RNA–Protein interactions for RNA: ENST00000567015.5

UTP4-208, Transcript of UTP4, small subunit processome component, human

TSL 2

Gene UTP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UTP4-208	ENST00000567015	ZKSCAN1	P17029	563 aa	Predicted RBP	13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	ADORA2A	P29274	412 aa		13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	CACNB2	Q08289	660 aa	Predicted RBP	13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	CCL14	Q16627	93 aa		13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	CHURC1	Q8WUH1	139 aa		13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	ESR2	Q92731	530 aa		13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	TMEM47	Q9BQJ4	181 aa		13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	TEX13B	Q9BXU2	312 aa		13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	FLRT1	Q9NZU1	646 aa		13.96	□□□□□ -0.17
UTP4-208	ENST00000567015	NEDD4	P46934	1319 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	MYC	P01106	439 aa	Predicted RBP	13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	FCER1A	P12319	257 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	MCC	P23508	829 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	SLC1A4	P43007	532 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	STAT2	P52630	851 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	IMMT	Q16891	758 aa	Known RBP	13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	CCDC178	Q5BJE1	867 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	BMP2KL	Q5H9B9	411 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	ANKLE1	Q8NAG6	615 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	DCAF4	Q8WV16	495 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	MAP4K1	Q92918	833 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	ZSWIM5	Q9P217	1185 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	OGDHL	Q9ULD0	1010 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	MKI67	P46013	3256 aa	Known RBP	13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	PLXNA1	Q9UIW2	1896 aa		13.95	□□□□□ -0.18
UTP4-208	ENST00000567015	ZNF536	O15090	1300 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	DNAJC25-GNG10	A0A024R161	153 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	TMEM232	C9JQI7	657 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	RAD21	O60216	631 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	ZBED4	O75132	1171 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	PRKAR2A	P13861	404 aa	Known RBP	13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	PTH1R	Q03431	593 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	PLS1	Q14651	629 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	ZNF792	Q3KQV3	632 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	RRP12	Q5JTH9	1297 aa	Known RBP	13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	LHX8	Q68G74	356 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	NCAPG2	Q86XI2	1143 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	DEFB118	Q96PH6	123 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	KRT23	Q9C075	422 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	CNNM2	Q9H8M5	875 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	SLC5A4	Q9NY91	659 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	RIPK3	Q9Y572	518 aa		13.94	□□□□□ -0.18
UTP4-208	ENST00000567015	CYP21A2	P08686	494 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	PDHB	P11177	359 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	MNX1	P50219	401 aa	Predicted RBP	13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	WDR78	Q5VTH9	848 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	MFSD14C	Q5VZR4	134 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	DPP9	Q86TI2	863 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	CHST13	Q8NET6	341 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	MAML3	Q96JK9	1138 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	CWC22	Q9HCG8	908 aa	Known RBP	13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	TOMM22	Q9NS69	142 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	NRBP1	Q9UHY1	535 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	SMCHD1	A6NHR9	2005 aa		13.93	□□□□□ -0.18
UTP4-208	ENST00000567015	FRMPD3	Q5JV73	1810 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015		B4E1Z4	1266 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	KDM4A	O75164	1064 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	CYBA	P13498	195 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	TKFC	Q3LXA3	575 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	SNRNP48	Q6IEG0	339 aa	Known RBP	13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	KCTD1	Q719H9	257 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	IQCA1	Q86XH1	822 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	MSL3	Q8N5Y2	521 aa	Known RBP	13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	KIFC2	Q96AC6	838 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	FBXO40	Q9UH90	709 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	PRR12	Q9ULL5	1215 aa		13.92	□□□□□ -0.18
UTP4-208	ENST00000567015		U3KPZ7	1027 aa	Predicted RBP	13.92	□□□□□ -0.18
UTP4-208	ENST00000567015	MSC	O60682	206 aa		13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	CCND3	P30281	292 aa	Predicted RBP	13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	ZNF543	Q08ER8	600 aa		13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	KCTD2	Q14681	263 aa		13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	SEC23A	Q15436	765 aa		13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	ERICH6B	Q5W0A0	696 aa		13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	MAMDC4	Q6UXC1	1216 aa		13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	RASGRP2	Q7LDG7	609 aa		13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	TRPV1	Q8NER1	839 aa		13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	MMP19	Q99542	508 aa		13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	RANBP17	Q9H2T7	1088 aa	Known RBP	13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	RAVER2	Q9HCJ3	691 aa	Known RBP	13.91	□□□□□ -0.18
UTP4-208	ENST00000567015	FARP2	O94887	1054 aa	Predicted RBP	13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	TFRC	P02786	760 aa	Known RBP	13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	CYP2C19	P33261	490 aa		13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	GPATCH4	Q5T3I0	446 aa	Known RBP	13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	PRPF38B	Q5VTL8	546 aa	Known RBP	13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	TTBK2	Q6IQ55	1244 aa		13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	CPXCR1	Q8N123	301 aa		13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	ENAH	Q8N8S7	591 aa	Predicted RBP	13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	ESYT1	Q9BSJ8	1104 aa		13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	LSG1	Q9H089	658 aa	Known RBP	13.9	□□□□□ -0.18
UTP4-208	ENST00000567015	ICAM1	P05362	532 aa		13.89	□□□□□ -0.19
UTP4-208	ENST00000567015	FGD4	Q96M96	766 aa		13.89	□□□□□ -0.19
UTP4-208	ENST00000567015	ZKSCAN3	Q9BRR0	538 aa		13.89	□□□□□ -0.19
UTP4-208	ENST00000567015	TINF2	Q9BSI4	451 aa		13.89	□□□□□ -0.19
UTP4-208	ENST00000567015	MTA3	Q9BTC8	594 aa		13.89	□□□□□ -0.19
UTP4-208	ENST00000567015	PNMA2	Q9UL42	364 aa		13.89	□□□□□ -0.19
UTP4-208	ENST00000567015	TNKS	O95271	1327 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms