RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 GPKOWQ92917 476 aaPredicted RBP eCLIP21.62■■□□□ 1.05
COMMD4-213ENST00000565834 SH3GLB2Q9NR46 395 aa21.62■■□□□ 1.05
COMMD4-213ENST00000565834 TRIM75PA6NK02 468 aa21.61■■□□□ 1.05
COMMD4-213ENST00000565834 STAT2P52630 851 aa21.61■■□□□ 1.05
COMMD4-213ENST00000565834 BACE1P56817 501 aa21.61■■□□□ 1.05
COMMD4-213ENST00000565834 GNL2Q13823 731 aaKnown RBP21.61■■□□□ 1.05
COMMD4-213ENST00000565834 SYDE2Q5VT97 1194 aa21.61■■□□□ 1.05
COMMD4-213ENST00000565834 WWC2Q6AWC2 1192 aa21.61■■□□□ 1.05
COMMD4-213ENST00000565834 MOB2Q70IA6 237 aa21.61■■□□□ 1.05
COMMD4-213ENST00000565834 SHISA4Q96DD7 197 aa21.61■■□□□ 1.05
COMMD4-213ENST00000565834 PHF20Q9BVI0 1012 aa21.61■■□□□ 1.05
COMMD4-213ENST00000565834 PNMA6FA0A0J9YX94 578 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 WDR46O15213 610 aaKnown RBP21.6■■□□□ 1.05
COMMD4-213ENST00000565834 CCDC148Q8NFR7 591 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 MTMR8Q96EF0 704 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 CHAMP1Q96JM3 812 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 ZNF408Q9H9D4 720 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 BARHL2Q9NY43 387 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.6■■□□□ 1.05
COMMD4-213ENST00000565834 C19orf81C9J6K1 198 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 hCG_1984214I3L0E3 225 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 ZBTB5O15062 677 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 MCM4P33991 863 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 BRAPQ7Z569 592 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 DIS3L2Q8IYB7 885 aaKnown RBP21.6■■□□□ 1.05
COMMD4-213ENST00000565834 FAM177A1Q8N128 213 aaPredicted RBP21.6■■□□□ 1.05
COMMD4-213ENST00000565834 ZNF713Q8N859 430 aaPredicted RBP21.6■■□□□ 1.05
COMMD4-213ENST00000565834 CHURC1Q8WUH1 139 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 AFG3L2Q9Y4W6 797 aa21.6■■□□□ 1.05
COMMD4-213ENST00000565834 PTPRFP10586 1907 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 KIF28PB7ZC32 967 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 STXBP3O00186 592 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 PLA2G6O60733 806 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 NLRP5P59047 1200 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 FAM160B2Q86V87 743 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 CCDC12Q8WUD4 166 aaPredicted RBP21.59■■□□□ 1.05
COMMD4-213ENST00000565834 ELP3Q9H9T3 547 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 BRMS1Q9HCU9 246 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 EMILIN3Q9NT22 766 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 FEM1BQ9UK73 627 aa21.59■■□□□ 1.05
COMMD4-213ENST00000565834 GOLGA6L22H0YM25 854 aa21.58■■□□□ 1.05
COMMD4-213ENST00000565834 CALML3P27482 149 aa21.58■■□□□ 1.05
COMMD4-213ENST00000565834 DNM1Q05193 864 aaKnown RBP21.58■■□□□ 1.05
COMMD4-213ENST00000565834 FMR1Q06787 632 aaKnown RBP eCLIP21.58■■□□□ 1.05
COMMD4-213ENST00000565834 CDC37Q16543 378 aaPredicted RBP21.58■■□□□ 1.05
COMMD4-213ENST00000565834 FAM173BQ6P4H8 233 aa21.58■■□□□ 1.05
COMMD4-213ENST00000565834 CLMNQ96JQ2 1002 aa21.58■■□□□ 1.05
COMMD4-213ENST00000565834 FOXP1Q9H334 677 aaPredicted RBP21.58■■□□□ 1.05
COMMD4-213ENST00000565834 VCAM1P19320 739 aa21.57■■□□□ 1.04
COMMD4-213ENST00000565834 NCLP19338 710 aaKnown RBP21.57■■□□□ 1.04
COMMD4-213ENST00000565834 U2AF2P26368 475 aaKnown RBP eCLIP21.57■■□□□ 1.04
COMMD4-213ENST00000565834 KRT2P35908 639 aa21.57■■□□□ 1.04
COMMD4-213ENST00000565834 HMGCS2P54868 508 aa21.57■■□□□ 1.04
COMMD4-213ENST00000565834 NAPAP54920 295 aa21.57■■□□□ 1.04
COMMD4-213ENST00000565834 DGKZQ13574 1117 aa21.57■■□□□ 1.04
COMMD4-213ENST00000565834 QRICH1Q2TAL8 776 aa21.57■■□□□ 1.04
COMMD4-213ENST00000565834 ERO1BQ86YB8 467 aa21.57■■□□□ 1.04
COMMD4-213ENST00000565834 RBM46Q8TBY0 533 aaKnown RBP21.57■■□□□ 1.04
COMMD4-213ENST00000565834 C12orf42Q96LP6 360 aa21.57■■□□□ 1.04
COMMD4-213ENST00000565834 PRR12Q9ULL5 1215 aa21.57■■□□□ 1.04
COMMD4-213ENST00000565834 BTBD18B2RXH4 712 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 PPATQ06203 517 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 CHADLQ6NUI6 762 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 TYW1BQ6NUM6 668 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 TMOD4Q9NZQ9 345 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 TRPM7Q96QT4 1865 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 DDX11L8A8MPP1 907 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 FKBP1BP68106 108 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 KRT85P78386 507 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 LDLRAD1Q5T700 205 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 NOSTRINQ8IVI9 506 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 CNKSR2Q8WXI2 1034 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 KIFC2Q96AC6 838 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 TANGO6Q9C0B7 1094 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 CNPY2Q9Y2B0 182 aa21.56■■□□□ 1.04
COMMD4-213ENST00000565834 SPDYE5A6NIY4 337 aa21.55■■□□□ 1.04
COMMD4-213ENST00000565834 UNCXA6NJT0 531 aa21.55■■□□□ 1.04
COMMD4-213ENST00000565834 PPP1R11O60927 126 aaPredicted RBP21.55■■□□□ 1.04
COMMD4-213ENST00000565834 NPY5RQ15761 445 aa21.55■■□□□ 1.04
COMMD4-213ENST00000565834 GALNT17Q6IS24 598 aa21.55■■□□□ 1.04
COMMD4-213ENST00000565834 PPP1R18Q6NYC8 613 aa21.55■■□□□ 1.04
COMMD4-213ENST00000565834 OXER1Q8TDS5 423 aa21.55■■□□□ 1.04
COMMD4-213ENST00000565834 COA7Q96BR5 231 aa21.55■■□□□ 1.04
COMMD4-213ENST00000565834 OTUD5Q96G74 571 aa21.55■■□□□ 1.04
COMMD4-213ENST00000565834 RPAP3Q9H6T3 665 aaPredicted RBP21.55■■□□□ 1.04
COMMD4-213ENST00000565834 PARP14Q460N5 1801 aa21.55■■□□□ 1.04
COMMD4-213ENST00000565834 NR5A1Q13285 461 aa21.54■■□□□ 1.04
COMMD4-213ENST00000565834 SH3D19Q5HYK7 790 aa21.54■■□□□ 1.04
COMMD4-213ENST00000565834 ZNF396Q96N95 335 aaPredicted RBP21.54■■□□□ 1.04
COMMD4-213ENST00000565834 ZMYND12Q9H0C1 365 aa21.54■■□□□ 1.04
COMMD4-213ENST00000565834 GBA2Q9HCG7 927 aaPredicted RBP21.54■■□□□ 1.04
COMMD4-213ENST00000565834 FBXO28Q9NVF7 368 aa21.54■■□□□ 1.04
COMMD4-213ENST00000565834 PCDHA4Q9UN74 947 aa21.54■■□□□ 1.04
COMMD4-213ENST00000565834 CELF2O95319 508 aaKnown RBP21.53■■□□□ 1.04
COMMD4-213ENST00000565834 SNAP25P60880 206 aa21.53■■□□□ 1.04
COMMD4-213ENST00000565834 MYSM1Q5VVJ2 828 aa21.53■■□□□ 1.04
COMMD4-213ENST00000565834 ATL3Q6DD88 541 aa21.53■■□□□ 1.04
COMMD4-213ENST00000565834 SAMD1Q6SPF0 538 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-213ENST00000565834 BLIDQ8IZY5 108 aa21.53■■□□□ 1.04
COMMD4-213ENST00000565834 DAGLBQ8NCG7 672 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms