RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 SLC16A2P36021 539 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 PRMT2P55345 433 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 ZNF543Q08ER8 600 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 KRT32Q14532 448 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 ADCK5Q3MIX3 580 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 GPR142Q7Z601 462 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 PLEKHH3Q7Z736 793 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 NCAPG2Q86XI2 1143 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 CPXCR1Q8N123 301 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 ABHD8Q96I13 439 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 NEK1Q96PY6 1258 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 LRRC2Q9BYS8 371 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 SENP2Q9HC62 589 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 HPS5Q9UPZ3 1129 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 SMCHD1A6NHR9 2005 aa14.9□□□□□ -0.02
GINS3-209ENST00000567909 SNHG28P0DPA3 235 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 ERCC3P19447 782 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 STAT3P40763 770 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 FLT3LGP49771 235 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 SNAP25P60880 206 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 REPS2Q8NFH8 660 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 IGDCC4Q8TDY8 1250 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 USP26Q9BXU7 913 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 SLC38A10Q9HBR0 1119 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 RAVER2Q9HCJ3 691 aaKnown RBP14.89□□□□□ -0.03
GINS3-209ENST00000567909 GPHNQ9NQX3 736 aaPredicted RBP14.89□□□□□ -0.03
GINS3-209ENST00000567909 PRR12Q9ULL5 1215 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 SNX14Q9Y5W7 946 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 IVNS1ABPQ9Y6Y0 642 aa14.89□□□□□ -0.03
GINS3-209ENST00000567909 CENPFP49454 3210 aa14.88□□□□□ -0.03
GINS3-209ENST00000567909 BAZ2BQ9UIF8 2168 aaKnown RBP14.88□□□□□ -0.03
GINS3-209ENST00000567909 PLA2G6O60733 806 aa14.88□□□□□ -0.03
GINS3-209ENST00000567909 TSGA10IPQ3SY00 556 aa14.88□□□□□ -0.03
GINS3-209ENST00000567909 SLC9C1Q4G0N8 1177 aa14.88□□□□□ -0.03
GINS3-209ENST00000567909 SYDE2Q5VT97 1194 aa14.88□□□□□ -0.03
GINS3-209ENST00000567909 SNRNP48Q6IEG0 339 aaKnown RBP14.88□□□□□ -0.03
GINS3-209ENST00000567909 CCDC174Q6PII3 467 aa14.88□□□□□ -0.03
GINS3-209ENST00000567909 NFXL1Q6ZNB6 911 aa14.88□□□□□ -0.03
GINS3-209ENST00000567909 TMEM87BQ96K49 555 aa14.88□□□□□ -0.03
GINS3-209ENST00000567909 TCEANC2Q96MN5 208 aa14.88□□□□□ -0.03
GINS3-209ENST00000567909 JAKMIP1Q96N16 626 aaKnown RBP14.88□□□□□ -0.03
GINS3-209ENST00000567909 ZNF214Q9UL59 606 aaPredicted RBP14.88□□□□□ -0.03
GINS3-209ENST00000567909 PLXNA1Q9UIW2 1896 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 SH2B2O14492 632 aaPredicted RBP14.87□□□□□ -0.03
GINS3-209ENST00000567909 SLC25A27O95847 323 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 PARP1P09874 1014 aaKnown RBP14.87□□□□□ -0.03
GINS3-209ENST00000567909 FDX1P10109 184 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 CYP2B6P20813 491 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 GPATCH4Q5T3I0 446 aaKnown RBP14.87□□□□□ -0.03
GINS3-209ENST00000567909 BTNL9Q6UXG8 535 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 CATIPQ7Z7H3 387 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 RIOX2Q8IUF8 465 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 SHCBP1Q8NEM2 672 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 SH3TC2Q8TF17 1288 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 NUP133Q8WUM0 1156 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 SOCS4Q8WXH5 440 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 KCNB2Q92953 911 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 NUDT12Q9BQG2 462 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 TEX13BQ9BXU2 312 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 UBA5Q9GZZ9 404 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 CPVLQ9H3G5 476 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 MROH8Q9H579 483 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 LY9Q9HBG7 655 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 GJD2Q9UKL4 321 aa14.87□□□□□ -0.03
GINS3-209ENST00000567909 CCDC69A6NI79 296 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 CCDC85CA6NKD9 419 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 EPB41L2O43491 1005 aaKnown RBP14.86□□□□□ -0.03
GINS3-209ENST00000567909 DHX16O60231 1041 aaKnown RBP14.86□□□□□ -0.03
GINS3-209ENST00000567909 ADCY3O60266 1144 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 CAPN15O75808 1086 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 CPA1P15085 419 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 ELNP15502 786 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 PTPREP23469 700 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 ASPRV1Q53RT3 343 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 DHX32Q7L7V1 743 aaKnown RBP14.86□□□□□ -0.03
GINS3-209ENST00000567909 AGBL1Q96MI9 1066 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 MTA3Q9BTC8 594 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 HOMER2Q9NSB8 354 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 BIN2Q9UBW5 565 aaPredicted RBP14.86□□□□□ -0.03
GINS3-209ENST00000567909 RIPK3Q9Y572 518 aa14.86□□□□□ -0.03
GINS3-209ENST00000567909 SLC15A5A6NIM6 579 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 MYCP01106 439 aaPredicted RBP14.85□□□□□ -0.03
GINS3-209ENST00000567909 HMGB1P09429 215 aaKnown RBP14.85□□□□□ -0.03
GINS3-209ENST00000567909 GRK4P32298 578 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 COPB2P35606 906 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 OAZ1P54368 228 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 FGD1P98174 961 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 IRF5Q13568 498 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 MORN1Q5T089 497 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 BLOC1S2Q6QNY1 142 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 ZNF654Q8IZM8 581 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 STAG2Q8N3U4 1231 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 MYL10Q9BUA6 226 aa14.85□□□□□ -0.03
GINS3-209ENST00000567909 ATP2A1O14983 1001 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 EIF5BO60841 1220 aaKnown RBP14.84□□□□□ -0.03
GINS3-209ENST00000567909 SEC24BO95487 1268 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 FCER1AP12319 257 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 ALAS1P13196 640 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 TAL1P17542 331 aaPredicted RBP14.84□□□□□ -0.03
GINS3-209ENST00000567909 CASTP20810 708 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms