RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FERMT2Q96AC1 680 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 DDX4Q9NQI0 724 aaKnown RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 CHORDC1Q9UHD1 332 aaPredicted RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 TMEM150BA6NC51 233 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 ESPNB1AK53 854 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 TOM1O60784 492 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 PHACTR2O75167 634 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 PCCAP05165 728 aaPredicted RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 MMP10P09238 476 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 NAA16Q6N069 864 aaPredicted RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 ZNF34Q8IZ26 560 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 RPGRQ92834 1020 aaKnown RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 NLRP3Q96P20 1036 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 PSMB7Q99436 277 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 TDRD3Q9H7E2 651 aaKnown RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 CBX8Q9HC52 389 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 DUOX1Q9NRD9 1551 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 SPATA31A5Q5VU36 1347 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 SPATA31A7Q8IWB4 1347 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 HOXB7P09629 217 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 DYMQ7RTS9 669 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 GTF3C6Q969F1 213 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 VEZTQ9HBM0 779 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 DOT1LQ8TEK3 1739 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 TNKSO95271 1327 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CCT6AP40227 531 aaKnown RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 TFAP4Q01664 338 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 PPARAQ07869 468 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 MAP7Q14244 749 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 MED15Q96RN5 788 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 NPHP3-ACAD11A0A0J9YXS1 232 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CALM1P0DP23 149 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CALM2P0DP24 149 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CALM3P0DP25 149 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 HOXA13P31271 388 aaPredicted RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 CEP135Q66GS9 1140 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CTR9Q6PD62 1173 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 TELO2Q9Y4R8 837 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CEP83Q9Y592 693 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 PLCH1Q4KWH8 1693 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 GYS1P13807 737 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 KLK7P49862 253 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CCDC152Q4G0S7 254 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CCDC155Q8N6L0 562 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CNBD1Q8NA66 436 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 PPP1R16BQ96T49 567 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 HIBADHP31937 336 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 R3HDM1Q15032 1099 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 DHX32Q7L7V1 743 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 MYH14Q7Z406 1995 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 IPO5O00410 1097 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 CBX1P83916 185 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 MTF1Q14872 753 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 MFSD14BQ5SR56 506 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 IFIT1BQ5T764 474 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 SCAND2PQ9GZW5 306 aaPredicted RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 CENPHQ9H3R5 247 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 VPS37BQ9H9H4 285 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 MKNK2Q9HBH9 465 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 IL17RBQ9NRM6 502 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 GJA3Q9Y6H8 435 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 GCOM1H8Y6P7 765 aaPredicted RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 MEIS1O00470 390 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 MYZAPP0CAP1 466 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 CUL4BQ13620 913 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 PUM3Q15397 648 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 SPTY2D1Q68D10 685 aaPredicted RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 FLAD1Q8NFF5 587 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 LPIN2Q92539 896 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 STRBPQ96SI9 672 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 SRRTQ9BXP5 876 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 ZHX3Q9H4I2 956 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 ST7Q9NRC1 585 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 RBM28Q9NW13 759 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 LTBP1Q14766 1721 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 ZNF646O15015 1829 aaPredicted RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 GOLGA8CPA6NN73 597 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 SMTNL1A8MU46 457 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 MTA1Q13330 715 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 TXNRD1Q16881 649 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 ENAHQ8N8S7 591 aaPredicted RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 DESI2Q9BSY9 194 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 FAM217BQ9NTX9 383 aaPredicted RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 FEZ2Q9UHY8 353 aaPredicted RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 ZSCAN12O43309 604 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 GNAT2P19087 354 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 RPS8P62241 208 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 SNW1Q13573 536 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 LRRC41Q15345 812 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 APOA5Q6Q788 366 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 TBC1D5Q92609 795 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 VTI1AQ96AJ9 217 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 ZSCAN31Q96LW9 406 aaPredicted RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 GDAP1L1Q96MZ0 367 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 HSD3B7Q9H2F3 369 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 LY9Q9HBG7 655 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 NOL7Q9UMY1 257 aaKnown RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 MYCP01106 439 aaPredicted RBP3.77□□□□□ -1.81
CHD9-213ENST00000564845 SLC5A1P13866 664 aa3.77□□□□□ -1.81
CHD9-213ENST00000564845 STK38Q15208 465 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms