN2A0PK11 232 aa23.38■■□□□ 1.33
CTU2-210ENST00000567949 TCP10L2B9ZVM9 353 aa23.38■■□□□ 1.33
CTU2-210ENST00000567949 GNA11P29992 359 aa23.38■■□□□ 1.33
CTU2-210ENST00000567949 ABCB5Q2M3G0 1257 aa23.38■■□□□ 1.33
CTU2-210ENST00000567949 SHROOM1Q2M3G4 852 aaPredicted RBP23.38■■□□□ 1.33
CTU2-210ENST00000567949 FAM43AQ8N2R8 423 aa23.38■■□□□ 1.33
CTU2-210ENST00000567949 CNNM3Q8NE01 707 aa23.38■■□□□ 1.33
CTU2-210ENST00000567949 FAM151AQ8WW52 585 aa23.38■■□□□ 1.33
CTU2-210ENST00000567949 SGIP1Q9BQI5 828 aa23.38■■□□□ 1.33
CTU2-210ENST00000567949 CD2APQ9Y5K6 639 aa23.38■■□□□ 1.33
CTU2-210ENST00000567949 ESYT2A0FGR8 921 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 SMCO2A6NFE2 343 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 IQCB1Q15051 598 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 ZRSR1Q15695 479 aaKnown RBP23.37■■□□□ 1.33
CTU2-210ENST00000567949 PPP1R1BQ9UD71 204 aaPredicted RBP23.37■■□□□ 1.33
CTU2-210ENST00000567949 HERC5Q9UII4 1024 aaKnown RBP23.37■■□□□ 1.33
CTU2-210ENST00000567949 AP5Z1O43299 807 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 MCM7P33993 719 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 SEPT2Q15019 361 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 CCDC96Q2M329 555 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 CEP57L1Q8IYX8 460 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 JDP2Q8WYK2 163 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 TUBE1Q9UJT0 475 aa23.37■■□□□ 1.33
CTU2-210ENST00000567949 A0A087WWV3 80 aa23.36■■□□□ 1.33
CTU2-210ENST00000567949 POLR2DO15514 142 aaKnown RBP23.36■■□□□ 1.33
CTU2-210ENST00000567949 GDF11O95390 407 aa23.36■■□□□ 1.33
CTU2-210ENST00000567949 ICA1Q05084 483 aa23.36■■□□□ 1.33
CTU2-210ENST00000567949 FKBP1CQ5VVH2 108 aa23.36■■□□□ 1.33
CTU2-210ENST00000567949 CIAPIN1Q6FI81 312 aa23.36■■□□□ 1.33
CTU2-210ENST00000567949 SIAH1Q8IUQ4 282 aa23.36■■□□□ 1.33
CTU2-210ENST00000567949 ADGRF4Q8IZF3 695 aa23.36■■□□□ 1.33
CTU2-210ENST00000567949 NAT10Q9H0A0 1025 aaKnown RBP23.36■■□□□ 1.33
CTU2-210ENST00000567949 JMJD4Q9H9V9 463 aa23.36■■□□□ 1.33
CTU2-210ENST00000567949 NFKBIEO00221 500 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 NLRP12P59046 1061 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 PLCB2Q00722 1185 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 RBM26Q5T8P6 1007 aaKnown RBP23.35■■□□□ 1.33
CTU2-210ENST00000567949 TTBK2Q6IQ55 1244 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 USP49Q70CQ1 688 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 KRT25Q7Z3Z0 450 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 DCAF4Q8WV16 495 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 HOOK1Q9UJC3 728 aaKnown RBP23.35■■□□□ 1.33
CTU2-210ENST00000567949 CNTNAP1P78357 1384 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 PNMA6FA0A0J9YX94 578 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 ARL6IP4Q66PJ3 421 aaKnown RBP23.35■■□□□ 1.33
CTU2-210ENST00000567949 C4orf32Q8N8J7 132 aa23.35■■□□□ 1.33
CTU2-210ENST00000567949 PNOCQ13519 176 aa23.34■■□□□ 1.33
CTU2-210ENST00000567949 SLFN13Q68D06 897 aa23.34■■□□□ 1.33
CTU2-210ENST00000567949 KCTD1Q719H9 257 aa23.34■■□□□ 1.33
CTU2-210ENST00000567949 MTMR8Q96EF0 704 aa23.34■■□□□ 1.33
CTU2-210ENST00000567949 ZBED3Q96IU2 234 aaPredicted RBP23.34■■□□□ 1.33
CTU2-210ENST00000567949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.34■■□□□ 1.33
CTU2-210ENST00000567949 CCDC39Q9UFE4 941 aa23.34■■□□□ 1.33
CTU2-210ENST00000567949 VWA3AA6NCI4 1184 aa23.33■■□□□ 1.33
CTU2-210ENST00000567949 ESPNB1AK53 854 aa23.33■■□□□ 1.33
CTU2-210ENST00000567949 MDM2Q00987 491 aaPredicted RBP23.33■■□□□ 1.33
CTU2-210ENST00000567949 INF2Q27J81 1249 aa23.33■■□□□ 1.33
CTU2-210ENST00000567949 SYMPKQ92797 1274 aaKnown RBP23.33■■□□□ 1.33
CTU2-210ENST00000567949 EPSTI1Q96J88 318 aa23.33■■□□□ 1.33
CTU2-210ENST00000567949 SERTAD1Q9UHV2 236 aa23.33■■□□□ 1.33
CTU2-210ENST00000567949 GH2P01242 217 aa23.33■■□□□ 1.32
CTU2-210ENST00000567949 RRP1BQ14684 758 aaKnown RBP23.33■■□□□ 1.32
CTU2-210ENST00000567949 TNIP1Q15025 636 aa23.33■■□□□ 1.32
CTU2-210ENST00000567949 DPCR1Q3MIW9 517 aa23.33■■□□□ 1.32
CTU2-210ENST00000567949 PPP1R18Q6NYC8 613 aa23.33■■□□□ 1.32
CTU2-210ENST00000567949 BPIFA3Q9BQP9 254 aa23.33■■□□□ 1.32
CTU2-210ENST00000567949 GOLGA6L19H0YKK7 550 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 BIN1O00499 593 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 ACTN4O43707 911 aaKnown RBP23.32■■□□□ 1.32
CTU2-210ENST00000567949 MYO1BO43795 1136 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 SLC16A2P36021 539 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 SLC1A4P43007 532 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 JAG1P78504 1218 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 NONOQ15233 471 aaKnown RBP eCLIP23.32■■□□□ 1.32
CTU2-210ENST00000567949 KANK3Q6NY19 840 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 FAM83AQ86UY5 434 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 DHX40Q8IX18 779 aaKnown RBP23.32■■□□□ 1.32
CTU2-210ENST00000567949 GMCL1P1Q8NEA9 526 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 COA7Q96BR5 231 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 VEZTQ9HBM0 779 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 BCS1LQ9Y276 419 aa23.32■■□□□ 1.32
CTU2-210ENST00000567949 MMP14P50281 582 aa23.31■■□□□ 1.32
CTU2-210ENST00000567949 IL17AQ16552 155 aa23.31■■□□□ 1.32
CTU2-210ENST00000567949 BECN2A8MW95 431 aa23.31■■□□□ 1.32
CTU2-210ENST00000567949 USP17L10C9JJH3 530 aa23.31■■□□□ 1.32
CTU2-210ENST00000567949 ZBTB5O15062 677 aa23.31■■□□□ 1.32
CTU2-210ENST00000567949 ADCY7P51828 1080 aa23.31■■□□□ 1.32
CTU2-210ENST00000567949 REXO1Q8N1G1 1221 aaKnown RBP23.31■■□□□ 1.32
CTU2-210ENST00000567949 PDILTQ8N807 584 aa23.31■■□□□ 1.32
CTU2-210ENST00000567949 LTBP3Q9NS15 1303 aa23.31■■□□□ 1.32
CTU2-210ENST00000567949 F5H6K3 240 aa23.3■■□□□ 1.32
CTU2-210ENST00000567949 PPP1R11O60927 126 aaPredicted RBP23.3■■□□□ 1.32
CTU2-210ENST00000567949 KLRC3Q07444 240 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms