RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 ATP2B2Q01814 1243 aa7.68□□□□□ -1.18
CHD9-214ENST00000565119 TMEM62Q0P6H9 643 aa7.68□□□□□ -1.18
CHD9-214ENST00000565119 LAPTM5Q13571 262 aa7.68□□□□□ -1.18
CHD9-214ENST00000565119 ZNF655Q8N720 491 aaPredicted RBP7.68□□□□□ -1.18
CHD9-214ENST00000565119 SPATA25Q9BR10 227 aa7.68□□□□□ -1.18
CHD9-214ENST00000565119 USP40Q9NVE5 1235 aa7.68□□□□□ -1.18
CHD9-214ENST00000565119 TNFRSF10DQ9UBN6 386 aa7.68□□□□□ -1.18
CHD9-214ENST00000565119 SRRDQ9UH36 339 aa7.68□□□□□ -1.18
CHD9-214ENST00000565119 TAF6LQ9Y6J9 622 aa7.68□□□□□ -1.18
CHD9-214ENST00000565119 SSU72P8A0A1W2PR75 194 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 SYPP08247 313 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 RPTNQ6XPR3 784 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 LIPIQ6XZB0 460 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 TMC3Q7Z5M5 1100 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 LSRQ86X29 649 aaPredicted RBP7.67□□□□□ -1.18
CHD9-214ENST00000565119 NLGN1Q8N2Q7 840 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 TNFRSF12AQ9NP84 129 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 KLHL3Q9UH77 587 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 TLR6Q9Y2C9 796 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 GPR55Q9Y2T6 319 aaPredicted RBP7.67□□□□□ -1.18
CHD9-214ENST00000565119 DUSP10Q9Y6W6 482 aa7.67□□□□□ -1.18
CHD9-214ENST00000565119 WTIPA6NIX2 430 aaPredicted RBP7.66□□□□□ -1.18
CHD9-214ENST00000565119 PRKCAP17252 672 aa7.66□□□□□ -1.18
CHD9-214ENST00000565119 SORCS2Q96PQ0 1159 aa7.66□□□□□ -1.18
CHD9-214ENST00000565119 KIF2CQ99661 725 aa7.66□□□□□ -1.18
CHD9-214ENST00000565119 SMPD4Q9NXE4 827 aa7.66□□□□□ -1.18
CHD9-214ENST00000565119 REV1Q9UBZ9 1251 aa7.66□□□□□ -1.18
CHD9-214ENST00000565119 DNAJA2O60884 412 aa7.65□□□□□ -1.18
CHD9-214ENST00000565119 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
CHD9-214ENST00000565119 CEBPAP49715 358 aaPredicted RBP7.65□□□□□ -1.18
CHD9-214ENST00000565119 CYP4F8P98187 520 aa7.65□□□□□ -1.18
CHD9-214ENST00000565119 PLEKHN1Q494U1 663 aaPredicted RBP7.65□□□□□ -1.18
CHD9-214ENST00000565119 FCRL2Q96LA5 508 aaPredicted RBP7.65□□□□□ -1.18
CHD9-214ENST00000565119 KRTAP3-1Q9BYR8 98 aa7.65□□□□□ -1.18
CHD9-214ENST00000565119 SUSD2Q9UGT4 822 aa7.65□□□□□ -1.18
CHD9-214ENST00000565119 PRR36Q9H6K5 1346 aa7.64□□□□□ -1.19
CHD9-214ENST00000565119 ITGB3P05106 788 aa7.64□□□□□ -1.19
CHD9-214ENST00000565119 EIF4BP23588 611 aaKnown RBP7.64□□□□□ -1.19
CHD9-214ENST00000565119 ZNF200P98182 395 aaPredicted RBP7.64□□□□□ -1.19
CHD9-214ENST00000565119 BNC2Q6ZN30 1099 aaPredicted RBP7.64□□□□□ -1.19
CHD9-214ENST00000565119 SLCO6A1Q86UG4 719 aa7.64□□□□□ -1.19
CHD9-214ENST00000565119 FNIP1Q8TF40 1166 aa7.64□□□□□ -1.19
CHD9-214ENST00000565119 FRMD6Q96NE9 622 aa7.64□□□□□ -1.19
CHD9-214ENST00000565119 MSL3P1P0C860 447 aa7.63□□□□□ -1.19
CHD9-214ENST00000565119 PFKLP17858 780 aa7.63□□□□□ -1.19
CHD9-214ENST00000565119 TRIM26Q12899 539 aaPredicted RBP7.63□□□□□ -1.19
CHD9-214ENST00000565119 SNW1Q13573 536 aaKnown RBP7.63□□□□□ -1.19
CHD9-214ENST00000565119 PHACTR4Q8IZ21 702 aa7.63□□□□□ -1.19
CHD9-214ENST00000565119 DDX1Q92499 740 aaKnown RBP7.63□□□□□ -1.19
CHD9-214ENST00000565119 SCAND2PQ9GZW5 306 aaPredicted RBP7.63□□□□□ -1.19
CHD9-214ENST00000565119 ACSL6Q9UKU0 697 aa7.63□□□□□ -1.19
CHD9-214ENST00000565119 FAM221AA4D161 298 aa7.62□□□□□ -1.19
CHD9-214ENST00000565119 C1QTNF3-AMACRE9PGA6 284 aa7.62□□□□□ -1.19
CHD9-214ENST00000565119 CNR2P34972 360 aa7.62□□□□□ -1.19
CHD9-214ENST00000565119 ZSCAN29Q8IWY8 852 aaPredicted RBP7.62□□□□□ -1.19
CHD9-214ENST00000565119 NUP43Q8NFH3 380 aa7.62□□□□□ -1.19
CHD9-214ENST00000565119 RBM15Q96T37 977 aaKnown RBP eCLIP7.62□□□□□ -1.19
CHD9-214ENST00000565119 ERVK13-1Q9NX77 482 aa7.62□□□□□ -1.19
CHD9-214ENST00000565119 FBLN1P23142 703 aa7.61□□□□□ -1.19
CHD9-214ENST00000565119 MAPKAPK2P49137 400 aa7.61□□□□□ -1.19
CHD9-214ENST00000565119 NBPF9Q3BBW0 867 aa7.61□□□□□ -1.19
CHD9-214ENST00000565119 ZC3H14Q6PJT7 736 aaKnown RBP7.61□□□□□ -1.19
CHD9-214ENST00000565119 SAPCD2Q86UD0 394 aa7.61□□□□□ -1.19
CHD9-214ENST00000565119 PHC3Q8NDX5 983 aa7.61□□□□□ -1.19
CHD9-214ENST00000565119 ZNF526Q8TF50 670 aaPredicted RBP7.61□□□□□ -1.19
CHD9-214ENST00000565119 ASB16Q96NS5 453 aa7.61□□□□□ -1.19
CHD9-214ENST00000565119 PRDM14Q9GZV8 571 aa7.61□□□□□ -1.19
CHD9-214ENST00000565119 PLA2G2DQ9UNK4 145 aa7.61□□□□□ -1.19
CHD9-214ENST00000565119 MINPP1Q9UNW1 487 aa7.61□□□□□ -1.19
CHD9-214ENST00000565119 SUPT5HO00267 1087 aaKnown RBP7.6□□□□□ -1.19
CHD9-214ENST00000565119 NOBOXO60393 691 aa7.6□□□□□ -1.19
CHD9-214ENST00000565119 HTR3BO95264 441 aa7.6□□□□□ -1.19
CHD9-214ENST00000565119 PRAMEF1O95521 474 aa7.6□□□□□ -1.19
CHD9-214ENST00000565119 BPNT1O95861 308 aa7.6□□□□□ -1.19
CHD9-214ENST00000565119 P4HBP07237 508 aaKnown RBP7.6□□□□□ -1.19
CHD9-214ENST00000565119 GNA15P30679 374 aa7.6□□□□□ -1.19
CHD9-214ENST00000565119 GBP1P32455 592 aa7.6□□□□□ -1.19
CHD9-214ENST00000565119 CPZQ66K79 652 aa7.6□□□□□ -1.19
CHD9-214ENST00000565119 CCDC84Q86UT8 332 aaPredicted RBP7.6□□□□□ -1.19
CHD9-214ENST00000565119 GNEQ9Y223 722 aaKnown RBP7.6□□□□□ -1.19
CHD9-214ENST00000565119 POLR3KQ9Y2Y1 108 aaPredicted RBP7.6□□□□□ -1.19
CHD9-214ENST00000565119 A0A1W2PQ45 241 aaPredicted RBP7.59□□□□□ -1.19
CHD9-214ENST00000565119 A0A1W2PQY0 241 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 SH3D21A4FU49 640 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 UBOX5O94941 541 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 LDHBP07195 334 aaKnown RBP7.59□□□□□ -1.19
CHD9-214ENST00000565119 ATF2P15336 505 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 HMGA2P52926 109 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 RNF4P78317 190 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 HTRA3P83110 453 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 FOXO4P98177 505 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 DLX2Q07687 328 aaPredicted RBP7.59□□□□□ -1.19
CHD9-214ENST00000565119 MEI1Q5TIA1 1274 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 IMPACTQ9P2X3 320 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 PMF1-BGLAPU3KQ54 211 aa7.59□□□□□ -1.19
CHD9-214ENST00000565119 RGS13O14921 159 aa7.58□□□□□ -1.2
CHD9-214ENST00000565119 ZNF20P17024 532 aa7.58□□□□□ -1.2
CHD9-214ENST00000565119 CHMP4BP1P59074 171 aa7.58□□□□□ -1.2
CHD9-214ENST00000565119 TARBP2Q15633 366 aaKnown RBP7.58□□□□□ -1.2
CHD9-214ENST00000565119 MENTQ9BUN1 341 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms