RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 RNF208Q9H0X6 261 aa22.01■■□□□ 1.11
CMTM3-210ENST00000565666 HTTP42858 3142 aa22.01■■□□□ 1.11
CMTM3-210ENST00000565666 STRNO43815 780 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 CYP21A2P08686 494 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 ZKSCAN1P17029 563 aaPredicted RBP22■■□□□ 1.11
CMTM3-210ENST00000565666 COPB2P35606 906 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 SLC4A3P48751 1232 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 GRB14Q14449 540 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 RASGRP2Q7LDG7 609 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 CPXCR1Q8N123 301 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 REPS2Q8NFH8 660 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 DCAF4Q8WV16 495 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 TRIB2Q92519 343 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 MAP4K1Q92918 833 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 ZSWIM5Q9P217 1185 aa22■■□□□ 1.11
CMTM3-210ENST00000565666 ZNF214Q9UL59 606 aaPredicted RBP22■■□□□ 1.11
CMTM3-210ENST00000565666 RBM8AQ9Y5S9 174 aaKnown RBP22■■□□□ 1.11
CMTM3-210ENST00000565666 ZNF236Q9UL36 1845 aa21.99■■□□□ 1.11
CMTM3-210ENST00000565666 CDC45O75419 566 aa21.99■■□□□ 1.11
CMTM3-210ENST00000565666 SNRNP48Q6IEG0 339 aaKnown RBP21.99■■□□□ 1.11
CMTM3-210ENST00000565666 DPP9Q86TI2 863 aa21.99■■□□□ 1.11
CMTM3-210ENST00000565666 DGKHQ86XP1 1220 aa21.99■■□□□ 1.11
CMTM3-210ENST00000565666 ZSCAN10Q96SZ4 725 aaPredicted RBP21.99■■□□□ 1.11
CMTM3-210ENST00000565666 UBAC1Q9BSL1 405 aa21.99■■□□□ 1.11
CMTM3-210ENST00000565666 TEX13BQ9BXU2 312 aa21.99■■□□□ 1.11
CMTM3-210ENST00000565666 UNC93B1Q9H1C4 597 aa21.99■■□□□ 1.11
CMTM3-210ENST00000565666 ANO2Q9NQ90 1003 aa21.99■■□□□ 1.11
CMTM3-210ENST00000565666 FDX1P10109 184 aa21.98■■□□□ 1.11
CMTM3-210ENST00000565666 FCER1AP12319 257 aa21.98■■□□□ 1.11
CMTM3-210ENST00000565666 EN2P19622 333 aaPredicted RBP21.98■■□□□ 1.11
CMTM3-210ENST00000565666 ADORA2AP29274 412 aa21.98■■□□□ 1.11
CMTM3-210ENST00000565666 RALYLQ86SE5 291 aaKnown RBP21.98■■□□□ 1.11
CMTM3-210ENST00000565666 KAT14Q9H8E8 782 aa21.98■■□□□ 1.11
CMTM3-210ENST00000565666 SLC38A10Q9HBR0 1119 aa21.98■■□□□ 1.11
CMTM3-210ENST00000565666 RAVER2Q9HCJ3 691 aaKnown RBP21.98■■□□□ 1.11
CMTM3-210ENST00000565666 PLA2G6O60733 806 aa21.97■■□□□ 1.11
CMTM3-210ENST00000565666 CCL14Q16627 93 aa21.97■■□□□ 1.11
CMTM3-210ENST00000565666 MMP19Q99542 508 aa21.97■■□□□ 1.11
CMTM3-210ENST00000565666 LSG1Q9H089 658 aaKnown RBP21.97■■□□□ 1.11
CMTM3-210ENST00000565666 GPCPD1Q9NPB8 672 aa21.97■■□□□ 1.11
CMTM3-210ENST00000565666 SLC5A4Q9NY91 659 aa21.97■■□□□ 1.11
CMTM3-210ENST00000565666 TNKSO95271 1327 aa21.97■■□□□ 1.11
CMTM3-210ENST00000565666 FRMPD2Q68DX3 1309 aaPredicted RBP21.97■■□□□ 1.11
CMTM3-210ENST00000565666 PDHBP11177 359 aa21.96■■□□□ 1.11
CMTM3-210ENST00000565666 TRIM32Q13049 653 aa21.96■■□□□ 1.11
CMTM3-210ENST00000565666 ABRAQ8N0Z2 381 aa21.96■■□□□ 1.11
CMTM3-210ENST00000565666 NCOA7Q8NI08 942 aa21.96■■□□□ 1.11
CMTM3-210ENST00000565666 E7EWF7 191 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 ATP2A1O14983 1001 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 GJB1P08034 283 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 HOXC6P09630 235 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 OAZ1P54368 228 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 KCTD2Q14681 263 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 CYB5R4Q7L1T6 521 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 ENAHQ8N8S7 591 aaPredicted RBP21.95■■□□□ 1.1
CMTM3-210ENST00000565666 PNMA1Q8ND90 353 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 NPLOC4Q8TAT6 608 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 HMX1Q9NP08 348 aaPredicted RBP21.95■■□□□ 1.1
CMTM3-210ENST00000565666 PRR12Q9ULL5 1215 aa21.95■■□□□ 1.1
CMTM3-210ENST00000565666 PRKAR2AP13861 404 aaKnown RBP21.94■■□□□ 1.1
CMTM3-210ENST00000565666 SLC16A2P36021 539 aa21.94■■□□□ 1.1
CMTM3-210ENST00000565666 IFIT1BQ5T764 474 aaKnown RBP21.94■■□□□ 1.1
CMTM3-210ENST00000565666 MFSD14CQ5VZR4 134 aa21.94■■□□□ 1.1
CMTM3-210ENST00000565666 TTBK2Q6IQ55 1244 aa21.94■■□□□ 1.1
CMTM3-210ENST00000565666 ANKS1AQ92625 1134 aa21.94■■□□□ 1.1
CMTM3-210ENST00000565666 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.94■■□□□ 1.16e-8■■■■■ 50.5
CMTM3-210ENST00000565666 RIPK3Q9Y572 518 aa21.94■■□□□ 1.1
CMTM3-210ENST00000565666 TAF6LQ9Y6J9 622 aa21.94■■□□□ 1.1
CMTM3-210ENST00000565666 RPTORQ8N122 1335 aa21.94■■□□□ 1.1
CMTM3-210ENST00000565666 ZNFX1Q9P2E3 1918 aaKnown RBP21.94■■□□□ 1.1
CMTM3-210ENST00000565666 ERICH2A1L162 156 aa21.93■■□□□ 1.1
CMTM3-210ENST00000565666 SNAP25P60880 206 aa21.93■■□□□ 1.1
CMTM3-210ENST00000565666 ZNF543Q08ER8 600 aa21.93■■□□□ 1.1
CMTM3-210ENST00000565666 SYDE2Q5VT97 1194 aa21.93■■□□□ 1.1
CMTM3-210ENST00000565666 CCDC174Q6PII3 467 aa21.93■■□□□ 1.1
CMTM3-210ENST00000565666 U2AF1L4Q8WU68 220 aaKnown RBP21.93■■□□□ 1.1
CMTM3-210ENST00000565666 DEFB118Q96PH6 123 aa21.93■■□□□ 1.1
CMTM3-210ENST00000565666 COBLO75128 1261 aa21.92■■□□□ 1.1
CMTM3-210ENST00000565666 GJA8P48165 433 aa21.92■■□□□ 1.1
CMTM3-210ENST00000565666 CACNB2Q08289 660 aaPredicted RBP21.92■■□□□ 1.1
CMTM3-210ENST00000565666 BTNL9Q6UXG8 535 aa21.92■■□□□ 1.1
CMTM3-210ENST00000565666 STOX1Q6ZVD7 989 aa21.92■■□□□ 1.1
CMTM3-210ENST00000565666 HOMER2Q9NSB8 354 aa21.92■■□□□ 1.1
CMTM3-210ENST00000565666 FLRT1Q9NZU1 646 aa21.92■■□□□ 1.1
CMTM3-210ENST00000565666 FBXO40Q9UH90 709 aa21.92■■□□□ 1.1
CMTM3-210ENST00000565666 IFIT3O14879 490 aaKnown RBP21.91■■□□□ 1.1
CMTM3-210ENST00000565666 SLC27A2O14975 620 aa21.91■■□□□ 1.1
CMTM3-210ENST00000565666 PGK2P07205 417 aa21.91■■□□□ 1.1
CMTM3-210ENST00000565666 SNHG28P0DPA3 235 aa21.91■■□□□ 1.1
CMTM3-210ENST00000565666 SART3Q15020 963 aaKnown RBP21.91■■□□□ 1.1
CMTM3-210ENST00000565666 GPATCH4Q5T3I0 446 aaKnown RBP21.91■■□□□ 1.1
CMTM3-210ENST00000565666 MAP3K21Q5TCX8 1036 aa21.91■■□□□ 1.1
CMTM3-210ENST00000565666 CHST13Q8NET6 341 aa21.91■■□□□ 1.1
CMTM3-210ENST00000565666 DDX11Q96FC9 970 aa21.91■■□□□ 1.1
CMTM3-210ENST00000565666 PAK6Q9NQU5 681 aaPredicted RBP21.91■■□□□ 1.1
CMTM3-210ENST00000565666 PLXNA1Q9UIW2 1896 aa21.91■■□□□ 1.1
CMTM3-210ENST00000565666 KIAA0100Q14667 2235 aaKnown RBP21.91■■□□□ 1.1
CMTM3-210ENST00000565666 SGPL1O95470 568 aa21.9■■□□□ 1.1
CMTM3-210ENST00000565666 GOLGA8HP0CJ92 632 aa21.9■■□□□ 1.1
CMTM3-210ENST00000565666 NECTIN1Q15223 517 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms