RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TRPA1O75762 1119 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 CD2BP2O95400 341 aaKnown RBP9.54□□□□□ -0.88
CDH13-208ENST00000566333 LARGE1O95461 756 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 TBC1D8O95759 1140 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 DSG3P32926 999 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 SLC16A2P36021 539 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 STAT2P52630 851 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 RCAN1P53805 252 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 AK2P54819 239 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 CAP1Q01518 475 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 GPATCH4Q5T3I0 446 aaKnown RBP9.54□□□□□ -0.88
CDH13-208ENST00000566333 OTUD7BQ6GQQ9 843 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 C17orf99Q6UX52 265 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 CATIPQ7Z7H3 387 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 NBPF11Q86T75 865 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 MAP3K14Q99558 947 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 ALDH8A1Q9H2A2 487 aaPredicted RBP9.54□□□□□ -0.88
CDH13-208ENST00000566333 GPCPD1Q9NPB8 672 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 FAM217BQ9NTX9 383 aaPredicted RBP9.54□□□□□ -0.88
CDH13-208ENST00000566333 BTBD7Q9P203 1132 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 TSKSQ9UJT2 592 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 FEM1BQ9UK73 627 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 ZNF214Q9UL59 606 aaPredicted RBP9.54□□□□□ -0.88
CDH13-208ENST00000566333 SLC12A7Q9Y666 1083 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 VWA5AO00534 786 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 FOXN1O15353 648 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 ZBTB43O43298 467 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 CYTH3O43739 400 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 PLEKHA8P1O95397 391 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 PARP1P09874 1014 aaKnown RBP9.53□□□□□ -0.88
CDH13-208ENST00000566333 HSPA1AP0DMV8 641 aaKnown RBP9.53□□□□□ -0.88
CDH13-208ENST00000566333 HSPA1BP0DMV9 641 aaKnown RBP9.53□□□□□ -0.88
CDH13-208ENST00000566333 TAL1P17542 331 aaPredicted RBP9.53□□□□□ -0.88
CDH13-208ENST00000566333 OSBPP22059 807 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 NEK4P51957 841 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 FUT2Q10981 343 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 ST3GAL1Q11201 340 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 COG2Q14746 738 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 RABEP1Q15276 862 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 FAM110CQ1W6H9 321 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 SYDE2Q5VT97 1194 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 NFXL1Q6ZNB6 911 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 TMTC3Q6ZXV5 915 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 FAM160B2Q86V87 743 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 CCDC144CPQ8IYA2 1237 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 TMTC2Q8N394 836 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 SMCR8Q8TEV9 937 aaPredicted RBP9.53□□□□□ -0.88
CDH13-208ENST00000566333 NUP133Q8WUM0 1156 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
CDH13-208ENST00000566333 RANBP17Q9H2T7 1088 aaKnown RBP9.53□□□□□ -0.88
CDH13-208ENST00000566333 SLC38A10Q9HBR0 1119 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 ZFYVE28Q9HCC9 887 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 RBPJLQ9UBG7 517 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 MORF4L1Q9UBU8 362 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 CPA4Q9UI42 421 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 PRR12Q9ULL5 1215 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 TPCN1Q9ULQ1 816 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 BRCA2P51587 3418 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 ZNF536O15090 1300 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 CNTNAP5Q8WYK1 1306 aa9.53□□□□□ -0.88
CDH13-208ENST00000566333 GOLGA8AA7E2F4 631 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 KLRF2D3W0D1 207 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 MYCNP04198 464 aaPredicted RBP9.52□□□□□ -0.89
CDH13-208ENST00000566333 CALM1P0DP23 149 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 CALM2P0DP24 149 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 CALM3P0DP25 149 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 HSPA8P11142 646 aaKnown RBP9.52□□□□□ -0.89
CDH13-208ENST00000566333 CTGFP29279 349 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 PDIA3P30101 505 aaKnown RBP9.52□□□□□ -0.89
CDH13-208ENST00000566333 CDC27P30260 824 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 GCLCP48506 637 aaPredicted RBP9.52□□□□□ -0.89
CDH13-208ENST00000566333 FGD1P98174 961 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 TMEM132BQ14DG7 1078 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 RTN1Q16799 776 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 NOM1Q5C9Z4 860 aaKnown RBP9.52□□□□□ -0.89
CDH13-208ENST00000566333 ANKRD13CQ8N6S4 541 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 PRPF38AQ8NAV1 312 aaKnown RBP9.52□□□□□ -0.89
CDH13-208ENST00000566333 FANCBQ8NB91 859 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 GTF3C2Q8WUA4 911 aaPredicted RBP9.52□□□□□ -0.89
CDH13-208ENST00000566333 KIFC2Q96AC6 838 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 MTMR8Q96EF0 704 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 PAGR1Q9BTK6 254 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 SPZ1Q9BXG8 430 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 UBA5Q9GZZ9 404 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 ISY1Q9ULR0 285 aaKnown RBP9.52□□□□□ -0.89
CDH13-208ENST00000566333 RABGAP1Q9Y3P9 1069 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 FRMPD3Q5JV73 1810 aa9.52□□□□□ -0.89
CDH13-208ENST00000566333 GPR25O00155 361 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 ATP2A1O14983 1001 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 PPP1R11O60927 126 aaPredicted RBP9.51□□□□□ -0.89
CDH13-208ENST00000566333 KIF5BP33176 963 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 METAP2P50579 478 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDH13-208ENST00000566333 SNAP25P60880 206 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 ERVK-9P63128 1117 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 ERVK-24P63145 666 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 IKQ13123 557 aaPredicted RBP9.51□□□□□ -0.89
CDH13-208ENST00000566333 SAMD1Q6SPF0 538 aaPredicted RBP9.51□□□□□ -0.89
CDH13-208ENST00000566333 NOL8Q76FK4 1167 aaKnown RBP9.51□□□□□ -0.89
CDH13-208ENST00000566333 ADGRF4Q8IZF3 695 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 CMTR1Q8N1G2 835 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms