RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CCDC152Q4G0S7 254 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 PAPD7Q5XG87 772 aaKnown RBP24.3■■□□□ 1.48
SPSB3-208ENST00000566339 FAM196AQ6ZSG2 479 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 DZIP3Q86Y13 1208 aaKnown RBP24.3■■□□□ 1.48
SPSB3-208ENST00000566339 ACRBPQ8NEB7 543 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 NELFBQ8WX92 580 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 NUP58Q9BVL2 599 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 GNL3LQ9NVN8 582 aaKnown RBP24.3■■□□□ 1.48
SPSB3-208ENST00000566339 VPS18Q9P253 973 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 TAOK2Q9UL54 1235 aa24.3■■□□□ 1.48
SPSB3-208ENST00000566339 USP14P54578 494 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 VSNL1P62760 191 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 CCDC82Q8N4S0 544 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 SH3GLB2Q9NR46 395 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 V9GY48 417 aaPredicted RBP24.29■■□□□ 1.48
SPSB3-208ENST00000566339 LGALS16A8MUM7 142 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 ORC4O43929 436 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 RPN1P04843 607 aaKnown RBP24.29■■□□□ 1.48
SPSB3-208ENST00000566339 EARS2Q5JPH6 523 aaKnown RBP24.29■■□□□ 1.48
SPSB3-208ENST00000566339 WWC2Q6AWC2 1192 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 RASSF4Q9H2L5 321 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 ZSWIM4Q9H7M6 989 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 MAGEF1Q9HAY2 307 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 CAPN11Q9UMQ6 739 aa24.29■■□□□ 1.48
SPSB3-208ENST00000566339 CNTNAP5Q8WYK1 1306 aa24.28■■□□□ 1.48
SPSB3-208ENST00000566339 ANO9A1A5B4 782 aa24.28■■□□□ 1.48
SPSB3-208ENST00000566339 TRIM37O94972 964 aa24.28■■□□□ 1.48
SPSB3-208ENST00000566339 DDB1Q16531 1140 aa24.28■■□□□ 1.48
SPSB3-208ENST00000566339 NOM1Q5C9Z4 860 aaKnown RBP24.28■■□□□ 1.48
SPSB3-208ENST00000566339 SRLQ86TD4 932 aa24.28■■□□□ 1.48
SPSB3-208ENST00000566339 FAM205CA6NFA0 338 aa24.27■■□□□ 1.48
SPSB3-208ENST00000566339 CCT6AP40227 531 aaKnown RBP24.27■■□□□ 1.48
SPSB3-208ENST00000566339 STIM1Q13586 685 aa24.27■■□□□ 1.48
SPSB3-208ENST00000566339 ZNF174Q15697 407 aa24.27■■□□□ 1.48
SPSB3-208ENST00000566339 MEA1Q16626 185 aa24.27■■□□□ 1.48
SPSB3-208ENST00000566339 IQCEQ6IPM2 695 aa24.27■■□□□ 1.48
SPSB3-208ENST00000566339 CCDC170Q8IYT3 715 aa24.27■■□□□ 1.48
SPSB3-208ENST00000566339 CMTR1Q8N1G2 835 aaKnown RBP24.27■■□□□ 1.48
SPSB3-208ENST00000566339 MB21D1Q8N884 522 aa24.27■■□□□ 1.48
SPSB3-208ENST00000566339 HELBQ8NG08 1087 aaPredicted RBP24.27■■□□□ 1.48
SPSB3-208ENST00000566339 LUC7L2Q9Y383 392 aaKnown RBP24.27■■□□□ 1.48
SPSB3-208ENST00000566339 PDS5AQ29RF7 1337 aaKnown RBP24.27■■□□□ 1.48
SPSB3-208ENST00000566339 EIF5P55010 431 aaKnown RBP24.26■■□□□ 1.47
SPSB3-208ENST00000566339 ADSSL1Q8N142 457 aa24.26■■□□□ 1.47
SPSB3-208ENST00000566339 RIOK1Q9BRS2 568 aaKnown RBP24.26■■□□□ 1.47
SPSB3-208ENST00000566339 ZBTB22O15209 634 aa24.26■■□□□ 1.47
SPSB3-208ENST00000566339 SCG2P13521 617 aa24.26■■□□□ 1.47
SPSB3-208ENST00000566339 CYLC1P35663 651 aaPredicted RBP24.26■■□□□ 1.47
SPSB3-208ENST00000566339 DNM2P50570 870 aa24.26■■□□□ 1.47
SPSB3-208ENST00000566339 CDK17Q00537 523 aa24.26■■□□□ 1.47
SPSB3-208ENST00000566339 GOLGA6L1Q8N7Z2 621 aa24.26■■□□□ 1.47
SPSB3-208ENST00000566339 VPS16Q9H269 839 aa24.26■■□□□ 1.47
SPSB3-208ENST00000566339 CUEDC2Q9H467 287 aa24.26■■□□□ 1.47
SPSB3-208ENST00000566339 TAB2Q9NYJ8 693 aa24.26■■□□□ 1.47
SPSB3-208ENST00000566339 PARP1P09874 1014 aaKnown RBP24.25■■□□□ 1.47
SPSB3-208ENST00000566339 HOXA7P31268 230 aaPredicted RBP24.25■■□□□ 1.47
SPSB3-208ENST00000566339 BAG6P46379 1132 aa24.25■■□□□ 1.47
SPSB3-208ENST00000566339 UBXN1Q04323 297 aa24.25■■□□□ 1.47
SPSB3-208ENST00000566339 PFKFB3Q16875 520 aaPredicted RBP24.25■■□□□ 1.47
SPSB3-208ENST00000566339 CTR9Q6PD62 1173 aa24.25■■□□□ 1.47
SPSB3-208ENST00000566339 SMYD4Q8IYR2 804 aaPredicted RBP24.25■■□□□ 1.47
SPSB3-208ENST00000566339 ZNF507Q8TCN5 953 aa24.25■■□□□ 1.47
SPSB3-208ENST00000566339 BBXQ8WY36 941 aaPredicted RBP24.25■■□□□ 1.47
SPSB3-208ENST00000566339 SAR1BQ9Y6B6 198 aa24.25■■□□□ 1.47
SPSB3-208ENST00000566339 A0A0U1RQJ8 604 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 MINDY4BA8MYZ0 360 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 MYO1CO00159 1063 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 KRT86O43790 486 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 RHOXF2BP0C7M4 288 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 BCAMP50895 628 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 FIGNQ5HY92 759 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 ATRIPQ8WXE1 791 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 SLF1Q9BQI6 1058 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 RHOXF2Q9BQY4 288 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 FAN1Q9Y2M0 1017 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.24■■□□□ 1.47
SPSB3-208ENST00000566339 LAD1O00515 517 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 PLEKHA8P1O95397 391 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 ITIH3Q06033 890 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 GALNT17Q6IS24 598 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 DHTKD1Q96HY7 919 aaPredicted RBP24.24■■□□□ 1.47
SPSB3-208ENST00000566339 REXO2Q9Y3B8 237 aaKnown RBP24.24■■□□□ 1.47
SPSB3-208ENST00000566339 CASZ1Q86V15 1759 aa24.24■■□□□ 1.47
SPSB3-208ENST00000566339 MYH13Q9UKX3 1938 aa24.23■■□□□ 1.47
SPSB3-208ENST00000566339 KIF5BP33176 963 aa24.23■■□□□ 1.47
SPSB3-208ENST00000566339 NLRP5P59047 1200 aa24.23■■□□□ 1.47
SPSB3-208ENST00000566339 EN1Q05925 392 aaPredicted RBP24.23■■□□□ 1.47
SPSB3-208ENST00000566339 MIGA1Q8NAN2 632 aa24.23■■□□□ 1.47
SPSB3-208ENST00000566339 MTRQ99707 1265 aa24.23■■□□□ 1.47
SPSB3-208ENST00000566339 CDCA7Q9BWT1 371 aaPredicted RBP24.23■■□□□ 1.47
SPSB3-208ENST00000566339 TSGA10Q9BZW7 698 aa24.23■■□□□ 1.47
SPSB3-208ENST00000566339 MAGEC2Q9UBF1 373 aaPredicted RBP24.23■■□□□ 1.47
SPSB3-208ENST00000566339 ZNF831Q5JPB2 1677 aa24.23■■□□□ 1.47
SPSB3-208ENST00000566339 MYH14Q7Z406 1995 aaKnown RBP24.22■■□□□ 1.47
SPSB3-208ENST00000566339 EIF3CLB5ME19 914 aaKnown RBP24.22■■□□□ 1.47
SPSB3-208ENST00000566339 CASP1P29466 404 aa24.22■■□□□ 1.47
SPSB3-208ENST00000566339 UBE4AQ14139 1066 aa24.22■■□□□ 1.47
SPSB3-208ENST00000566339 FAM114A1Q8IWE2 563 aa24.22■■□□□ 1.47
SPSB3-208ENST00000566339 C4orf32Q8N8J7 132 aa24.22■■□□□ 1.47
SPSB3-208ENST00000566339 EIF3CQ99613 913 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms