RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 SNHG28P0DPA3 235 aa25.4■■□□□ 1.66
NME3-210ENST00000567271 PTPREP23469 700 aa25.4■■□□□ 1.66
NME3-210ENST00000567271 SEC23AQ15436 765 aa25.4■■□□□ 1.66
NME3-210ENST00000567271 CCDC96Q2M329 555 aa25.4■■□□□ 1.66
NME3-210ENST00000567271 RIOX2Q8IUF8 465 aa25.4■■□□□ 1.66
NME3-210ENST00000567271 MROH8Q9H579 483 aa25.4■■□□□ 1.66
NME3-210ENST00000567271 KAT14Q9H8E8 782 aa25.4■■□□□ 1.66
NME3-210ENST00000567271 PLXNB2O15031 1838 aa25.4■■□□□ 1.66
NME3-210ENST00000567271 SLC15A5A6NIM6 579 aa25.39■■□□□ 1.66
NME3-210ENST00000567271 ATP2A1O14983 1001 aa25.39■■□□□ 1.66
NME3-210ENST00000567271 FDX1P10109 184 aa25.39■■□□□ 1.66
NME3-210ENST00000567271 IKQ13123 557 aaPredicted RBP25.39■■□□□ 1.66
NME3-210ENST00000567271 NCAPG2Q86XI2 1143 aa25.39■■□□□ 1.66
NME3-210ENST00000567271 MB21D2Q8IYB1 491 aaPredicted RBP25.39■■□□□ 1.66
NME3-210ENST00000567271 PNMA1Q8ND90 353 aa25.39■■□□□ 1.66
NME3-210ENST00000567271 COL11A1P12107 1806 aaPredicted RBP25.39■■□□□ 1.65
NME3-210ENST00000567271 XRCC5P13010 732 aaKnown RBP25.38■■□□□ 1.65
NME3-210ENST00000567271 ELNP15502 786 aa25.38■■□□□ 1.65
NME3-210ENST00000567271 CYP2B6P20813 491 aa25.38■■□□□ 1.65
NME3-210ENST00000567271 GRB14Q14449 540 aa25.38■■□□□ 1.65
NME3-210ENST00000567271 IFIT1BQ5T764 474 aaKnown RBP25.38■■□□□ 1.65
NME3-210ENST00000567271 TTBK2Q6IQ55 1244 aa25.38■■□□□ 1.65
NME3-210ENST00000567271 BTNL9Q6UXG8 535 aa25.38■■□□□ 1.65
NME3-210ENST00000567271 TEX13BQ9BXU2 312 aa25.38■■□□□ 1.65
NME3-210ENST00000567271 PRR12Q9ULL5 1215 aa25.38■■□□□ 1.65
NME3-210ENST00000567271 CTDP1Q9Y5B0 961 aaPredicted RBP25.38■■□□□ 1.65
NME3-210ENST00000567271 IVNS1ABPQ9Y6Y0 642 aa25.38■■□□□ 1.65
NME3-210ENST00000567271 FRMPD2Q68DX3 1309 aaPredicted RBP25.37■■□□□ 1.65
NME3-210ENST00000567271 STRNO43815 780 aa25.37■■□□□ 1.65
NME3-210ENST00000567271 RGS2P41220 211 aa25.37■■□□□ 1.65
NME3-210ENST00000567271 OAZ1P54368 228 aa25.37■■□□□ 1.65
NME3-210ENST00000567271 ZNF543Q08ER8 600 aa25.37■■□□□ 1.65
NME3-210ENST00000567271 MAP2K5Q13163 448 aa25.37■■□□□ 1.65
NME3-210ENST00000567271 RNF20Q5VTR2 975 aa25.37■■□□□ 1.65
NME3-210ENST00000567271 GPCPD1Q9NPB8 672 aa25.37■■□□□ 1.65
NME3-210ENST00000567271 IFIT3O14879 490 aaKnown RBP25.36■■□□□ 1.65
NME3-210ENST00000567271 COPB2P35606 906 aa25.36■■□□□ 1.65
NME3-210ENST00000567271 ANTXR2P58335 489 aa25.36■■□□□ 1.65
NME3-210ENST00000567271 SNRNP48Q6IEG0 339 aaKnown RBP25.36■■□□□ 1.65
NME3-210ENST00000567271 CHST3Q7LGC8 479 aa25.36■■□□□ 1.65
NME3-210ENST00000567271 CPXCR1Q8N123 301 aa25.36■■□□□ 1.65
NME3-210ENST00000567271 RAVER2Q9HCJ3 691 aaKnown RBP25.36■■□□□ 1.65
NME3-210ENST00000567271 BIN2Q9UBW5 565 aaPredicted RBP25.36■■□□□ 1.65
NME3-210ENST00000567271 SLC16A2P36021 539 aa25.35■■□□□ 1.65
NME3-210ENST00000567271 ABRAQ8N0Z2 381 aa25.35■■□□□ 1.65
NME3-210ENST00000567271 ERICH2A1L162 156 aa25.34■■□□□ 1.65
NME3-210ENST00000567271 REC8O95072 547 aa25.34■■□□□ 1.65
NME3-210ENST00000567271 SOX10P56693 466 aa25.34■■□□□ 1.65
NME3-210ENST00000567271 UBXN2AP68543 259 aa25.34■■□□□ 1.65
NME3-210ENST00000567271 SART3Q15020 963 aaKnown RBP25.34■■□□□ 1.65
NME3-210ENST00000567271 TSGA10IPQ3SY00 556 aa25.34■■□□□ 1.65
NME3-210ENST00000567271 GPATCH4Q5T3I0 446 aaKnown RBP25.34■■□□□ 1.65
NME3-210ENST00000567271 IGDCC4Q8TDY8 1250 aa25.34■■□□□ 1.65
NME3-210ENST00000567271 APBA2Q99767 749 aa25.34■■□□□ 1.65
NME3-210ENST00000567271 RIPK3Q9Y572 518 aa25.34■■□□□ 1.65
NME3-210ENST00000567271 MYCP01106 439 aaPredicted RBP25.33■■□□□ 1.65
NME3-210ENST00000567271 INHAP05111 366 aa25.33■■□□□ 1.65
NME3-210ENST00000567271 HOXC6P09630 235 aa25.33■■□□□ 1.65
NME3-210ENST00000567271 GOLGA8HP0CJ92 632 aa25.33■■□□□ 1.65
NME3-210ENST00000567271 FCER1AP12319 257 aa25.33■■□□□ 1.65
NME3-210ENST00000567271 ADORA2AP29274 412 aa25.33■■□□□ 1.65
NME3-210ENST00000567271 COL9A3Q14050 684 aaPredicted RBP25.33■■□□□ 1.65
NME3-210ENST00000567271 SYDE2Q5VT97 1194 aa25.33■■□□□ 1.65
NME3-210ENST00000567271 RASEFQ8IZ41 740 aa25.33■■□□□ 1.65
NME3-210ENST00000567271 TRIB2Q92519 343 aa25.33■■□□□ 1.65
NME3-210ENST00000567271 MTA3Q9BTC8 594 aa25.33■■□□□ 1.65
NME3-210ENST00000567271 ZNF536O15090 1300 aa25.33■■□□□ 1.64
NME3-210ENST00000567271 PRC1O43663 620 aa25.32■■□□□ 1.64
NME3-210ENST00000567271 HMGCRP04035 888 aa25.32■■□□□ 1.64
NME3-210ENST00000567271 MCM5P33992 734 aa25.32■■□□□ 1.64
NME3-210ENST00000567271 SLC4A3P48751 1232 aa25.32■■□□□ 1.64
NME3-210ENST00000567271 SNAP25P60880 206 aa25.32■■□□□ 1.64
NME3-210ENST00000567271 WTAPQ15007 396 aa25.32■■□□□ 1.64
NME3-210ENST00000567271 MTFR1Q15390 333 aa25.32■■□□□ 1.64
NME3-210ENST00000567271 TMEM67Q5HYA8 995 aa25.32■■□□□ 1.64
NME3-210ENST00000567271 TRMT44Q8IYL2 757 aaKnown RBP25.32■■□□□ 1.64
NME3-210ENST00000567271 RANBP17Q9H2T7 1088 aaKnown RBP25.32■■□□□ 1.64
NME3-210ENST00000567271 SENP2Q9HC62 589 aa25.32■■□□□ 1.64
NME3-210ENST00000567271 ZKSCAN1P17029 563 aaPredicted RBP25.31■■□□□ 1.64
NME3-210ENST00000567271 CCL14Q16627 93 aa25.31■■□□□ 1.64
NME3-210ENST00000567271 DPP9Q86TI2 863 aa25.31■■□□□ 1.64
NME3-210ENST00000567271 KCNB2Q92953 911 aa25.31■■□□□ 1.64
NME3-210ENST00000567271 AGBL1Q96MI9 1066 aa25.31■■□□□ 1.64
NME3-210ENST00000567271 MMP19Q99542 508 aa25.31■■□□□ 1.64
NME3-210ENST00000567271 TMEM106CQ9BVX2 250 aa25.31■■□□□ 1.64
NME3-210ENST00000567271 COBLO75128 1261 aa25.3■■□□□ 1.64
NME3-210ENST00000567271 CCL5P13501 91 aa25.3■■□□□ 1.64
NME3-210ENST00000567271 HSPA4P34932 840 aa25.3■■□□□ 1.64
NME3-210ENST00000567271 KCTD2Q14681 263 aa25.3■■□□□ 1.64
NME3-210ENST00000567271 ASPRV1Q53RT3 343 aa25.3■■□□□ 1.64
NME3-210ENST00000567271 CCDC174Q6PII3 467 aa25.3■■□□□ 1.64
NME3-210ENST00000567271 NPLOC4Q8TAT6 608 aa25.3■■□□□ 1.64
NME3-210ENST00000567271 ZNF236Q9UL36 1845 aa25.29■■□□□ 1.64
NME3-210ENST00000567271 EPB41L2O43491 1005 aaKnown RBP25.29■■□□□ 1.64
NME3-210ENST00000567271 PARP1P09874 1014 aaKnown RBP25.29■■□□□ 1.64
NME3-210ENST00000567271 TRIM32Q13049 653 aa25.29■■□□□ 1.64
NME3-210ENST00000567271 CHST13Q8NET6 341 aa25.29■■□□□ 1.64
NME3-210ENST00000567271 TMEM87BQ96K49 555 aa25.29■■□□□ 1.64
NME3-210ENST00000567271 NEK1Q96PY6 1258 aa25.29■■□□□ 1.64
NME3-210ENST00000567271 UBA5Q9GZZ9 404 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms